EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000012977 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5034 bases
Position: chrNHOQ01000774.1:1602-6635
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	1	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	2	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	3	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	4	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	5	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	6	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	7	8
ENSGAFP00000019203	zf-C2H2	PF00096.26	1e-46	8	8
ENSGAFP00000019203	zf-met	PF12874.7	4.4e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019385	-	3649	-	ENSGAFP00000019203	498 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000012977's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000012977's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000012977	-	92	41.720	ENSGAFG00000021140	-	100	41.720
ENSGAFG00000012977	-	90	36.142	ENSGAFG00000016347	znf668	91	36.142
ENSGAFG00000012977	-	85	33.140	ENSGAFG00000000293	si:ch211-166g5.4	76	32.948
ENSGAFG00000012977	-	99	40.598	ENSGAFG00000013677	-	98	40.598
ENSGAFG00000012977	-	90	34.648	ENSGAFG00000012934	-	77	35.294
ENSGAFG00000012977	-	90	42.029	ENSGAFG00000018422	-	58	42.361
ENSGAFG00000012977	-	95	43.810	ENSGAFG00000021143	-	82	43.810
ENSGAFG00000012977	-	89	42.500	ENSGAFG00000013363	-	76	42.500
ENSGAFG00000012977	-	86	36.170	ENSGAFG00000021427	snai2	53	36.170
ENSGAFG00000012977	-	87	40.154	ENSGAFG00000001156	-	60	41.593
ENSGAFG00000012977	-	94	33.423	ENSGAFG00000021891	znf319b	88	33.423
ENSGAFG00000012977	-	86	38.010	ENSGAFG00000018302	-	79	37.530
ENSGAFG00000012977	-	87	40.639	ENSGAFG00000013053	-	52	40.639
ENSGAFG00000012977	-	100	38.983	ENSGAFG00000013055	-	84	38.983
ENSGAFG00000012977	-	87	35.882	ENSGAFG00000013462	-	70	35.882
ENSGAFG00000012977	-	93	38.521	ENSGAFG00000014362	-	61	38.521
ENSGAFG00000012977	-	89	40.000	ENSGAFG00000014369	-	98	40.000
ENSGAFG00000012977	-	88	42.642	ENSGAFG00000021139	-	89	42.642
ENSGAFG00000012977	-	89	43.363	ENSGAFG00000021132	-	64	39.548
ENSGAFG00000012977	-	87	38.866	ENSGAFG00000014085	-	69	38.866
ENSGAFG00000012977	-	86	40.079	ENSGAFG00000014088	-	65	40.079
ENSGAFG00000012977	-	87	40.000	ENSGAFG00000013006	-	70	40.000
ENSGAFG00000012977	-	90	42.784	ENSGAFG00000013000	-	66	42.784
ENSGAFG00000012977	-	97	42.515	ENSGAFG00000020499	-	67	42.515
ENSGAFG00000012977	-	86	42.273	ENSGAFG00000012733	-	67	42.273
ENSGAFG00000012977	-	86	41.014	ENSGAFG00000013408	-	91	35.840
ENSGAFG00000012977	-	87	37.719	ENSGAFG00000013116	-	65	37.719
ENSGAFG00000012977	-	85	40.260	ENSGAFG00000011278	-	68	40.260
ENSGAFG00000012977	-	87	39.095	ENSGAFG00000008204	-	66	39.095
ENSGAFG00000012977	-	88	39.216	ENSGAFG00000013452	-	72	39.216
ENSGAFG00000012977	-	88	34.417	ENSGAFG00000005337	-	84	34.048
ENSGAFG00000012977	-	96	48.077	ENSGAFG00000011884	-	99	41.964
ENSGAFG00000012977	-	89	38.719	ENSGAFG00000014413	-	75	39.007
ENSGAFG00000012977	-	98	36.646	ENSGAFG00000001402	-	77	36.232
ENSGAFG00000012977	-	86	44.444	ENSGAFG00000014563	-	53	44.444
ENSGAFG00000012977	-	98	41.085	ENSGAFG00000001481	-	83	45.249
ENSGAFG00000012977	-	99	42.520	ENSGAFG00000018820	-	81	42.520
ENSGAFG00000012977	-	86	41.667	ENSGAFG00000018663	-	58	41.667
ENSGAFG00000012977	-	90	39.755	ENSGAFG00000000037	-	69	39.755
ENSGAFG00000012977	-	86	34.653	ENSGAFG00000011290	-	60	34.653
ENSGAFG00000012977	-	86	45.399	ENSGAFG00000014188	-	94	46.914
ENSGAFG00000012977	-	99	35.756	ENSGAFG00000010983	-	98	42.584
ENSGAFG00000012977	-	86	38.710	ENSGAFG00000012083	-	50	38.710
ENSGAFG00000012977	-	86	41.152	ENSGAFG00000013396	-	76	41.152
ENSGAFG00000012977	-	88	38.710	ENSGAFG00000013390	-	65	40.909
ENSGAFG00000012977	-	86	38.028	ENSGAFG00000018659	-	99	38.028
ENSGAFG00000012977	-	87	39.929	ENSGAFG00000002659	-	66	37.363
ENSGAFG00000012977	-	86	41.667	ENSGAFG00000020507	-	52	37.056
ENSGAFG00000012977	-	86	45.249	ENSGAFG00000020501	-	50	45.249
ENSGAFG00000012977	-	89	47.024	ENSGAFG00000020509	-	79	47.024
ENSGAFG00000012977	-	99	38.974	ENSGAFG00000000266	-	86	38.974
ENSGAFG00000012977	-	87	41.518	ENSGAFG00000013066	-	68	41.518
ENSGAFG00000012977	-	88	30.993	ENSGAFG00000008457	zbtb41	63	30.993
ENSGAFG00000012977	-	88	42.534	ENSGAFG00000013934	-	98	39.474
ENSGAFG00000012977	-	89	32.984	ENSGAFG00000003108	-	87	31.707
ENSGAFG00000012977	-	85	39.819	ENSGAFG00000013471	-	72	36.842
ENSGAFG00000012977	-	93	45.238	ENSGAFG00000018645	-	65	45.238
ENSGAFG00000012977	-	88	42.553	ENSGAFG00000008226	-	73	42.553
ENSGAFG00000012977	-	84	45.455	ENSGAFG00000018508	-	91	45.455
ENSGAFG00000012977	-	87	40.000	ENSGAFG00000013624	-	53	39.103
ENSGAFG00000012977	-	88	43.636	ENSGAFG00000012767	-	72	44.162
ENSGAFG00000012977	-	92	40.385	ENSGAFG00000013019	-	96	40.291
ENSGAFG00000012977	-	96	43.885	ENSGAFG00000000521	-	87	43.885
ENSGAFG00000012977	-	86	40.711	ENSGAFG00000011940	-	70	40.711
ENSGAFG00000012977	-	89	45.455	ENSGAFG00000011174	-	92	45.455
ENSGAFG00000012977	-	86	34.859	ENSGAFG00000007110	-	66	34.859
ENSGAFG00000012977	-	86	45.575	ENSGAFG00000020505	-	66	45.763
ENSGAFG00000012977	-	90	46.330	ENSGAFG00000010637	-	85	46.330
ENSGAFG00000012977	-	87	40.909	ENSGAFG00000018063	GFI1	56	40.909
ENSGAFG00000012977	-	94	44.017	ENSGAFG00000020503	-	50	40.889
ENSGAFG00000012977	-	86	41.343	ENSGAFG00000007104	-	60	41.343
ENSGAFG00000012977	-	95	36.927	ENSGAFG00000003150	-	75	46.154
ENSGAFG00000012977	-	87	33.562	ENSGAFG00000019233	prdm5	72	33.904
ENSGAFG00000012977	-	97	45.045	ENSGAFG00000001879	-	91	45.045
ENSGAFG00000012977	-	87	42.202	ENSGAFG00000007528	-	60	42.202
ENSGAFG00000012977	-	86	40.841	ENSGAFG00000017761	-	90	40.841
ENSGAFG00000012977	-	87	45.882	ENSGAFG00000017066	-	67	45.882
ENSGAFG00000012977	-	86	35.753	ENSGAFG00000011906	-	63	37.758
ENSGAFG00000012977	-	88	33.333	ENSGAFG00000012945	-	57	34.656
ENSGAFG00000012977	-	99	42.857	ENSGAFG00000011913	si:ch211-161m3.4	98	42.857
ENSGAFG00000012977	-	88	37.243	ENSGAFG00000013420	-	69	36.599
ENSGAFG00000012977	-	86	34.247	ENSGAFG00000016981	-	84	33.981
ENSGAFG00000012977	-	86	38.636	ENSGAFG00000003059	gfi1b	81	38.636
ENSGAFG00000012977	-	91	42.857	ENSGAFG00000016595	-	85	44.550
ENSGAFG00000012977	-	91	46.914	ENSGAFG00000019072	-	85	46.429
ENSGAFG00000012977	-	86	37.366	ENSGAFG00000013616	-	72	37.366
ENSGAFG00000012977	-	89	37.802	ENSGAFG00000013491	-	69	37.802
ENSGAFG00000012977	-	89	39.100	ENSGAFG00000008231	-	69	39.100
ENSGAFG00000012977	-	93	37.681	ENSGAFG00000012069	-	88	43.915
ENSGAFG00000012977	-	88	35.821	ENSGAFG00000013911	-	99	35.821
ENSGAFG00000012977	-	96	45.972	ENSGAFG00000021131	-	98	45.972
ENSGAFG00000012977	-	84	39.316	ENSGAFG00000002346	wt1b	52	39.316
ENSGAFG00000012977	-	89	31.604	ENSGAFG00000010053	patz1	57	30.516
ENSGAFG00000012977	-	88	39.474	ENSGAFG00000013605	-	94	37.838
ENSGAFG00000012977	-	93	39.835	ENSGAFG00000011326	-	99	43.369
ENSGAFG00000012977	-	84	36.923	ENSGAFG00000021126	-	57	36.923
ENSGAFG00000012977	-	99	43.750	ENSGAFG00000011999	-	96	42.439
ENSGAFG00000012977	-	96	43.885	ENSGAFG00000014097	-	80	43.885
ENSGAFG00000012977	-	97	43.191	ENSGAFG00000008274	-	99	41.401
ENSGAFG00000012977	-	86	40.702	ENSGAFG00000011944	-	62	40.702
ENSGAFG00000012977	-	89	45.174	ENSGAFG00000016587	-	91	45.174
ENSGAFG00000012977	-	86	41.265	ENSGAFG00000016093	-	65	41.265
ENSGAFG00000012977	-	86	34.596	ENSGAFG00000016322	-	76	34.596
ENSGAFG00000012977	-	88	39.881	ENSGAFG00000013969	-	95	40.299
ENSGAFG00000012977	-	90	37.025	ENSGAFG00000012953	-	73	37.025
ENSGAFG00000012977	-	98	40.909	ENSGAFG00000012035	-	87	40.267
ENSGAFG00000012977	-	86	42.553	ENSGAFG00000016976	-	60	46.078
ENSGAFG00000012977	-	89	40.741	ENSGAFG00000007098	-	84	40.741
ENSGAFG00000012977	-	96	44.889	ENSGAFG00000011924	-	65	44.889
ENSGAFG00000012977	-	86	39.773	ENSGAFG00000014303	-	57	39.773
ENSGAFG00000012977	-	83	39.568	ENSGAFG00000007636	scrt1b	55	39.568
ENSGAFG00000012977	-	87	37.788	ENSGAFG00000005321	zbtb47b	81	37.788
ENSGAFG00000012977	-	96	41.667	ENSGAFG00000011938	-	74	41.667
ENSGAFG00000012977	-	87	40.856	ENSGAFG00000013048	-	71	40.856
ENSGAFG00000012977	-	79	37.838	ENSGAFG00000014410	-	93	37.838
ENSGAFG00000012977	-	87	39.514	ENSGAFG00000014419	-	61	41.667
ENSGAFG00000012977	-	83	39.130	ENSGAFG00000009650	-	52	39.130
ENSGAFG00000012977	-	86	40.873	ENSGAFG00000013069	-	63	40.873
ENSGAFG00000012977	-	86	40.078	ENSGAFG00000013457	-	58	40.078
ENSGAFG00000012977	-	89	43.350	ENSGAFG00000012004	-	55	43.350
ENSGAFG00000012977	-	86	37.872	ENSGAFG00000013430	-	86	37.872
ENSGAFG00000012977	-	94	39.831	ENSGAFG00000007532	-	86	39.831
ENSGAFG00000012977	-	97	37.360	ENSGAFG00000012987	-	79	37.360
ENSGAFG00000012977	-	85	41.667	ENSGAFG00000013438	-	91	41.667
ENSGAFG00000012977	-	87	39.545	ENSGAFG00000011287	-	53	39.545
ENSGAFG00000012977	-	86	38.781	ENSGAFG00000011288	-	81	38.781
ENSGAFG00000012977	-	97	43.396	ENSGAFG00000011965	-	87	43.320

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000012977	-	86	39.672	ENSAPOG00000013511	-	53	39.672	Acanthochromis_polyacanthus
ENSGAFG00000012977	-	98	79.192	ENSAPOG00000004328	-	99	79.192	Acanthochromis_polyacanthus
ENSGAFG00000012977	-	96	36.646	ENSACIG00000010739	-	94	36.646	Amphilophus_citrinellus
ENSGAFG00000012977	-	97	79.261	ENSAOCG00000007045	-	93	79.261	Amphiprion_ocellaris
ENSGAFG00000012977	-	96	78.821	ENSAPEG00000001596	-	81	78.821	Amphiprion_percula
ENSGAFG00000012977	-	89	35.733	ENSAPEG00000016483	-	63	37.838	Amphiprion_percula
ENSGAFG00000012977	-	100	77.734	ENSATEG00000006085	-	100	77.734	Anabas_testudineus
ENSGAFG00000012977	-	91	40.566	ENSACAG00000000082	-	99	41.412	Anolis_carolinensis
ENSGAFG00000012977	-	89	46.040	ENSACAG00000025537	-	100	46.040	Anolis_carolinensis
ENSGAFG00000012977	-	90	46.032	ENSAMXG00000036257	-	98	46.032	Astyanax_mexicanus
ENSGAFG00000012977	-	90	49.048	ENSAMXG00000035145	-	70	49.048	Astyanax_mexicanus
ENSGAFG00000012977	-	89	39.607	ENSAMXG00000026143	-	97	37.011	Astyanax_mexicanus
ENSGAFG00000012977	-	90	47.586	ENSAMXG00000033013	-	84	47.586	Astyanax_mexicanus
ENSGAFG00000012977	-	90	46.725	ENSAMXG00000012873	-	91	46.725	Astyanax_mexicanus
ENSGAFG00000012977	-	89	47.015	ENSAMXG00000035949	-	81	47.015	Astyanax_mexicanus
ENSGAFG00000012977	-	89	47.391	ENSAMXG00000032237	-	97	42.532	Astyanax_mexicanus
ENSGAFG00000012977	-	100	82.970	ENSCVAG00000011235	-	100	83.168	Cyprinodon_variegatus
ENSGAFG00000012977	-	86	39.306	ENSELUG00000013844	-	90	33.333	Esox_lucius
ENSGAFG00000012977	-	89	41.096	ENSELUG00000013357	-	91	37.381	Esox_lucius
ENSGAFG00000012977	-	90	38.920	ENSELUG00000021287	-	81	40.741	Esox_lucius
ENSGAFG00000012977	-	87	37.965	ENSFHEG00000019915	-	94	37.097	Fundulus_heteroclitus
ENSGAFG00000012977	-	89	41.991	ENSGMOG00000003238	-	100	41.631	Gadus_morhua
ENSGAFG00000012977	-	92	40.288	ENSIPUG00000006916	-	83	40.288	Ictalurus_punctatus
ENSGAFG00000012977	-	97	47.264	ENSIPUG00000021556	-	96	47.264	Ictalurus_punctatus
ENSGAFG00000012977	-	93	45.283	ENSIPUG00000004428	-	81	45.283	Ictalurus_punctatus
ENSGAFG00000012977	-	100	77.691	ENSKMAG00000004988	-	100	77.691	Kryptolebias_marmoratus
ENSGAFG00000012977	-	91	43.590	ENSLOCG00000014366	-	94	43.590	Lepisosteus_oculatus
ENSGAFG00000012977	-	90	39.103	ENSLOCG00000014144	-	100	37.647	Lepisosteus_oculatus
ENSGAFG00000012977	-	88	39.403	ENSMAMG00000016542	-	60	39.403	Mastacembelus_armatus
ENSGAFG00000012977	-	100	78.529	ENSMAMG00000019301	-	100	78.529	Mastacembelus_armatus
ENSGAFG00000012977	-	92	38.235	ENSMMOG00000009852	-	92	38.235	Mola_mola
ENSGAFG00000012977	-	90	42.802	ENSMALG00000005554	-	98	40.889	Monopterus_albus
ENSGAFG00000012977	-	90	44.275	ENSOCUG00000005876	-	100	44.286	Oryctolagus_cuniculus
ENSGAFG00000012977	-	89	39.541	ENSPKIG00000006616	-	63	39.541	Paramormyrops_kingsleyae
ENSGAFG00000012977	-	86	36.010	ENSPMGG00000017633	-	88	36.842	Periophthalmus_magnuspinnatus
ENSGAFG00000012977	-	100	96.185	ENSPFOG00000010682	-	100	96.185	Poecilia_formosa
ENSGAFG00000012977	-	90	38.674	ENSPLAG00000002892	-	69	38.674	Poecilia_latipinna
ENSGAFG00000012977	-	100	95.984	ENSPMEG00000001399	-	100	95.984	Poecilia_mexicana
ENSGAFG00000012977	-	100	96.586	ENSPREG00000001386	-	100	96.586	Poecilia_reticulata
ENSGAFG00000012977	-	94	37.500	ENSPREG00000002582	-	68	36.555	Poecilia_reticulata
ENSGAFG00000012977	-	86	47.807	ENSPNAG00000015116	-	68	47.807	Pygocentrus_nattereri
ENSGAFG00000012977	-	89	42.683	ENSPNAG00000000219	-	88	42.683	Pygocentrus_nattereri
ENSGAFG00000012977	-	90	39.493	ENSPNAG00000025570	-	82	39.493	Pygocentrus_nattereri
ENSGAFG00000012977	-	96	42.338	ENSSFOG00015006108	-	59	42.338	Scleropages_formosus
ENSGAFG00000012977	-	90	44.379	ENSSMAG00000009115	-	84	51.786	Scophthalmus_maximus
ENSGAFG00000012977	-	79	51.613	ENSSDUG00000002195	-	86	51.613	Seriola_dumerili
ENSGAFG00000012977	-	100	78.529	ENSSDUG00000006463	-	100	78.529	Seriola_dumerili
ENSGAFG00000012977	-	91	40.615	ENSSLDG00000020727	-	97	40.615	Seriola_lalandi_dorsalis
ENSGAFG00000012977	-	100	77.932	ENSSLDG00000006724	-	100	74.269	Seriola_lalandi_dorsalis
ENSGAFG00000012977	-	88	38.647	ENSSPAG00000012960	-	82	38.647	Stegastes_partitus
ENSGAFG00000012977	-	86	49.524	ENSSPAG00000021008	-	91	45.318	Stegastes_partitus
ENSGAFG00000012977	-	95	39.286	ENSTRUG00000005321	-	97	39.777	Takifugu_rubripes
ENSGAFG00000012977	-	91	36.778	ENSTRUG00000021675	-	92	36.778	Takifugu_rubripes
ENSGAFG00000012977	-	87	41.048	ENSTNIG00000008200	-	100	41.048	Tetraodon_nigroviridis
ENSGAFG00000012977	-	89	45.946	ENSTNIG00000000320	-	100	45.946	Tetraodon_nigroviridis
ENSGAFG00000012977	-	90	41.042	ENSXETG00000006575	znf420	81	41.042	Xenopus_tropicalis
ENSGAFG00000012977	-	90	40.418	ENSXCOG00000009665	-	98	46.591	Xiphophorus_couchianus
ENSGAFG00000012977	-	100	97.390	ENSXMAG00000028625	-	100	97.390	Xiphophorus_maculatus