EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012691 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 16469 bases
Position: chrNHOQ01001560.1:1642596-1659064
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018782	tRNA_SAD	PF07973.14	1.1e-05	1	1
ENSGAFP00000018782	HGTP_anticodon	PF03129.20	7.7e-16	1	1
ENSGAFP00000018782	tRNA-synt_2b	PF00587.25	1.7e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000018961	-	2169	-	ENSGAFP00000018782	690 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012691's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012691's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012691	-	93	55.130	ENSGAFG00000009417	tarsl2	78	55.487
ENSGAFG00000012691	-	93	55.280	ENSGAFG00000017077	tars	97	55.124

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012691	-	95	54.204	ENSG00000185418	TARSL2	95	49.286	Homo_sapiens
ENSGAFG00000012691	-	62	79.529	ENSAPOG00000015706	-	100	79.529	Acanthochromis_polyacanthus
ENSGAFG00000012691	-	95	53.765	ENSAMEG00000003074	TARSL2	86	53.046	Ailuropoda_melanoleuca
ENSGAFG00000012691	-	64	89.819	ENSACIG00000007759	-	95	89.931	Amphilophus_citrinellus
ENSGAFG00000012691	-	62	85.280	ENSAOCG00000012359	-	99	85.280	Amphiprion_ocellaris
ENSGAFG00000012691	-	62	81.412	ENSAPEG00000007512	-	100	81.412	Amphiprion_percula
ENSGAFG00000012691	-	100	82.133	ENSATEG00000023568	-	100	82.133	Anabas_testudineus
ENSGAFG00000012691	-	95	54.985	ENSAPLG00000008485	TARSL2	92	54.834	Anas_platyrhynchos
ENSGAFG00000012691	-	94	41.578	ENSACAG00000000199	TARSL2	86	41.426	Anolis_carolinensis
ENSGAFG00000012691	-	96	51.857	ENSACAG00000003076	-	99	51.857	Anolis_carolinensis
ENSGAFG00000012691	-	96	50.370	ENSANAG00000020687	TARSL2	86	50.869	Aotus_nancymaae
ENSGAFG00000012691	-	100	82.133	ENSACLG00000020262	-	100	82.133	Astatotilapia_calliptera
ENSGAFG00000012691	-	98	72.083	ENSAMXG00000012533	-	98	72.083	Astyanax_mexicanus
ENSGAFG00000012691	-	95	51.874	ENSBTAG00000007651	TARSL2	83	51.652	Bos_taurus
ENSGAFG00000012691	-	95	63.317	ENSCJAG00000017350	TARSL2	77	63.317	Callithrix_jacchus
ENSGAFG00000012691	-	95	53.233	ENSCAFG00000010453	TARSL2	83	52.782	Canis_familiaris
ENSGAFG00000012691	-	96	52.749	ENSCAFG00020020868	TARSL2	97	55.482	Canis_lupus_dingo
ENSGAFG00000012691	-	83	51.877	ENSCHIG00000015264	TARSL2	81	51.536	Capra_hircus
ENSGAFG00000012691	-	95	52.402	ENSTSYG00000004538	TARSL2	95	52.102	Carlito_syrichta
ENSGAFG00000012691	-	93	45.884	ENSCAPG00000004815	TARSL2	98	45.579	Cavia_aperea
ENSGAFG00000012691	-	95	53.003	ENSCPOG00000008850	TARSL2	95	52.703	Cavia_porcellus
ENSGAFG00000012691	-	96	53.630	ENSCCAG00000030068	TARSL2	83	54.344	Cebus_capucinus
ENSGAFG00000012691	-	95	53.823	ENSCATG00000037383	TARSL2	86	53.373	Cercocebus_atys
ENSGAFG00000012691	-	95	52.853	ENSCLAG00000016873	TARSL2	87	52.553	Chinchilla_lanigera
ENSGAFG00000012691	-	95	53.673	ENSCSAG00000016828	TARSL2	83	53.223	Chlorocebus_sabaeus
ENSGAFG00000012691	-	89	52.640	ENSCHOG00000001319	TARSL2	96	52.640	Choloepus_hoffmanni
ENSGAFG00000012691	-	96	53.789	ENSCPBG00000010792	TARSL2	85	53.640	Chrysemys_picta_bellii
ENSGAFG00000012691	-	95	53.754	ENSCANG00000035438	TARSL2	93	53.303	Colobus_angolensis_palliatus
ENSGAFG00000012691	-	95	53.274	ENSCGRG00001020827	Tarsl2	84	52.827	Cricetulus_griseus_chok1gshd
ENSGAFG00000012691	-	95	53.534	ENSCGRG00000011398	Tarsl2	93	53.083	Cricetulus_griseus_crigri
ENSGAFG00000012691	-	99	78.324	ENSCSEG00000002562	-	99	85.446	Cynoglossus_semilaevis
ENSGAFG00000012691	-	62	94.200	ENSCVAG00000009253	-	100	94.200	Cyprinodon_variegatus
ENSGAFG00000012691	-	61	78.014	ENSDARG00000075385	LO017852.1	99	78.014	Danio_rerio
ENSGAFG00000012691	-	95	51.802	ENSDNOG00000046161	TARSL2	95	51.351	Dasypus_novemcinctus
ENSGAFG00000012691	-	95	53.695	ENSDORG00000009653	Tarsl2	95	53.394	Dipodomys_ordii
ENSGAFG00000012691	-	95	53.453	ENSEASG00005017718	TARSL2	83	53.003	Equus_asinus_asinus
ENSGAFG00000012691	-	95	53.604	ENSECAG00000024315	TARSL2	83	53.153	Equus_caballus
ENSGAFG00000012691	-	86	56.333	ENSEEUG00000014117	TARSL2	98	56.000	Erinaceus_europaeus
ENSGAFG00000012691	-	98	74.926	ENSELUG00000013552	-	98	74.926	Esox_lucius
ENSGAFG00000012691	-	95	53.904	ENSFCAG00000008836	TARSL2	82	54.487	Felis_catus
ENSGAFG00000012691	-	96	54.762	ENSFALG00000012444	TARSL2	91	54.762	Ficedula_albicollis
ENSGAFG00000012691	-	95	51.584	ENSFDAG00000002767	TARSL2	94	51.584	Fukomys_damarensis
ENSGAFG00000012691	-	64	93.228	ENSFHEG00000021877	-	81	93.228	Fundulus_heteroclitus
ENSGAFG00000012691	-	98	76.000	ENSGMOG00000006184	-	99	74.892	Gadus_morhua
ENSGAFG00000012691	-	96	53.214	ENSGALG00000043416	-	91	64.721	Gallus_gallus
ENSGAFG00000012691	-	97	54.118	ENSGALG00000003985	TARSL2	87	53.971	Gallus_gallus
ENSGAFG00000012691	-	100	81.159	ENSGACG00000011734	-	100	81.159	Gasterosteus_aculeatus
ENSGAFG00000012691	-	96	53.343	ENSGAGG00000010775	TARSL2	85	53.195	Gopherus_agassizii
ENSGAFG00000012691	-	95	54.054	ENSGGOG00000007839	TARSL2	86	53.604	Gorilla_gorilla
ENSGAFG00000012691	-	100	82.421	ENSHBUG00000003411	-	100	82.421	Haplochromis_burtoni
ENSGAFG00000012691	-	95	52.932	ENSHGLG00000011618	TARSL2	85	52.632	Heterocephalus_glaber_female
ENSGAFG00000012691	-	95	52.932	ENSHGLG00100016769	TARSL2	95	52.632	Heterocephalus_glaber_male
ENSGAFG00000012691	-	100	76.301	ENSHCOG00000014119	-	99	76.301	Hippocampus_comes
ENSGAFG00000012691	-	62	73.176	ENSIPUG00000000099	-	100	73.176	Ictalurus_punctatus
ENSGAFG00000012691	-	95	53.754	ENSSTOG00000032725	TARSL2	84	53.303	Ictidomys_tridecemlineatus
ENSGAFG00000012691	-	100	83.815	ENSKMAG00000001354	-	100	83.815	Kryptolebias_marmoratus
ENSGAFG00000012691	-	62	85.647	ENSLBEG00000026238	-	100	85.647	Labrus_bergylta
ENSGAFG00000012691	-	95	53.303	ENSLAFG00000011941	TARSL2	98	52.853	Loxodonta_africana
ENSGAFG00000012691	-	95	53.673	ENSMFAG00000001902	TARSL2	83	53.223	Macaca_fascicularis
ENSGAFG00000012691	-	95	53.823	ENSMMUG00000000278	TARSL2	83	53.373	Macaca_mulatta
ENSGAFG00000012691	-	95	53.673	ENSMNEG00000034952	TARSL2	83	53.223	Macaca_nemestrina
ENSGAFG00000012691	-	95	53.604	ENSMLEG00000035535	TARSL2	95	53.153	Mandrillus_leucophaeus
ENSGAFG00000012691	-	100	82.853	ENSMAMG00000015032	-	100	82.853	Mastacembelus_armatus
ENSGAFG00000012691	-	100	82.133	ENSMZEG00005015989	-	100	82.133	Maylandia_zebra
ENSGAFG00000012691	-	87	64.162	ENSMGAG00000004951	TARSL2	98	62.431	Meleagris_gallopavo
ENSGAFG00000012691	-	86	61.680	ENSMAUG00000015756	Tarsl2	82	61.680	Mesocricetus_auratus
ENSGAFG00000012691	-	96	52.889	ENSMICG00000013039	TARSL2	98	52.444	Microcebus_murinus
ENSGAFG00000012691	-	95	53.985	ENSMOCG00000014909	Tarsl2	84	53.534	Microtus_ochrogaster
ENSGAFG00000012691	-	64	85.194	ENSMMOG00000016135	-	100	85.194	Mola_mola
ENSGAFG00000012691	-	95	53.313	ENSMODG00000011941	TARSL2	83	53.163	Monodelphis_domestica
ENSGAFG00000012691	-	99	78.571	ENSMALG00000007340	-	99	78.571	Monopterus_albus
ENSGAFG00000012691	-	95	53.383	MGP_CAROLIEiJ_G0029834	Tarsl2	84	52.932	Mus_caroli
ENSGAFG00000012691	-	95	53.083	ENSMUSG00000030515	Tarsl2	84	52.632	Mus_musculus
ENSGAFG00000012691	-	95	53.233	MGP_PahariEiJ_G0013059	Tarsl2	84	52.782	Mus_pahari
ENSGAFG00000012691	-	95	54.354	ENSMPUG00000011032	TARSL2	85	53.904	Mustela_putorius_furo
ENSGAFG00000012691	-	95	52.402	ENSMLUG00000012870	-	83	52.102	Myotis_lucifugus
ENSGAFG00000012691	-	80	53.464	ENSMLUG00000024482	-	94	53.108	Myotis_lucifugus
ENSGAFG00000012691	-	95	53.083	ENSNGAG00000020451	Tarsl2	84	52.782	Nannospalax_galili
ENSGAFG00000012691	-	96	84.314	ENSNBRG00000003429	-	97	84.314	Neolamprologus_brichardi
ENSGAFG00000012691	-	96	53.423	ENSNLEG00000000541	TARSL2	85	52.976	Nomascus_leucogenys
ENSGAFG00000012691	-	81	49.823	ENSMEUG00000002935	TARSL2	70	49.645	Notamacropus_eugenii
ENSGAFG00000012691	-	72	46.400	ENSOPRG00000002689	-	62	46.400	Ochotona_princeps
ENSGAFG00000012691	-	96	52.749	ENSODEG00000014454	TARSL2	85	52.452	Octodon_degus
ENSGAFG00000012691	-	97	83.533	ENSONIG00000006402	-	100	83.533	Oreochromis_niloticus
ENSGAFG00000012691	-	95	52.417	ENSOANG00000013263	TARSL2	98	52.266	Ornithorhynchus_anatinus
ENSGAFG00000012691	-	96	53.412	ENSOCUG00000010740	TARSL2	94	53.116	Oryctolagus_cuniculus
ENSGAFG00000012691	-	100	78.398	ENSORLG00000010391	-	100	78.398	Oryzias_latipes
ENSGAFG00000012691	-	100	79.595	ENSORLG00020008928	-	100	79.595	Oryzias_latipes_hni
ENSGAFG00000012691	-	100	79.450	ENSORLG00015014897	-	100	79.450	Oryzias_latipes_hsok
ENSGAFG00000012691	-	100	80.058	ENSOMEG00000009022	-	100	80.058	Oryzias_melastigma
ENSGAFG00000012691	-	95	52.259	ENSOGAG00000014311	TARSL2	82	51.807	Otolemur_garnettii
ENSGAFG00000012691	-	95	51.502	ENSOARG00000016573	TARSL2	94	51.201	Ovis_aries
ENSGAFG00000012691	-	95	53.904	ENSPPAG00000040066	TARSL2	96	53.453	Pan_paniscus
ENSGAFG00000012691	-	95	53.604	ENSPPRG00000017275	TARSL2	83	54.167	Panthera_pardus
ENSGAFG00000012691	-	95	53.604	ENSPTIG00000015184	TARSL2	83	53.153	Panthera_tigris_altaica
ENSGAFG00000012691	-	95	54.204	ENSPTRG00000007516	TARSL2	83	53.754	Pan_troglodytes
ENSGAFG00000012691	-	95	51.917	ENSPANG00000022401	TARSL2	83	51.475	Papio_anubis
ENSGAFG00000012691	-	97	68.703	ENSPKIG00000010658	-	99	75.529	Paramormyrops_kingsleyae
ENSGAFG00000012691	-	83	55.923	ENSPSIG00000008419	TARSL2	99	55.749	Pelodiscus_sinensis
ENSGAFG00000012691	-	63	84.332	ENSPMGG00000007785	-	99	84.332	Periophthalmus_magnuspinnatus
ENSGAFG00000012691	-	95	53.083	ENSPEMG00000019852	Tarsl2	90	52.632	Peromyscus_maniculatus_bairdii
ENSGAFG00000012691	-	95	53.163	ENSPCIG00000022481	TARSL2	82	53.012	Phascolarctos_cinereus
ENSGAFG00000012691	-	96	94.887	ENSPFOG00000013444	-	100	94.286	Poecilia_formosa
ENSGAFG00000012691	-	100	95.507	ENSPLAG00000018145	-	100	95.507	Poecilia_latipinna
ENSGAFG00000012691	-	100	95.362	ENSPMEG00000023625	-	100	95.362	Poecilia_mexicana
ENSGAFG00000012691	-	62	94.118	ENSPREG00000017312	-	100	94.118	Poecilia_reticulata
ENSGAFG00000012691	-	88	62.218	ENSPPYG00000006830	TARSL2	81	62.218	Pongo_abelii
ENSGAFG00000012691	-	87	52.059	ENSPCAG00000011132	TARSL2	76	51.480	Procavia_capensis
ENSGAFG00000012691	-	96	39.439	ENSPCOG00000026095	TARSL2	82	39.291	Propithecus_coquereli
ENSGAFG00000012691	-	96	40.299	ENSPVAG00000012240	TARSL2	84	39.851	Pteropus_vampyrus
ENSGAFG00000012691	-	100	82.277	ENSPNYG00000004232	-	100	82.277	Pundamilia_nyererei
ENSGAFG00000012691	-	98	72.700	ENSPNAG00000002308	-	97	72.700	Pygocentrus_nattereri
ENSGAFG00000012691	-	60	48.104	ENSRNOG00000024460	Tarsl2	76	47.393	Rattus_norvegicus
ENSGAFG00000012691	-	95	53.754	ENSRBIG00000035707	TARSL2	86	53.303	Rhinopithecus_bieti
ENSGAFG00000012691	-	95	53.604	ENSRROG00000029492	TARSL2	86	53.153	Rhinopithecus_roxellana
ENSGAFG00000012691	-	96	53.481	ENSSBOG00000029807	TARSL2	97	53.037	Saimiri_boliviensis_boliviensis
ENSGAFG00000012691	-	95	53.684	ENSSHAG00000010266	TARSL2	88	53.534	Sarcophilus_harrisii
ENSGAFG00000012691	-	97	69.747	ENSSFOG00015022086	tars2	97	69.747	Scleropages_formosus
ENSGAFG00000012691	-	97	81.381	ENSSMAG00000015682	-	97	81.381	Scophthalmus_maximus
ENSGAFG00000012691	-	62	89.535	ENSSDUG00000007180	-	99	89.535	Seriola_dumerili
ENSGAFG00000012691	-	62	90.141	ENSSLDG00000015367	-	99	90.141	Seriola_lalandi_dorsalis
ENSGAFG00000012691	-	59	68.148	ENSSPUG00000001523	TARSL2	98	65.802	Sphenodon_punctatus
ENSGAFG00000012691	-	100	77.971	ENSSPAG00000018887	-	100	77.971	Stegastes_partitus
ENSGAFG00000012691	-	88	53.247	ENSSSCG00000005781	TARSL2	95	52.126	Sus_scrofa
ENSGAFG00000012691	-	61	60.284	ENSTGUG00000004602	-	98	60.142	Taeniopygia_guttata
ENSGAFG00000012691	-	95	54.449	ENSTGUG00000005726	TARSL2	98	54.449	Taeniopygia_guttata
ENSGAFG00000012691	-	62	88.498	ENSTRUG00000015004	-	99	88.498	Takifugu_rubripes
ENSGAFG00000012691	-	97	74.819	ENSTNIG00000008060	-	98	74.674	Tetraodon_nigroviridis
ENSGAFG00000012691	-	71	60.282	ENSTBEG00000001134	-	73	60.282	Tupaia_belangeri
ENSGAFG00000012691	-	95	51.802	ENSTTRG00000016207	TARSL2	95	51.502	Tursiops_truncatus
ENSGAFG00000012691	-	95	53.604	ENSUMAG00000024371	TARSL2	99	56.732	Ursus_maritimus
ENSGAFG00000012691	-	95	53.233	ENSVVUG00000014742	TARSL2	96	52.782	Vulpes_vulpes
ENSGAFG00000012691	-	65	97.118	ENSXCOG00000019508	-	97	98.077	Xiphophorus_couchianus
ENSGAFG00000012691	-	100	96.667	ENSXMAG00000016382	-	100	96.667	Xiphophorus_maculatus