EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000012806 (Gene tree)
Gene ID: -
Gene Symbol: pdcd11
Alias: cb680|im:7148359|sb:cb680|wu:fc68c10
Full Name: programmed cell death 11
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 16804 bases
Position: chrNHOQ01002459.1:1201074-1217877
Accession: ZDB-GENE-030131-4076
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018987	Suf	PF05843.14	8.2e-12	1	1
ENSGAFP00000018987	S1	PF00575.23	9e-50	1	4
ENSGAFP00000018987	S1	PF00575.23	9e-50	2	4
ENSGAFP00000018987	S1	PF00575.23	9e-50	3	4
ENSGAFP00000018987	S1	PF00575.23	9e-50	4	4
ENSGAFP00000019042	S1	PF00575.23	3.4e-41	1	3
ENSGAFP00000019042	S1	PF00575.23	3.4e-41	2	3
ENSGAFP00000019042	S1	PF00575.23	3.4e-41	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019221	-	4443	-	ENSGAFP00000019042	1480 (aa)	-	-
ENSGAFT00000019166	-	5397	-	ENSGAFP00000018987	1798 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012806's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012806's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012806	pdcd11	99	43.120	ENSG00000148843	PDCD11	99	43.030	Homo_sapiens
ENSGAFG00000012806	pdcd11	100	66.109	ENSAPOG00000015629	pdcd11	100	66.261	Acanthochromis_polyacanthus
ENSGAFG00000012806	pdcd11	99	43.551	ENSAMEG00000017935	PDCD11	99	43.920	Ailuropoda_melanoleuca
ENSGAFG00000012806	pdcd11	51	61.530	ENSACIG00000006458	-	98	64.381	Amphilophus_citrinellus
ENSGAFG00000012806	pdcd11	100	76.580	ENSAOCG00000015287	pdcd11	96	76.580	Amphiprion_ocellaris
ENSGAFG00000012806	pdcd11	54	65.538	ENSAPEG00000020240	pdcd11	98	65.538	Amphiprion_percula
ENSGAFG00000012806	pdcd11	99	66.059	ENSATEG00000021043	pdcd11	99	65.971	Anabas_testudineus
ENSGAFG00000012806	pdcd11	99	46.066	ENSAPLG00000010301	PDCD11	98	46.230	Anas_platyrhynchos
ENSGAFG00000012806	pdcd11	99	50.474	ENSACAG00000004796	PDCD11	94	50.851	Anolis_carolinensis
ENSGAFG00000012806	pdcd11	99	45.249	ENSANAG00000034576	PDCD11	99	45.400	Aotus_nancymaae
ENSGAFG00000012806	pdcd11	88	87.838	ENSACLG00000018236	pdcd11	99	83.333	Astatotilapia_calliptera
ENSGAFG00000012806	pdcd11	94	56.356	ENSAMXG00000005458	pdcd11	97	56.933	Astyanax_mexicanus
ENSGAFG00000012806	pdcd11	100	44.023	ENSBTAG00000009715	PDCD11	99	43.841	Bos_taurus
ENSGAFG00000012806	pdcd11	99	43.451	ENSCJAG00000018257	PDCD11	97	45.701	Callithrix_jacchus
ENSGAFG00000012806	pdcd11	99	46.003	ENSCAFG00000010411	PDCD11	99	43.845	Canis_familiaris
ENSGAFG00000012806	pdcd11	99	49.315	ENSCAFG00020010369	PDCD11	99	44.080	Canis_lupus_dingo
ENSGAFG00000012806	pdcd11	99	45.889	ENSCHIG00000025218	PDCD11	99	43.776	Capra_hircus
ENSGAFG00000012806	pdcd11	97	44.245	ENSTSYG00000033423	PDCD11	97	43.321	Carlito_syrichta
ENSGAFG00000012806	pdcd11	97	48.087	ENSCAPG00000005386	PDCD11	98	53.333	Cavia_aperea
ENSGAFG00000012806	pdcd11	93	49.710	ENSCPOG00000010957	PDCD11	99	43.093	Cavia_porcellus
ENSGAFG00000012806	pdcd11	99	45.372	ENSCCAG00000018950	PDCD11	99	43.082	Cebus_capucinus
ENSGAFG00000012806	pdcd11	99	43.225	ENSCATG00000044331	PDCD11	99	43.014	Cercocebus_atys
ENSGAFG00000012806	pdcd11	99	49.550	ENSCLAG00000001029	PDCD11	93	49.550	Chinchilla_lanigera
ENSGAFG00000012806	pdcd11	99	43.330	ENSCSAG00000005346	PDCD11	99	43.119	Chlorocebus_sabaeus
ENSGAFG00000012806	pdcd11	76	73.643	ENSCHOG00000004796	PDCD11	75	73.643	Choloepus_hoffmanni
ENSGAFG00000012806	pdcd11	89	62.202	ENSCPBG00000024487	PDCD11	99	63.772	Chrysemys_picta_bellii
ENSGAFG00000012806	pdcd11	86	44.151	ENSCING00000002715	-	86	44.151	Ciona_intestinalis
ENSGAFG00000012806	pdcd11	99	43.481	ENSCANG00000043300	PDCD11	99	43.531	Colobus_angolensis_palliatus
ENSGAFG00000012806	pdcd11	99	49.821	ENSCGRG00001006458	Pdcd11	99	48.940	Cricetulus_griseus_chok1gshd
ENSGAFG00000012806	pdcd11	99	49.553	ENSCGRG00000003583	Pdcd11	99	48.763	Cricetulus_griseus_crigri
ENSGAFG00000012806	pdcd11	97	61.765	ENSCSEG00000010739	pdcd11	97	65.458	Cynoglossus_semilaevis
ENSGAFG00000012806	pdcd11	97	78.030	ENSCVAG00000018903	pdcd11	93	79.651	Cyprinodon_variegatus
ENSGAFG00000012806	pdcd11	100	49.708	ENSDARG00000052480	pdcd11	100	50.292	Danio_rerio
ENSGAFG00000012806	pdcd11	99	48.469	ENSDNOG00000013838	PDCD11	99	43.194	Dasypus_novemcinctus
ENSGAFG00000012806	pdcd11	99	48.276	ENSDORG00000010420	Pdcd11	95	49.627	Dipodomys_ordii
ENSGAFG00000012806	pdcd11	55	31.989	FBgn0039182	CG5728	65	33.531	Drosophila_melanogaster
ENSGAFG00000012806	pdcd11	89	57.778	ENSETEG00000000813	PDCD11	94	57.778	Echinops_telfairi
ENSGAFG00000012806	pdcd11	58	51.246	ENSEBUG00000002358	-	81	51.246	Eptatretus_burgeri
ENSGAFG00000012806	pdcd11	97	50.699	ENSEASG00005015159	PDCD11	94	51.027	Equus_asinus_asinus
ENSGAFG00000012806	pdcd11	99	44.270	ENSECAG00000020507	PDCD11	99	44.218	Equus_caballus
ENSGAFG00000012806	pdcd11	87	57.778	ENSEEUG00000009245	PDCD11	88	57.778	Erinaceus_europaeus
ENSGAFG00000012806	pdcd11	100	63.128	ENSELUG00000004211	pdcd11	96	64.060	Esox_lucius
ENSGAFG00000012806	pdcd11	99	49.474	ENSFCAG00000002384	PDCD11	93	50.264	Felis_catus
ENSGAFG00000012806	pdcd11	99	51.750	ENSFALG00000008775	PDCD11	94	51.934	Ficedula_albicollis
ENSGAFG00000012806	pdcd11	99	42.520	ENSFDAG00000009532	PDCD11	99	42.707	Fukomys_damarensis
ENSGAFG00000012806	pdcd11	88	90.301	ENSFHEG00000022997	pdcd11	96	90.301	Fundulus_heteroclitus
ENSGAFG00000012806	pdcd11	89	69.921	ENSGMOG00000004186	pdcd11	90	73.977	Gadus_morhua
ENSGAFG00000012806	pdcd11	75	41.974	ENSGALG00000008265	PDCD11	99	41.667	Gallus_gallus
ENSGAFG00000012806	pdcd11	100	67.616	ENSGACG00000018233	pdcd11	95	79.947	Gasterosteus_aculeatus
ENSGAFG00000012806	pdcd11	97	50.184	ENSGAGG00000024314	PDCD11	99	46.648	Gopherus_agassizii
ENSGAFG00000012806	pdcd11	99	43.323	ENSGGOG00000011621	PDCD11	99	42.842	Gorilla_gorilla
ENSGAFG00000012806	pdcd11	99	73.271	ENSHBUG00000020226	pdcd11	96	74.484	Haplochromis_burtoni
ENSGAFG00000012806	pdcd11	99	42.887	ENSHGLG00000001462	PDCD11	99	42.550	Heterocephalus_glaber_female
ENSGAFG00000012806	pdcd11	99	42.197	ENSHGLG00100018779	PDCD11	99	42.136	Heterocephalus_glaber_male
ENSGAFG00000012806	pdcd11	100	63.363	ENSHCOG00000016006	pdcd11	99	63.363	Hippocampus_comes
ENSGAFG00000012806	pdcd11	61	50.438	ENSIPUG00000015102	pdcd11	99	51.884	Ictalurus_punctatus
ENSGAFG00000012806	pdcd11	99	48.929	ENSSTOG00000014553	PDCD11	93	50.000	Ictidomys_tridecemlineatus
ENSGAFG00000012806	pdcd11	99	43.803	ENSJJAG00000015523	Pdcd11	99	44.094	Jaculus_jaculus
ENSGAFG00000012806	pdcd11	52	61.794	ENSKMAG00000021182	pdcd11	99	66.193	Kryptolebias_marmoratus
ENSGAFG00000012806	pdcd11	99	55.410	ENSLOCG00000011818	pdcd11	99	50.911	Lepisosteus_oculatus
ENSGAFG00000012806	pdcd11	99	43.262	ENSLAFG00000008398	PDCD11	99	43.216	Loxodonta_africana
ENSGAFG00000012806	pdcd11	99	43.007	ENSMFAG00000044058	PDCD11	99	43.112	Macaca_fascicularis
ENSGAFG00000012806	pdcd11	99	43.007	ENSMMUG00000007058	PDCD11	99	43.112	Macaca_mulatta
ENSGAFG00000012806	pdcd11	99	42.932	ENSMNEG00000040726	PDCD11	99	43.059	Macaca_nemestrina
ENSGAFG00000012806	pdcd11	99	42.887	ENSMLEG00000040978	PDCD11	99	43.098	Mandrillus_leucophaeus
ENSGAFG00000012806	pdcd11	100	74.674	ENSMAMG00000009572	pdcd11	96	75.047	Mastacembelus_armatus
ENSGAFG00000012806	pdcd11	99	73.458	ENSMZEG00005008949	pdcd11	96	74.672	Maylandia_zebra
ENSGAFG00000012806	pdcd11	99	44.817	ENSMGAG00000010482	PDCD11	99	45.897	Meleagris_gallopavo
ENSGAFG00000012806	pdcd11	91	44.612	ENSMAUG00000014924	Pdcd11	97	44.975	Mesocricetus_auratus
ENSGAFG00000012806	pdcd11	99	43.485	ENSMICG00000012421	PDCD11	99	43.291	Microcebus_murinus
ENSGAFG00000012806	pdcd11	99	52.206	ENSMOCG00000021792	Pdcd11	93	53.199	Microtus_ochrogaster
ENSGAFG00000012806	pdcd11	97	63.884	ENSMMOG00000007572	pdcd11	97	66.815	Mola_mola
ENSGAFG00000012806	pdcd11	99	47.405	ENSMODG00000011077	PDCD11	94	48.054	Monodelphis_domestica
ENSGAFG00000012806	pdcd11	100	58.193	ENSMALG00000003859	pdcd11	99	79.056	Monopterus_albus
ENSGAFG00000012806	pdcd11	99	49.543	MGP_CAROLIEiJ_G0023050	Pdcd11	93	49.171	Mus_caroli
ENSGAFG00000012806	pdcd11	99	48.901	ENSMUSG00000025047	Pdcd11	93	49.267	Mus_musculus
ENSGAFG00000012806	pdcd11	99	49.189	MGP_PahariEiJ_G0014540	Pdcd11	93	49.278	Mus_pahari
ENSGAFG00000012806	pdcd11	99	49.088	MGP_SPRETEiJ_G0023971	Pdcd11	93	49.453	Mus_spretus
ENSGAFG00000012806	pdcd11	99	48.885	ENSMPUG00000016829	PDCD11	99	44.147	Mustela_putorius_furo
ENSGAFG00000012806	pdcd11	99	45.185	ENSMLUG00000004997	PDCD11	97	46.418	Myotis_lucifugus
ENSGAFG00000012806	pdcd11	99	49.912	ENSNGAG00000018143	Pdcd11	99	43.405	Nannospalax_galili
ENSGAFG00000012806	pdcd11	81	81.818	ENSNBRG00000021596	pdcd11	95	75.953	Neolamprologus_brichardi
ENSGAFG00000012806	pdcd11	99	45.414	ENSNLEG00000026700	PDCD11	99	45.263	Nomascus_leucogenys
ENSGAFG00000012806	pdcd11	69	67.111	ENSMEUG00000013719	-	68	67.111	Notamacropus_eugenii
ENSGAFG00000012806	pdcd11	99	50.089	ENSOPRG00000010593	PDCD11	96	43.909	Ochotona_princeps
ENSGAFG00000012806	pdcd11	99	43.061	ENSODEG00000008079	PDCD11	99	43.143	Octodon_degus
ENSGAFG00000012806	pdcd11	99	66.810	ENSONIG00000018835	pdcd11	99	66.721	Oreochromis_niloticus
ENSGAFG00000012806	pdcd11	99	49.915	ENSOANG00000001636	-	95	49.406	Ornithorhynchus_anatinus
ENSGAFG00000012806	pdcd11	99	49.825	ENSOCUG00000006312	PDCD11	93	50.000	Oryctolagus_cuniculus
ENSGAFG00000012806	pdcd11	52	59.818	ENSORLG00000012995	pdcd11	96	66.398	Oryzias_latipes
ENSGAFG00000012806	pdcd11	100	70.315	ENSORLG00020003642	pdcd11	96	70.315	Oryzias_latipes_hni
ENSGAFG00000012806	pdcd11	100	70.446	ENSORLG00015001618	pdcd11	96	70.632	Oryzias_latipes_hsok
ENSGAFG00000012806	pdcd11	66	69.907	ENSOMEG00000010904	pdcd11	92	70.280	Oryzias_melastigma
ENSGAFG00000012806	pdcd11	99	45.400	ENSOGAG00000008683	PDCD11	99	43.920	Otolemur_garnettii
ENSGAFG00000012806	pdcd11	99	45.373	ENSOARG00000003719	PDCD11	99	43.567	Ovis_aries
ENSGAFG00000012806	pdcd11	99	49.385	ENSPPAG00000024593	PDCD11	99	42.413	Pan_paniscus
ENSGAFG00000012806	pdcd11	99	44.006	ENSPPRG00000015133	PDCD11	99	43.819	Panthera_pardus
ENSGAFG00000012806	pdcd11	99	43.901	ENSPTIG00000011433	PDCD11	99	43.714	Panthera_tigris_altaica
ENSGAFG00000012806	pdcd11	99	43.277	ENSPTRG00000002911	PDCD11	99	43.211	Pan_troglodytes
ENSGAFG00000012806	pdcd11	99	43.323	ENSPANG00000020959	PDCD11	99	43.112	Papio_anubis
ENSGAFG00000012806	pdcd11	99	58.365	ENSPKIG00000000973	pdcd11	93	58.989	Paramormyrops_kingsleyae
ENSGAFG00000012806	pdcd11	77	42.867	ENSPSIG00000005102	PDCD11	95	42.867	Pelodiscus_sinensis
ENSGAFG00000012806	pdcd11	85	72.038	ENSPMGG00000007289	pdcd11	100	71.327	Periophthalmus_magnuspinnatus
ENSGAFG00000012806	pdcd11	99	47.788	ENSPEMG00000010315	Pdcd11	99	42.753	Peromyscus_maniculatus_bairdii
ENSGAFG00000012806	pdcd11	99	44.068	ENSPMAG00000003098	pdcd11	95	44.178	Petromyzon_marinus
ENSGAFG00000012806	pdcd11	99	42.670	ENSPCIG00000001118	PDCD11	99	43.066	Phascolarctos_cinereus
ENSGAFG00000012806	pdcd11	100	88.806	ENSPFOG00000006012	pdcd11	96	89.179	Poecilia_formosa
ENSGAFG00000012806	pdcd11	97	87.570	ENSPLAG00000014494	pdcd11	98	82.425	Poecilia_latipinna
ENSGAFG00000012806	pdcd11	94	89.030	ENSPMEG00000018177	pdcd11	98	87.975	Poecilia_mexicana
ENSGAFG00000012806	pdcd11	100	89.366	ENSPREG00000000475	pdcd11	96	89.739	Poecilia_reticulata
ENSGAFG00000012806	pdcd11	99	39.496	ENSPPYG00000002621	PDCD11	99	39.579	Pongo_abelii
ENSGAFG00000012806	pdcd11	64	50.772	ENSPCAG00000011663	PDCD11	64	51.904	Procavia_capensis
ENSGAFG00000012806	pdcd11	93	46.692	ENSPCOG00000023327	PDCD11	99	39.357	Propithecus_coquereli
ENSGAFG00000012806	pdcd11	99	48.966	ENSPVAG00000004176	PDCD11	94	48.966	Pteropus_vampyrus
ENSGAFG00000012806	pdcd11	99	73.034	ENSPNYG00000003979	pdcd11	96	74.248	Pundamilia_nyererei
ENSGAFG00000012806	pdcd11	97	61.080	ENSPNAG00000017225	pdcd11	96	61.639	Pygocentrus_nattereri
ENSGAFG00000012806	pdcd11	99	48.421	ENSRNOG00000020304	Pdcd11	99	42.611	Rattus_norvegicus
ENSGAFG00000012806	pdcd11	99	43.218	ENSRBIG00000011889	PDCD11	99	43.269	Rhinopithecus_bieti
ENSGAFG00000012806	pdcd11	99	43.218	ENSRROG00000030483	PDCD11	99	43.269	Rhinopithecus_roxellana
ENSGAFG00000012806	pdcd11	78	45.038	YMR229C	-	93	34.225	Saccharomyces_cerevisiae
ENSGAFG00000012806	pdcd11	99	40.792	ENSSBOG00000030308	PDCD11	99	40.582	Saimiri_boliviensis_boliviensis
ENSGAFG00000012806	pdcd11	99	42.300	ENSSHAG00000018258	PDCD11	99	42.594	Sarcophilus_harrisii
ENSGAFG00000012806	pdcd11	100	59.964	ENSSFOG00015003881	pdcd11	95	59.783	Scleropages_formosus
ENSGAFG00000012806	pdcd11	100	74.674	ENSSMAG00000006612	pdcd11	96	75.047	Scophthalmus_maximus
ENSGAFG00000012806	pdcd11	98	63.470	ENSSDUG00000021302	pdcd11	99	65.525	Seriola_dumerili
ENSGAFG00000012806	pdcd11	50	60.044	ENSSLDG00000010228	pdcd11	98	65.556	Seriola_lalandi_dorsalis
ENSGAFG00000012806	pdcd11	74	65.306	ENSSARG00000002540	PDCD11	63	65.306	Sorex_araneus
ENSGAFG00000012806	pdcd11	96	73.805	ENSSPAG00000017558	pdcd11	96	74.220	Stegastes_partitus
ENSGAFG00000012806	pdcd11	99	45.345	ENSSSCG00000010599	PDCD11	99	44.698	Sus_scrofa
ENSGAFG00000012806	pdcd11	69	61.641	ENSTRUG00000014291	pdcd11	100	61.875	Takifugu_rubripes
ENSGAFG00000012806	pdcd11	99	68.659	ENSTNIG00000012085	pdcd11	99	68.841	Tetraodon_nigroviridis
ENSGAFG00000012806	pdcd11	94	62.209	ENSTBEG00000001893	PDCD11	93	62.611	Tupaia_belangeri
ENSGAFG00000012806	pdcd11	91	65.203	ENSTTRG00000003356	PDCD11	91	44.611	Tursiops_truncatus
ENSGAFG00000012806	pdcd11	99	49.233	ENSUAMG00000018015	PDCD11	99	44.048	Ursus_americanus
ENSGAFG00000012806	pdcd11	99	48.547	ENSUMAG00000023567	PDCD11	99	43.440	Ursus_maritimus
ENSGAFG00000012806	pdcd11	64	53.012	ENSVPAG00000007405	PDCD11	77	53.012	Vicugna_pacos
ENSGAFG00000012806	pdcd11	99	45.783	ENSVVUG00000004457	PDCD11	97	46.375	Vulpes_vulpes
ENSGAFG00000012806	pdcd11	99	46.222	ENSXETG00000009482	pdcd11	99	42.798	Xenopus_tropicalis
ENSGAFG00000012806	pdcd11	100	75.504	ENSXCOG00000012420	pdcd11	99	74.304	Xiphophorus_couchianus
ENSGAFG00000012806	pdcd11	100	90.858	ENSXMAG00000004638	pdcd11	96	91.231	Xiphophorus_maculatus