EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 3094 bases
Position: chrNHOQ01001971.1:12401182-12404275
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000018975	MMR_HSR1	PF01926.23	6e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019154	-	1426	-	ENSGAFP00000018975	196 (aa)	-	UPI000DD2647C

Gene Model

Click here to download ENSGAFG00000012819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012819	-	86	48.521	ENSGAFG00000018151	-	92	48.521
ENSGAFG00000012819	-	82	33.918	ENSGAFG00000004846	-	85	33.918
ENSGAFG00000012819	-	86	50.000	ENSGAFG00000021449	-	92	50.000
ENSGAFG00000012819	-	83	44.578	ENSGAFG00000012473	arl4d	83	44.578
ENSGAFG00000012819	-	86	49.405	ENSGAFG00000021727	arf3b	91	49.405
ENSGAFG00000012819	-	81	38.365	ENSGAFG00000003465	arl5a	71	38.365
ENSGAFG00000012819	-	65	37.795	ENSGAFG00000009702	sar1ab	63	37.795
ENSGAFG00000012819	-	79	36.129	ENSGAFG00000010573	-	81	37.419
ENSGAFG00000012819	-	87	40.909	ENSGAFG00000014283	arl4aa	88	40.909
ENSGAFG00000012819	-	81	39.506	ENSGAFG00000012355	ARL6	86	39.506
ENSGAFG00000012819	-	82	38.125	ENSGAFG00000002547	arl5c	88	37.888
ENSGAFG00000012819	-	88	40.116	ENSGAFG00000008601	arl3l2	77	40.116
ENSGAFG00000012819	-	73	34.545	ENSGAFG00000011077	-	92	34.545
ENSGAFG00000012819	-	85	42.515	ENSGAFG00000005872	arl3	92	42.515
ENSGAFG00000012819	-	82	33.918	ENSGAFG00000007081	sar1b	85	33.918
ENSGAFG00000012819	-	83	36.994	ENSGAFG00000006962	arfrp1	85	36.994
ENSGAFG00000012819	-	61	34.167	ENSGAFG00000017776	arl8a	69	34.167
ENSGAFG00000012819	-	86	49.405	ENSGAFG00000009954	-	73	49.405
ENSGAFG00000012819	-	81	49.686	ENSGAFG00000018703	arf5	87	49.686
ENSGAFG00000012819	-	84	42.262	ENSGAFG00000020556	arl4cb	87	42.262
ENSGAFG00000012819	-	50	56.122	ENSGAFG00000002801	-	85	56.122
ENSGAFG00000012819	-	70	33.566	ENSGAFG00000010938	arl8ba	77	33.566
ENSGAFG00000012819	-	81	41.772	ENSGAFG00000015025	arl2	84	41.772
ENSGAFG00000012819	-	81	47.170	ENSGAFG00000000058	arl11	99	47.170
ENSGAFG00000012819	-	80	41.401	ENSGAFG00000006973	arl1	92	41.401
ENSGAFG00000012819	-	70	33.566	ENSGAFG00000008497	arl8bb	76	33.566
ENSGAFG00000012819	-	81	49.686	ENSGAFG00000005163	-	87	49.686
ENSGAFG00000012819	-	78	34.194	ENSGAFG00000000025	arl13b	57	33.548
ENSGAFG00000012819	-	86	49.405	ENSGAFG00000010799	arf2b	91	49.405

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012819	-	90	56.284	ENSACIG00000013244	arl14	89	56.284	Amphilophus_citrinellus
ENSGAFG00000012819	-	90	55.000	ENSACLG00000026984	arl14	89	55.000	Astatotilapia_calliptera
ENSGAFG00000012819	-	99	81.026	ENSACLG00000015415	-	94	81.026	Astatotilapia_calliptera
ENSGAFG00000012819	-	99	74.359	ENSCSEG00000017926	-	95	74.359	Cynoglossus_semilaevis
ENSGAFG00000012819	-	100	53.769	ENSDARG00000063223	arl14	99	53.769	Danio_rerio
ENSGAFG00000012819	-	94	68.108	ENSELUG00000024060	-	65	68.108	Esox_lucius
ENSGAFG00000012819	-	90	55.307	ENSFHEG00000018721	arl14	89	55.307	Fundulus_heteroclitus
ENSGAFG00000012819	-	82	53.704	ENSGMOG00000020214	arl14	97	53.704	Gadus_morhua
ENSGAFG00000012819	-	86	57.988	ENSGACG00000013840	arl14	93	57.988	Gasterosteus_aculeatus
ENSGAFG00000012819	-	93	79.781	ENSGACG00000010096	-	100	79.781	Gasterosteus_aculeatus
ENSGAFG00000012819	-	90	55.000	ENSHBUG00000001159	arl14	89	55.000	Haplochromis_burtoni
ENSGAFG00000012819	-	98	49.500	ENSHCOG00000009562	arl14	94	49.500	Hippocampus_comes
ENSGAFG00000012819	-	96	54.167	ENSKMAG00000010409	arl14	96	54.167	Kryptolebias_marmoratus
ENSGAFG00000012819	-	99	78.974	ENSKMAG00000020389	-	94	78.974	Kryptolebias_marmoratus
ENSGAFG00000012819	-	89	55.932	ENSLBEG00000021116	arl14	83	55.932	Labrus_bergylta
ENSGAFG00000012819	-	90	56.983	ENSMAMG00000011773	arl14	89	56.983	Mastacembelus_armatus
ENSGAFG00000012819	-	99	81.026	ENSMAMG00000012474	-	94	81.026	Mastacembelus_armatus
ENSGAFG00000012819	-	90	55.000	ENSMZEG00005025506	arl14	89	55.000	Maylandia_zebra
ENSGAFG00000012819	-	99	81.026	ENSMZEG00005000218	-	94	81.026	Maylandia_zebra
ENSGAFG00000012819	-	86	56.471	ENSONIG00000009954	arl14	82	56.471	Oreochromis_niloticus
ENSGAFG00000012819	-	99	81.026	ENSONIG00000003641	-	83	81.026	Oreochromis_niloticus
ENSGAFG00000012819	-	93	51.087	ENSORLG00000027330	arl14	99	51.087	Oryzias_latipes
ENSGAFG00000012819	-	93	51.087	ENSORLG00020014120	arl14	99	51.087	Oryzias_latipes_hni
ENSGAFG00000012819	-	93	51.087	ENSORLG00015014176	arl14	99	51.087	Oryzias_latipes_hsok
ENSGAFG00000012819	-	82	54.938	ENSOMEG00000016904	arl14	89	54.938	Oryzias_melastigma
ENSGAFG00000012819	-	87	55.814	ENSPFOG00000020069	arl14	87	55.814	Poecilia_formosa
ENSGAFG00000012819	-	99	93.333	ENSPFOG00000012216	-	92	93.333	Poecilia_formosa
ENSGAFG00000012819	-	82	57.407	ENSPLAG00000017362	arl14	93	57.407	Poecilia_latipinna
ENSGAFG00000012819	-	99	91.795	ENSPMEG00000008427	-	94	91.795	Poecilia_mexicana
ENSGAFG00000012819	-	87	56.977	ENSPREG00000001976	arl14	86	56.977	Poecilia_reticulata
ENSGAFG00000012819	-	99	94.872	ENSPREG00000001895	-	94	94.872	Poecilia_reticulata
ENSGAFG00000012819	-	94	81.081	ENSPNYG00000006844	-	96	81.081	Pundamilia_nyererei
ENSGAFG00000012819	-	99	82.564	ENSSMAG00000012843	-	94	82.564	Scophthalmus_maximus
ENSGAFG00000012819	-	57	75.893	ENSSDUG00000023723	-	100	75.893	Seriola_dumerili
ENSGAFG00000012819	-	99	81.026	ENSSLDG00000006512	-	94	81.026	Seriola_lalandi_dorsalis
ENSGAFG00000012819	-	87	56.977	ENSSPAG00000014539	arl14	85	56.977	Stegastes_partitus
ENSGAFG00000012819	-	99	84.103	ENSSPAG00000014422	-	94	84.103	Stegastes_partitus
ENSGAFG00000012819	-	90	57.542	ENSTNIG00000015242	-	92	57.542	Tetraodon_nigroviridis
ENSGAFG00000012819	-	99	94.359	ENSXMAG00000021386	-	94	94.359	Xiphophorus_maculatus