EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000012916 (Gene tree)
Gene ID
-
Gene Symbol
rpa1
Alias
wu:fi14b08|zgc:55337|zgc:77092
Full Name
replication protein A1
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
26849 bases
Position
chrNHOQ01001816.1:3425868-3452716
Accession
ZDB-GENE-030912-3
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000019147tRNA_anti-codonPF01336.258.3e-1311
ENSGAFP00000019135tRNA_anti-codonPF01336.258.7e-1311
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000019327-1758-ENSGAFP00000019147585 (aa)--
ENSGAFT00000019315-2848-ENSGAFP00000019135600 (aa)--
Gene Model
Click here to download ENSGAFG00000012916's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012916's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000012916rpa19269.495ENSGAFG00000020953RPA19958.282
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000012916rpa19962.425ENSAPOG00000019409RPA19062.425Acanthochromis_polyacanthus
ENSGAFG00000012916rpa19983.833ENSAPOG00000011658rpa19983.833Acanthochromis_polyacanthus
ENSGAFG00000012916rpa19961.803ENSAMEG00000007706RPA19961.803Ailuropoda_melanoleuca
ENSGAFG00000012916rpa19676.471ENSACIG00000007277rpa19976.471Amphilophus_citrinellus
ENSGAFG00000012916rpa19661.840ENSACIG00000012881RPA19961.840Amphilophus_citrinellus
ENSGAFG00000012916rpa19982.471ENSAOCG00000023376rpa19982.471Amphiprion_ocellaris
ENSGAFG00000012916rpa19169.932ENSAOCG00000009003RPA19958.951Amphiprion_ocellaris
ENSGAFG00000012916rpa19170.387ENSAPEG00000019132RPA19957.315Amphiprion_percula
ENSGAFG00000012916rpa19982.638ENSAPEG00000008634rpa19982.638Amphiprion_percula
ENSGAFG00000012916rpa19683.216ENSATEG00000022024rpa110083.216Anabas_testudineus
ENSGAFG00000012916rpa19959.351ENSATEG00000006443RPA19959.351Anabas_testudineus
ENSGAFG00000012916rpa19754.613ENSAPLG00000012442RPA19954.911Anas_platyrhynchos
ENSGAFG00000012916rpa19957.285ENSACAG00000014490RPA19857.450Anolis_carolinensis
ENSGAFG00000012916rpa19664.134ENSANAG00000023456RPA19863.776Aotus_nancymaae
ENSGAFG00000012916rpa19584.144ENSACLG00000006640rpa19984.144Astatotilapia_calliptera
ENSGAFG00000012916rpa19961.575ENSACLG00000005223RPA19961.575Astatotilapia_calliptera
ENSGAFG00000012916rpa19976.373ENSAMXG00000008418rpa19976.705Astyanax_mexicanus
ENSGAFG00000012916rpa19961.928ENSBTAG00000009711RPA19961.928Bos_taurus
ENSGAFG00000012916rpa17333.180WBGene00017546rpa-16533.180Caenorhabditis_elegans
ENSGAFG00000012916rpa19961.576ENSCJAG00000001848RPA19962.273Callithrix_jacchus
ENSGAFG00000012916rpa19962.273ENSCAFG00000019249RPA19962.603Canis_familiaris
ENSGAFG00000012916rpa19962.273ENSCAFG00020009847RPA19962.603Canis_lupus_dingo
ENSGAFG00000012916rpa19961.664ENSCHIG00000026308RPA19961.866Capra_hircus
ENSGAFG00000012916rpa19961.741ENSTSYG00000003482-9961.741Carlito_syrichta
ENSGAFG00000012916rpa19962.768ENSCPOG00000000035RPA19962.768Cavia_porcellus
ENSGAFG00000012916rpa19952.053ENSCCAG00000010981RPA19852.718Cebus_capucinus
ENSGAFG00000012916rpa19958.251ENSCLAG00000015045-9858.251Chinchilla_lanigera
ENSGAFG00000012916rpa19961.944ENSCLAG00000005185-9961.944Chinchilla_lanigera
ENSGAFG00000012916rpa19953.048ENSCSAG00000013833RPA19853.366Chlorocebus_sabaeus
ENSGAFG00000012916rpa17469.977ENSCHOG00000009454-9969.977Choloepus_hoffmanni
ENSGAFG00000012916rpa19561.921ENSCHOG00000013540-9961.921Choloepus_hoffmanni
ENSGAFG00000012916rpa19963.262ENSCPBG00000020377RPA19964.021Chrysemys_picta_bellii
ENSGAFG00000012916rpa19942.739ENSCING00000023482-9842.739Ciona_intestinalis
ENSGAFG00000012916rpa19664.311ENSCANG00000030911RPA19962.373Colobus_angolensis_palliatus
ENSGAFG00000012916rpa19962.153ENSCGRG00001008197Rpa19962.153Cricetulus_griseus_chok1gshd
ENSGAFG00000012916rpa17570.843ENSCGRG00000000582Rpa19964.032Cricetulus_griseus_crigri
ENSGAFG00000012916rpa19955.929ENSCSEG00000012726RPA19957.045Cynoglossus_semilaevis
ENSGAFG00000012916rpa110078.583ENSCSEG00000013066rpa110078.583Cynoglossus_semilaevis
ENSGAFG00000012916rpa110089.951ENSCVAG00000019431rpa110090.115Cyprinodon_variegatus
ENSGAFG00000012916rpa19569.492ENSCVAG00000013446-8669.492Cyprinodon_variegatus
ENSGAFG00000012916rpa19974.624ENSDARG00000003938rpa19974.624Danio_rerio
ENSGAFG00000012916rpa19862.852ENSDNOG00000017218RPA19862.852Dasypus_novemcinctus
ENSGAFG00000012916rpa19962.932ENSDORG00000006199Rpa19963.097Dipodomys_ordii
ENSGAFG00000012916rpa19941.749FBgn0010173RpA-709942.574Drosophila_melanogaster
ENSGAFG00000012916rpa18274.468ENSETEG00000017608RPA18174.468Echinops_telfairi
ENSGAFG00000012916rpa19664.134ENSEASG00005009372RPA19864.685Equus_asinus_asinus
ENSGAFG00000012916rpa19962.603ENSECAG00000023886RPA19962.768Equus_caballus
ENSGAFG00000012916rpa17169.928ENSEEUG00000002186-6869.928Erinaceus_europaeus
ENSGAFG00000012916rpa19977.815ENSELUG00000021071rpa19977.815Esox_lucius
ENSGAFG00000012916rpa18961.887ENSELUG00000006136RPA19961.887Esox_lucius
ENSGAFG00000012916rpa19962.500ENSFCAG00000006306RPA19862.500Felis_catus
ENSGAFG00000012916rpa19962.829ENSFALG00000006575RPA19862.829Ficedula_albicollis
ENSGAFG00000012916rpa19962.623ENSFDAG00000007720RPA19962.623Fukomys_damarensis
ENSGAFG00000012916rpa110089.091ENSFHEG00000003580rpa110089.091Fundulus_heteroclitus
ENSGAFG00000012916rpa19975.336ENSGMOG00000010382rpa19975.336Gadus_morhua
ENSGAFG00000012916rpa19961.741ENSGALG00000003072RPA19861.741Gallus_gallus
ENSGAFG00000012916rpa110080.100ENSGACG00000010856rpa110080.100Gasterosteus_aculeatus
ENSGAFG00000012916rpa19962.768ENSGAGG00000013611RPA19862.768Gopherus_agassizii
ENSGAFG00000012916rpa19864.522ENSGGOG00000014186RPA19863.149Gorilla_gorilla
ENSGAFG00000012916rpa19658.290ENSHBUG00000009348RPA19858.304Haplochromis_burtoni
ENSGAFG00000012916rpa19985.833ENSHBUG00000017773rpa19985.833Haplochromis_burtoni
ENSGAFG00000012916rpa19961.928ENSHGLG00000008846RPA19962.109Heterocephalus_glaber_female
ENSGAFG00000012916rpa19952.280ENSHGLG00100002005-9852.614Heterocephalus_glaber_male
ENSGAFG00000012916rpa19961.928ENSHGLG00100017755-9962.109Heterocephalus_glaber_male
ENSGAFG00000012916rpa19958.553ENSHGLG00100000799-9858.553Heterocephalus_glaber_male
ENSGAFG00000012916rpa110073.246ENSHCOG00000001401rpa110073.083Hippocampus_comes
ENSGAFG00000012916rpa19944.500ENSHCOG00000000351RPA19744.500Hippocampus_comes
ENSGAFG00000012916rpa19975.124ENSIPUG00000004400rpa19975.124Ictalurus_punctatus
ENSGAFG00000012916rpa19162.172ENSSTOG00000022475RPA19562.172Ictidomys_tridecemlineatus
ENSGAFG00000012916rpa19663.390ENSJJAG00000000876Rpa19863.390Jaculus_jaculus
ENSGAFG00000012916rpa110080.229ENSKMAG00000005605rpa110080.750Kryptolebias_marmoratus
ENSGAFG00000012916rpa19959.901ENSKMAG00000000234RPA19959.901Kryptolebias_marmoratus
ENSGAFG00000012916rpa19668.578ENSLBEG00000002281RPA18268.578Labrus_bergylta
ENSGAFG00000012916rpa19980.298ENSLBEG00000021604rpa19980.298Labrus_bergylta
ENSGAFG00000012916rpa18160.600ENSLACG00000007210RPA19960.600Latimeria_chalumnae
ENSGAFG00000012916rpa19971.285ENSLOCG00000006397rpa19971.285Lepisosteus_oculatus
ENSGAFG00000012916rpa19961.327ENSLAFG00000015354RPA19961.327Loxodonta_africana
ENSGAFG00000012916rpa18060.121ENSMFAG00000036138-9860.484Macaca_fascicularis
ENSGAFG00000012916rpa19957.214ENSMMUG00000002442-9857.214Macaca_mulatta
ENSGAFG00000012916rpa19663.095ENSMMUG00000011604-9763.390Macaca_mulatta
ENSGAFG00000012916rpa19954.515ENSMNEG00000029837-9854.515Macaca_nemestrina
ENSGAFG00000012916rpa19662.436ENSMNEG00000031632-9863.032Macaca_nemestrina
ENSGAFG00000012916rpa19659.696ENSMLEG00000038768-9759.865Mandrillus_leucophaeus
ENSGAFG00000012916rpa110084.027ENSMAMG00000017993rpa110084.027Mastacembelus_armatus
ENSGAFG00000012916rpa19869.302ENSMAMG00000020097RPA19962.651Mastacembelus_armatus
ENSGAFG00000012916rpa19985.500ENSMZEG00005007551rpa19985.500Maylandia_zebra
ENSGAFG00000012916rpa19961.575ENSMZEG00005024731RPA19961.575Maylandia_zebra
ENSGAFG00000012916rpa19861.730ENSMGAG00000005315RPA19861.730Meleagris_gallopavo
ENSGAFG00000012916rpa19663.220ENSMAUG00000010474Rpa19863.265Mesocricetus_auratus
ENSGAFG00000012916rpa19962.664ENSMICG00000012867RPA19963.322Microcebus_murinus
ENSGAFG00000012916rpa19962.109ENSMOCG00000013019Rpa19962.109Microtus_ochrogaster
ENSGAFG00000012916rpa19860.870ENSMMOG00000010868RPA19860.870Mola_mola
ENSGAFG00000012916rpa110079.201ENSMMOG00000014292rpa110081.583Mola_mola
ENSGAFG00000012916rpa19962.029ENSMODG00000010549RPA19962.029Monodelphis_domestica
ENSGAFG00000012916rpa110085.191ENSMALG00000011453rpa110085.191Monopterus_albus
ENSGAFG00000012916rpa19968.879ENSMALG00000001208RPA18668.879Monopterus_albus
ENSGAFG00000012916rpa19962.684MGP_CAROLIEiJ_G0016734Rpa19962.684Mus_caroli
ENSGAFG00000012916rpa19961.264ENSMUSG00000000751Rpa19961.264Mus_musculus
ENSGAFG00000012916rpa19962.704MGP_PahariEiJ_G0017871Rpa19962.704Mus_pahari
ENSGAFG00000012916rpa19961.165MGP_SPRETEiJ_G0017577Rpa19961.165Mus_spretus
ENSGAFG00000012916rpa19962.603ENSMPUG00000013119RPA19962.603Mustela_putorius_furo
ENSGAFG00000012916rpa19662.500ENSMLUG00000006113RPA19562.500Myotis_lucifugus
ENSGAFG00000012916rpa19961.084ENSNGAG00000004522Rpa19761.084Nannospalax_galili
ENSGAFG00000012916rpa19760.870ENSNBRG00000009672RPA19759.799Neolamprologus_brichardi
ENSGAFG00000012916rpa19683.779ENSNBRG00000020595rpa19983.779Neolamprologus_brichardi
ENSGAFG00000012916rpa19962.745ENSNLEG00000017149RPA19962.768Nomascus_leucogenys
ENSGAFG00000012916rpa19654.315ENSMEUG00000006714RPA19754.315Notamacropus_eugenii
ENSGAFG00000012916rpa19660.304ENSODEG00000009038RPA19661.279Octodon_degus
ENSGAFG00000012916rpa19984.150ENSONIG00000013135rpa19984.150Oreochromis_niloticus
ENSGAFG00000012916rpa19863.079ENSOANG00000010880RPA19963.245Ornithorhynchus_anatinus
ENSGAFG00000012916rpa19959.906ENSOCUG00000001504RPA19959.906Oryctolagus_cuniculus
ENSGAFG00000012916rpa19982.972ENSORLG00000004856rpa19982.972Oryzias_latipes
ENSGAFG00000012916rpa19957.143ENSORLG00000003368RPA19957.143Oryzias_latipes
ENSGAFG00000012916rpa19983.306ENSORLG00020008980rpa19983.306Oryzias_latipes_hni
ENSGAFG00000012916rpa19168.140ENSORLG00020015284RPA19955.505Oryzias_latipes_hni
ENSGAFG00000012916rpa16867.839ENSORLG00015005867-9764.471Oryzias_latipes_hsok
ENSGAFG00000012916rpa19983.306ENSORLG00015013982rpa19983.306Oryzias_latipes_hsok
ENSGAFG00000012916rpa19957.433ENSORLG00015020383RPA19957.433Oryzias_latipes_hsok
ENSGAFG00000012916rpa19981.636ENSOMEG00000004704rpa19981.636Oryzias_melastigma
ENSGAFG00000012916rpa19659.507ENSOMEG00000011040RPA19959.507Oryzias_melastigma
ENSGAFG00000012916rpa19962.109ENSOGAG00000005581-9962.109Otolemur_garnettii
ENSGAFG00000012916rpa17575.419ENSOGAG00000029379-9775.419Otolemur_garnettii
ENSGAFG00000012916rpa19962.052ENSOARG00000014479RPA19962.255Ovis_aries
ENSGAFG00000012916rpa19963.235ENSPPAG00000039680RPA19963.262Pan_paniscus
ENSGAFG00000012916rpa19962.336ENSPPRG00000011807RPA19862.336Panthera_pardus
ENSGAFG00000012916rpa19962.336ENSPTIG00000007898RPA19862.336Panthera_tigris_altaica
ENSGAFG00000012916rpa19963.399ENSPTRG00000008539RPA19963.427Pan_troglodytes
ENSGAFG00000012916rpa19962.438ENSPANG00000024592RPA19962.726Papio_anubis
ENSGAFG00000012916rpa19475.044ENSPKIG00000008053rpa19375.393Paramormyrops_kingsleyae
ENSGAFG00000012916rpa19862.963ENSPSIG00000015617RPA19764.177Pelodiscus_sinensis
ENSGAFG00000012916rpa19761.160ENSPMGG00000000543RPA19962.478Periophthalmus_magnuspinnatus
ENSGAFG00000012916rpa19680.708ENSPMGG00000011589rpa19880.708Periophthalmus_magnuspinnatus
ENSGAFG00000012916rpa19962.993ENSPEMG00000021061Rpa19962.993Peromyscus_maniculatus_bairdii
ENSGAFG00000012916rpa19961.990ENSPCIG00000019049RPA19962.029Phascolarctos_cinereus
ENSGAFG00000012916rpa110096.333ENSPFOG00000003987rpa110096.333Poecilia_formosa
ENSGAFG00000012916rpa110095.833ENSPLAG00000004984rpa110095.833Poecilia_latipinna
ENSGAFG00000012916rpa19459.024ENSPLAG00000008844-9659.024Poecilia_latipinna
ENSGAFG00000012916rpa18669.554ENSPMEG00000003627-9658.632Poecilia_mexicana
ENSGAFG00000012916rpa110096.500ENSPMEG00000020602rpa110096.500Poecilia_mexicana
ENSGAFG00000012916rpa19386.022ENSPREG00000010174rpa19585.868Poecilia_reticulata
ENSGAFG00000012916rpa19469.495ENSPREG00000010119RPA18169.877Poecilia_reticulata
ENSGAFG00000012916rpa19962.295ENSPCOG00000001799RPA19962.295Propithecus_coquereli
ENSGAFG00000012916rpa19961.944ENSPVAG00000002149RPA19961.944Pteropus_vampyrus
ENSGAFG00000012916rpa19961.417ENSPNYG00000024165RPA19961.417Pundamilia_nyererei
ENSGAFG00000012916rpa19985.833ENSPNYG00000016316rpa19985.833Pundamilia_nyererei
ENSGAFG00000012916rpa19966.891ENSPNAG00000008599rpa19668.586Pygocentrus_nattereri
ENSGAFG00000012916rpa19669.756ENSRNOG00000003123Rpa19963.262Rattus_norvegicus
ENSGAFG00000012916rpa19962.438ENSRBIG00000036587RPA19962.438Rhinopithecus_bieti
ENSGAFG00000012916rpa19957.496ENSRROG00000043278RPA19857.496Rhinopithecus_roxellana
ENSGAFG00000012916rpa19433.105YAR007CRFA19333.105Saccharomyces_cerevisiae
ENSGAFG00000012916rpa19063.978ENSSBOG00000030233RPA19664.748Saimiri_boliviensis_boliviensis
ENSGAFG00000012916rpa19762.542ENSSHAG00000007969RPA19563.805Sarcophilus_harrisii
ENSGAFG00000012916rpa19977.243ENSSFOG00015005362rpa19277.243Scleropages_formosus
ENSGAFG00000012916rpa19068.192ENSSMAG00000019746RPA19955.319Scophthalmus_maximus
ENSGAFG00000012916rpa19970.370ENSSDUG00000016358RPA19963.600Seriola_dumerili
ENSGAFG00000012916rpa110084.692ENSSDUG00000011949rpa110084.692Seriola_dumerili
ENSGAFG00000012916rpa110084.692ENSSLDG00000011806rpa110084.692Seriola_lalandi_dorsalis
ENSGAFG00000012916rpa19770.139ENSSLDG00000020784RPA19363.400Seriola_lalandi_dorsalis
ENSGAFG00000012916rpa18678.788ENSSARG00000007506RPA19850.761Sorex_araneus
ENSGAFG00000012916rpa19762.309ENSSPUG00000007223RPA19862.309Sphenodon_punctatus
ENSGAFG00000012916rpa19862.944ENSSPAG00000011165RPA19862.944Stegastes_partitus
ENSGAFG00000012916rpa110083.694ENSSPAG00000009903rpa110083.694Stegastes_partitus
ENSGAFG00000012916rpa19961.194ENSSSCG00000017822RPA19862.500Sus_scrofa
ENSGAFG00000012916rpa19962.583ENSTGUG00000005775RPA19862.583Taeniopygia_guttata
ENSGAFG00000012916rpa19968.458ENSTRUG00000000405RPA19068.276Takifugu_rubripes
ENSGAFG00000012916rpa19979.599ENSTRUG00000003616rpa19979.599Takifugu_rubripes
ENSGAFG00000012916rpa110081.373ENSTNIG00000016199rpa19981.803Tetraodon_nigroviridis
ENSGAFG00000012916rpa17569.773ENSTBEG00000002709RPA17469.773Tupaia_belangeri
ENSGAFG00000012916rpa19961.501ENSTTRG00000001169RPA19961.990Tursiops_truncatus
ENSGAFG00000012916rpa18673.077ENSUAMG00000015676RPA19573.077Ursus_americanus
ENSGAFG00000012916rpa19962.312ENSUMAG00000009328RPA19962.336Ursus_maritimus
ENSGAFG00000012916rpa19959.836ENSVPAG00000009443RPA19959.836Vicugna_pacos
ENSGAFG00000012916rpa19961.944ENSVVUG00000021715RPA19962.273Vulpes_vulpes
ENSGAFG00000012916rpa19964.648ENSXETG00000013538rpa19966.113Xenopus_tropicalis
ENSGAFG00000012916rpa19394.982ENSXCOG00000010068rpa19494.982Xiphophorus_couchianus
ENSGAFG00000012916rpa19661.905ENSXCOG00000009899-9961.905Xiphophorus_couchianus
ENSGAFG00000012916rpa19269.266ENSXMAG00000010333RPA17969.266Xiphophorus_maculatus
ENSGAFG00000012916rpa110096.167ENSXMAG00000004102rpa110096.595Xiphophorus_maculatus

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