EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012801 (Gene tree)
Gene ID: -
Gene Symbol: gatc
Alias: si:rp71-1c23.3
Full Name: glutamyl-tRNA amidotransferase subunit C
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 6536 bases
Position: chrNHOQ01002094.1:7414453-7420988
Accession: ZDB-GENE-060526-381
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018949	Glu-tRNAGln	PF02686.15	5e-10	1	1
ENSGAFP00000018954	Glu-tRNAGln	PF02686.15	6.7e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019127	-	1334	-	ENSGAFP00000018949	158 (aa)	-	-
ENSGAFT00000019133	-	480	-	ENSGAFP00000018954	159 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012801's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012801's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012801	gatc	65	60.194	ENSG00000257218	GATC	100	68.085	Homo_sapiens
ENSGAFG00000012801	gatc	66	61.538	ENSAMEG00000013298	-	76	61.538	Ailuropoda_melanoleuca
ENSGAFG00000012801	gatc	63	80.000	ENSACIG00000016853	gatc	78	75.000	Amphilophus_citrinellus
ENSGAFG00000012801	gatc	67	86.792	ENSAOCG00000014641	gatc	85	86.792	Amphiprion_ocellaris
ENSGAFG00000012801	gatc	82	78.462	ENSAPEG00000023411	gatc	67	78.462	Amphiprion_percula
ENSGAFG00000012801	gatc	68	81.481	ENSATEG00000009237	gatc	89	81.481	Anabas_testudineus
ENSGAFG00000012801	gatc	54	78.824	ENSACAG00000002868	-	68	75.000	Anolis_carolinensis
ENSGAFG00000012801	gatc	65	59.223	ENSANAG00000034389	-	76	59.223	Aotus_nancymaae
ENSGAFG00000012801	gatc	82	76.154	ENSACLG00000026251	gatc	68	76.154	Astatotilapia_calliptera
ENSGAFG00000012801	gatc	72	81.416	ENSAMXG00000004252	gatc	54	80.342	Astyanax_mexicanus
ENSGAFG00000012801	gatc	66	57.692	ENSBTAG00000012791	GATC	78	56.604	Bos_taurus
ENSGAFG00000012801	gatc	69	36.697	WBGene00013433	Y66D12A.7	62	36.697	Caenorhabditis_elegans
ENSGAFG00000012801	gatc	65	59.223	ENSCJAG00000001183	-	57	59.223	Callithrix_jacchus
ENSGAFG00000012801	gatc	66	61.538	ENSCAFG00000010311	-	81	58.772	Canis_familiaris
ENSGAFG00000012801	gatc	66	61.538	ENSCAFG00020020606	-	81	58.772	Canis_lupus_dingo
ENSGAFG00000012801	gatc	66	57.692	ENSCHIG00000019423	-	78	56.604	Capra_hircus
ENSGAFG00000012801	gatc	69	56.757	ENSTSYG00000006845	-	82	56.757	Carlito_syrichta
ENSGAFG00000012801	gatc	58	63.043	ENSCPOG00000026436	-	63	63.043	Cavia_porcellus
ENSGAFG00000012801	gatc	65	59.223	ENSCCAG00000022235	-	76	59.223	Cebus_capucinus
ENSGAFG00000012801	gatc	65	60.194	ENSCATG00000038807	GATC	76	60.194	Cercocebus_atys
ENSGAFG00000012801	gatc	68	55.046	ENSCLAG00000011015	-	67	55.046	Chinchilla_lanigera
ENSGAFG00000012801	gatc	59	62.766	ENSCSAG00000002259	GATC	71	61.458	Chlorocebus_sabaeus
ENSGAFG00000012801	gatc	63	61.000	ENSCHOG00000009235	-	74	61.000	Choloepus_hoffmanni
ENSGAFG00000012801	gatc	70	62.727	ENSCPBG00000011342	-	58	62.727	Chrysemys_picta_bellii
ENSGAFG00000012801	gatc	66	59.615	ENSCANG00000031071	GATC	76	59.615	Colobus_angolensis_palliatus
ENSGAFG00000012801	gatc	70	54.054	ENSCGRG00001019220	-	69	54.054	Cricetulus_griseus_chok1gshd
ENSGAFG00000012801	gatc	70	54.054	ENSCGRG00000004184	-	69	54.054	Cricetulus_griseus_crigri
ENSGAFG00000012801	gatc	78	63.710	ENSCSEG00000016618	-	66	68.142	Cynoglossus_semilaevis
ENSGAFG00000012801	gatc	77	79.508	ENSCSEG00000007798	gatc	61	79.508	Cynoglossus_semilaevis
ENSGAFG00000012801	gatc	82	86.364	ENSCVAG00000004364	gatc	70	86.364	Cyprinodon_variegatus
ENSGAFG00000012801	gatc	77	72.727	ENSDARG00000056855	gatc	66	72.727	Danio_rerio
ENSGAFG00000012801	gatc	65	57.009	ENSDNOG00000012593	-	63	56.731	Dasypus_novemcinctus
ENSGAFG00000012801	gatc	72	42.478	FBgn0064115	GatC	76	42.478	Drosophila_melanogaster
ENSGAFG00000012801	gatc	63	50.000	ENSETEG00000002604	-	74	50.000	Echinops_telfairi
ENSGAFG00000012801	gatc	68	48.598	ENSEBUG00000008772	gatc	78	41.727	Eptatretus_burgeri
ENSGAFG00000012801	gatc	66	62.500	ENSECAG00000011118	-	76	62.500	Equus_caballus
ENSGAFG00000012801	gatc	59	58.511	ENSEEUG00000011638	-	70	58.511	Erinaceus_europaeus
ENSGAFG00000012801	gatc	74	69.421	ENSELUG00000012608	gatc	73	74.000	Esox_lucius
ENSGAFG00000012801	gatc	66	60.577	ENSFCAG00000038718	-	76	60.577	Felis_catus
ENSGAFG00000012801	gatc	82	53.077	ENSFALG00000007564	-	81	53.077	Ficedula_albicollis
ENSGAFG00000012801	gatc	67	62.264	ENSFDAG00000018720	-	78	62.264	Fukomys_damarensis
ENSGAFG00000012801	gatc	82	90.698	ENSFHEG00000014992	GATC	69	90.698	Fundulus_heteroclitus
ENSGAFG00000012801	gatc	77	68.852	ENSGMOG00000008742	gatc	75	68.852	Gadus_morhua
ENSGAFG00000012801	gatc	56	62.921	ENSGALG00000007195	-	74	56.731	Gallus_gallus
ENSGAFG00000012801	gatc	91	71.329	ENSGACG00000008973	gatc	74	71.329	Gasterosteus_aculeatus
ENSGAFG00000012801	gatc	70	63.636	ENSGAGG00000016018	-	60	63.636	Gopherus_agassizii
ENSGAFG00000012801	gatc	60	61.053	ENSGGOG00000026821	GATC	74	61.053	Gorilla_gorilla
ENSGAFG00000012801	gatc	82	75.385	ENSHBUG00000006827	gatc	68	75.385	Haplochromis_burtoni
ENSGAFG00000012801	gatc	72	55.652	ENSHGLG00000011394	GATC	84	55.652	Heterocephalus_glaber_female
ENSGAFG00000012801	gatc	72	53.913	ENSHGLG00100018850	-	83	53.913	Heterocephalus_glaber_male
ENSGAFG00000012801	gatc	70	75.455	ENSHCOG00000009209	gatc	87	75.455	Hippocampus_comes
ENSGAFG00000012801	gatc	70	79.091	ENSIPUG00000023072	gatc	59	71.654	Ictalurus_punctatus
ENSGAFG00000012801	gatc	78	50.400	ENSSTOG00000025740	-	69	60.952	Ictidomys_tridecemlineatus
ENSGAFG00000012801	gatc	63	58.000	ENSJJAG00000000369	Gatc	63	58.000	Jaculus_jaculus
ENSGAFG00000012801	gatc	70	80.180	ENSKMAG00000016476	gatc	85	80.180	Kryptolebias_marmoratus
ENSGAFG00000012801	gatc	78	78.049	ENSLBEG00000007603	gatc	68	78.049	Labrus_bergylta
ENSGAFG00000012801	gatc	80	58.730	ENSLACG00000018239	-	65	58.730	Latimeria_chalumnae
ENSGAFG00000012801	gatc	70	72.727	ENSLOCG00000004056	gatc	59	72.727	Lepisosteus_oculatus
ENSGAFG00000012801	gatc	58	65.934	ENSLAFG00000006384	-	68	58.654	Loxodonta_africana
ENSGAFG00000012801	gatc	65	60.194	ENSMFAG00000034197	GATC	76	60.194	Macaca_fascicularis
ENSGAFG00000012801	gatc	65	60.194	ENSMMUG00000046665	GATC	76	60.194	Macaca_mulatta
ENSGAFG00000012801	gatc	65	60.194	ENSMNEG00000034653	GATC	76	60.194	Macaca_nemestrina
ENSGAFG00000012801	gatc	82	49.242	ENSMLEG00000039862	GATC	93	49.242	Mandrillus_leucophaeus
ENSGAFG00000012801	gatc	83	78.626	ENSMAMG00000015851	gatc	71	79.070	Mastacembelus_armatus
ENSGAFG00000012801	gatc	82	76.154	ENSMZEG00005016072	gatc	68	76.154	Maylandia_zebra
ENSGAFG00000012801	gatc	74	55.085	ENSMGAG00000008733	-	84	65.169	Meleagris_gallopavo
ENSGAFG00000012801	gatc	59	62.766	ENSMAUG00000012756	Gatc	61	62.766	Mesocricetus_auratus
ENSGAFG00000012801	gatc	69	57.658	ENSMICG00000008669	-	82	57.658	Microcebus_murinus
ENSGAFG00000012801	gatc	85	46.715	ENSMOCG00000005051	Gatc	88	46.715	Microtus_ochrogaster
ENSGAFG00000012801	gatc	75	77.119	ENSMMOG00000017695	gatc	79	83.158	Mola_mola
ENSGAFG00000012801	gatc	64	60.396	ENSMODG00000003152	-	77	60.396	Monodelphis_domestica
ENSGAFG00000012801	gatc	70	54.054	MGP_CAROLIEiJ_G0027623	Gatc	69	54.054	Mus_caroli
ENSGAFG00000012801	gatc	59	61.702	ENSMUSG00000029536	Gatc	61	61.702	Mus_musculus
ENSGAFG00000012801	gatc	58	61.538	MGP_PahariEiJ_G0024203	Gatc	59	61.538	Mus_pahari
ENSGAFG00000012801	gatc	59	60.638	MGP_SPRETEiJ_G0028621	Gatc	61	60.638	Mus_spretus
ENSGAFG00000012801	gatc	66	61.538	ENSMPUG00000003183	-	81	59.091	Mustela_putorius_furo
ENSGAFG00000012801	gatc	63	58.586	ENSMLUG00000010341	-	98	58.586	Myotis_lucifugus
ENSGAFG00000012801	gatc	61	60.825	ENSNGAG00000004734	Gatc	63	60.825	Nannospalax_galili
ENSGAFG00000012801	gatc	83	75.573	ENSNBRG00000007810	gatc	70	75.573	Neolamprologus_brichardi
ENSGAFG00000012801	gatc	69	57.798	ENSNLEG00000015651	GATC	80	57.798	Nomascus_leucogenys
ENSGAFG00000012801	gatc	62	60.204	ENSMEUG00000004064	-	79	60.204	Notamacropus_eugenii
ENSGAFG00000012801	gatc	82	50.758	ENSOPRG00000004226	-	93	50.758	Ochotona_princeps
ENSGAFG00000012801	gatc	67	56.604	ENSODEG00000005919	-	73	56.604	Octodon_degus
ENSGAFG00000012801	gatc	70	80.531	ENSONIG00000013444	gatc	78	80.531	Oreochromis_niloticus
ENSGAFG00000012801	gatc	65	60.194	ENSOCUG00000009867	-	76	60.194	Oryctolagus_cuniculus
ENSGAFG00000012801	gatc	65	81.373	ENSORLG00000007156	gatc	84	81.373	Oryzias_latipes
ENSGAFG00000012801	gatc	78	77.236	ENSORLG00020014991	gatc	65	77.236	Oryzias_latipes_hni
ENSGAFG00000012801	gatc	78	77.236	ENSORLG00015003450	gatc	65	77.236	Oryzias_latipes_hsok
ENSGAFG00000012801	gatc	78	76.423	ENSOMEG00000002280	gatc	66	76.423	Oryzias_melastigma
ENSGAFG00000012801	gatc	63	59.000	ENSOGAG00000003850	-	92	59.000	Otolemur_garnettii
ENSGAFG00000012801	gatc	73	53.719	ENSOARG00000012338	-	94	53.719	Ovis_aries
ENSGAFG00000012801	gatc	65	60.194	ENSPPAG00000029164	GATC	76	60.194	Pan_paniscus
ENSGAFG00000012801	gatc	66	60.577	ENSPPRG00000000929	-	76	60.577	Panthera_pardus
ENSGAFG00000012801	gatc	66	60.577	ENSPTIG00000009889	-	76	60.577	Panthera_tigris_altaica
ENSGAFG00000012801	gatc	65	60.194	ENSPTRG00000049887	GATC	76	60.194	Pan_troglodytes
ENSGAFG00000012801	gatc	65	60.194	ENSPANG00000033975	GATC	76	60.194	Papio_anubis
ENSGAFG00000012801	gatc	74	73.504	ENSPKIG00000024856	gatc	60	73.504	Paramormyrops_kingsleyae
ENSGAFG00000012801	gatc	70	61.261	ENSPSIG00000011112	-	95	61.261	Pelodiscus_sinensis
ENSGAFG00000012801	gatc	74	77.778	ENSPMGG00000018829	gatc	74	77.778	Periophthalmus_magnuspinnatus
ENSGAFG00000012801	gatc	70	55.856	ENSPEMG00000000665	Gatc	69	55.856	Peromyscus_maniculatus_bairdii
ENSGAFG00000012801	gatc	73	53.782	ENSPCIG00000025999	-	77	53.782	Phascolarctos_cinereus
ENSGAFG00000012801	gatc	82	95.349	ENSPFOG00000011603	gatc	70	95.349	Poecilia_formosa
ENSGAFG00000012801	gatc	82	94.574	ENSPLAG00000002471	gatc	70	94.574	Poecilia_latipinna
ENSGAFG00000012801	gatc	82	94.574	ENSPMEG00000020958	gatc	70	94.574	Poecilia_mexicana
ENSGAFG00000012801	gatc	59	95.789	ENSPREG00000022256	gatc	82	80.328	Poecilia_reticulata
ENSGAFG00000012801	gatc	61	61.856	ENSPPYG00000005030	GATC	71	61.856	Pongo_abelii
ENSGAFG00000012801	gatc	76	52.893	ENSPCAG00000013864	-	89	52.893	Procavia_capensis
ENSGAFG00000012801	gatc	70	51.351	ENSPCOG00000015558	-	86	51.351	Propithecus_coquereli
ENSGAFG00000012801	gatc	68	55.963	ENSPCOG00000009493	-	84	55.963	Propithecus_coquereli
ENSGAFG00000012801	gatc	69	58.559	ENSPVAG00000002228	-	82	58.559	Pteropus_vampyrus
ENSGAFG00000012801	gatc	82	75.385	ENSPNYG00000016015	gatc	68	75.385	Pundamilia_nyererei
ENSGAFG00000012801	gatc	70	78.182	ENSPNAG00000001239	gatc	54	73.333	Pygocentrus_nattereri
ENSGAFG00000012801	gatc	66	58.095	ENSRNOG00000001161	Gatc	68	58.095	Rattus_norvegicus
ENSGAFG00000012801	gatc	61	61.856	ENSRNOG00000045621	Gatc	63	61.856	Rattus_norvegicus
ENSGAFG00000012801	gatc	65	59.223	ENSRBIG00000033363	GATC	76	59.223	Rhinopithecus_bieti
ENSGAFG00000012801	gatc	65	59.223	ENSRROG00000042802	GATC	76	59.223	Rhinopithecus_roxellana
ENSGAFG00000012801	gatc	68	57.273	ENSSBOG00000033750	-	81	57.273	Saimiri_boliviensis_boliviensis
ENSGAFG00000012801	gatc	60	61.458	ENSSHAG00000005745	-	91	61.458	Sarcophilus_harrisii
ENSGAFG00000012801	gatc	72	76.316	ENSSFOG00015002508	gatc	72	76.316	Scleropages_formosus
ENSGAFG00000012801	gatc	75	83.898	ENSSMAG00000014280	gatc	66	83.898	Scophthalmus_maximus
ENSGAFG00000012801	gatc	81	79.688	ENSSDUG00000012206	gatc	66	79.688	Seriola_dumerili
ENSGAFG00000012801	gatc	81	78.125	ENSSLDG00000025159	gatc	65	78.125	Seriola_lalandi_dorsalis
ENSGAFG00000012801	gatc	70	59.091	ENSSPUG00000015693	-	70	62.887	Sphenodon_punctatus
ENSGAFG00000012801	gatc	78	80.488	ENSSPAG00000011860	gatc	64	80.488	Stegastes_partitus
ENSGAFG00000012801	gatc	61	65.979	ENSSSCG00000032747	-	78	59.813	Sus_scrofa
ENSGAFG00000012801	gatc	65	62.136	ENSTGUG00000009561	-	95	62.136	Taeniopygia_guttata
ENSGAFG00000012801	gatc	75	81.356	ENSTRUG00000021596	gatc	60	81.356	Takifugu_rubripes
ENSGAFG00000012801	gatc	78	76.423	ENSTNIG00000015879	gatc	59	76.423	Tetraodon_nigroviridis
ENSGAFG00000012801	gatc	66	60.577	ENSTTRG00000000144	GATC	78	59.434	Tursiops_truncatus
ENSGAFG00000012801	gatc	72	55.652	ENSUAMG00000015523	-	85	55.652	Ursus_americanus
ENSGAFG00000012801	gatc	66	61.538	ENSVVUG00000021055	-	81	58.772	Vulpes_vulpes
ENSGAFG00000012801	gatc	59	97.849	ENSXCOG00000017087	gatc	74	93.069	Xiphophorus_couchianus
ENSGAFG00000012801	gatc	81	98.438	ENSXMAG00000018267	gatc	69	98.438	Xiphophorus_maculatus