EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000013048 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 2626 bases
Position: chrNHOQ01000064.1:306757-309382
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019314	zf-C2H2	PF00096.26	9.5e-37	1	6
ENSGAFP00000019314	zf-C2H2	PF00096.26	9.5e-37	2	6
ENSGAFP00000019314	zf-C2H2	PF00096.26	9.5e-37	3	6
ENSGAFP00000019314	zf-C2H2	PF00096.26	9.5e-37	4	6
ENSGAFP00000019314	zf-C2H2	PF00096.26	9.5e-37	5	6
ENSGAFP00000019314	zf-C2H2	PF00096.26	9.5e-37	6	6
ENSGAFP00000019314	zf-met	PF12874.7	5.9e-15	1	3
ENSGAFP00000019314	zf-met	PF12874.7	5.9e-15	2	3
ENSGAFP00000019314	zf-met	PF12874.7	5.9e-15	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019497	-	1931	-	ENSGAFP00000019314	413 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013048's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013048's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000013048	-	99	38.303	ENSGAFG00000013452	-	93	38.479
ENSGAFG00000013048	-	69	49.000	ENSGAFG00000011913	si:ch211-161m3.4	77	49.000
ENSGAFG00000013048	-	92	33.411	ENSGAFG00000011287	-	96	33.649
ENSGAFG00000013048	-	99	44.086	ENSGAFG00000011288	-	97	45.520
ENSGAFG00000013048	-	72	36.986	ENSGAFG00000005321	zbtb47b	80	36.986
ENSGAFG00000013048	-	96	60.623	ENSGAFG00000013019	-	93	59.318
ENSGAFG00000013048	-	66	41.060	ENSGAFG00000003059	gfi1b	72	41.060
ENSGAFG00000013048	-	94	44.534	ENSGAFG00000011999	-	96	36.294
ENSGAFG00000013048	-	71	40.856	ENSGAFG00000012977	-	87	40.856
ENSGAFG00000013048	-	77	43.541	ENSGAFG00000001481	-	89	43.541
ENSGAFG00000013048	-	69	44.578	ENSGAFG00000003150	-	96	39.216
ENSGAFG00000013048	-	98	52.709	ENSGAFG00000013006	-	96	51.724
ENSGAFG00000013048	-	73	37.818	ENSGAFG00000021891	znf319b	87	35.738
ENSGAFG00000013048	-	76	45.503	ENSGAFG00000013430	-	81	45.503
ENSGAFG00000013048	-	97	35.897	ENSGAFG00000007110	-	84	39.100
ENSGAFG00000013048	-	73	41.935	ENSGAFG00000019233	prdm5	67	41.935
ENSGAFG00000013048	-	69	33.173	ENSGAFG00000015673	PRDM15	56	33.173
ENSGAFG00000013048	-	92	46.903	ENSGAFG00000021131	-	71	49.104
ENSGAFG00000013048	-	68	44.048	ENSGAFG00000021139	-	87	44.048
ENSGAFG00000013048	-	94	42.534	ENSGAFG00000008204	-	86	44.493
ENSGAFG00000013048	-	99	49.603	ENSGAFG00000016093	-	63	49.603
ENSGAFG00000013048	-	94	42.444	ENSGAFG00000011906	-	77	43.816
ENSGAFG00000013048	-	97	42.652	ENSGAFG00000013491	-	96	42.652
ENSGAFG00000013048	-	94	44.040	ENSGAFG00000008231	-	87	46.071
ENSGAFG00000013048	-	98	35.492	ENSGAFG00000011938	-	97	42.986
ENSGAFG00000013048	-	74	42.718	ENSGAFG00000016587	-	93	42.718
ENSGAFG00000013048	-	81	43.443	ENSGAFG00000011965	-	86	47.664
ENSGAFG00000013048	-	68	49.821	ENSGAFG00000007098	-	77	49.821
ENSGAFG00000013048	-	70	35.714	ENSGAFG00000008457	zbtb41	55	35.714
ENSGAFG00000013048	-	71	30.151	ENSGAFG00000004250	hinfp	54	30.151
ENSGAFG00000013048	-	99	34.273	ENSGAFG00000014097	-	94	39.921
ENSGAFG00000013048	-	66	46.970	ENSGAFG00000018645	-	65	44.811
ENSGAFG00000013048	-	98	40.984	ENSGAFG00000014085	-	94	41.245
ENSGAFG00000013048	-	98	53.659	ENSGAFG00000013055	-	99	53.659
ENSGAFG00000013048	-	66	46.491	ENSGAFG00000007528	-	59	46.491
ENSGAFG00000013048	-	96	44.737	ENSGAFG00000018422	-	76	44.737
ENSGAFG00000013048	-	80	36.458	ENSGAFG00000003108	-	76	36.449
ENSGAFG00000013048	-	98	37.220	ENSGAFG00000013462	-	93	32.151
ENSGAFG00000013048	-	99	31.735	ENSGAFG00000012733	-	97	33.103
ENSGAFG00000013048	-	79	37.273	ENSGAFG00000021427	snai2	53	38.060
ENSGAFG00000013048	-	66	45.455	ENSGAFG00000010637	-	76	45.455
ENSGAFG00000013048	-	65	43.827	ENSGAFG00000011278	-	66	43.312
ENSGAFG00000013048	-	100	42.727	ENSGAFG00000010983	-	85	42.727
ENSGAFG00000013048	-	93	43.062	ENSGAFG00000020503	-	79	43.062
ENSGAFG00000013048	-	98	47.644	ENSGAFG00000013969	-	94	49.000
ENSGAFG00000013048	-	99	37.500	ENSGAFG00000013457	-	89	36.768
ENSGAFG00000013048	-	96	44.889	ENSGAFG00000016976	-	87	44.889
ENSGAFG00000013048	-	82	45.161	ENSGAFG00000017761	-	89	45.161
ENSGAFG00000013048	-	94	45.909	ENSGAFG00000016595	-	96	45.909
ENSGAFG00000013048	-	99	44.765	ENSGAFG00000007104	-	91	46.886
ENSGAFG00000013048	-	70	44.843	ENSGAFG00000012767	-	73	46.400
ENSGAFG00000013048	-	99	42.292	ENSGAFG00000013616	-	95	43.011
ENSGAFG00000013048	-	98	41.870	ENSGAFG00000011290	-	91	41.870
ENSGAFG00000013048	-	99	52.897	ENSGAFG00000013069	-	97	51.896
ENSGAFG00000013048	-	67	46.218	ENSGAFG00000018663	-	74	46.218
ENSGAFG00000013048	-	99	36.806	ENSGAFG00000013390	-	93	36.552
ENSGAFG00000013048	-	97	42.222	ENSGAFG00000013396	-	94	42.222
ENSGAFG00000013048	-	94	45.221	ENSGAFG00000013934	-	99	44.690
ENSGAFG00000013048	-	97	46.667	ENSGAFG00000020499	-	60	46.667
ENSGAFG00000013048	-	97	52.336	ENSGAFG00000012987	-	90	52.336
ENSGAFG00000013048	-	97	46.718	ENSGAFG00000011326	-	98	47.253
ENSGAFG00000013048	-	99	40.103	ENSGAFG00000019072	-	81	49.451
ENSGAFG00000013048	-	79	37.318	ENSGAFG00000013408	-	91	43.431
ENSGAFG00000013048	-	68	43.791	ENSGAFG00000013438	-	85	43.636
ENSGAFG00000013048	-	92	45.935	ENSGAFG00000014413	-	94	45.935
ENSGAFG00000013048	-	60	40.994	ENSGAFG00000020507	-	52	40.994
ENSGAFG00000013048	-	99	46.512	ENSGAFG00000013363	-	74	46.512
ENSGAFG00000013048	-	90	34.091	ENSGAFG00000003093	scrt2	55	34.091
ENSGAFG00000013048	-	98	38.333	ENSGAFG00000014088	-	90	38.095
ENSGAFG00000013048	-	99	49.423	ENSGAFG00000013053	-	67	47.581
ENSGAFG00000013048	-	68	37.349	ENSGAFG00000005337	-	72	39.526
ENSGAFG00000013048	-	99	46.332	ENSGAFG00000021132	-	56	46.886
ENSGAFG00000013048	-	68	42.857	ENSGAFG00000007532	-	74	43.704
ENSGAFG00000013048	-	66	44.853	ENSGAFG00000001879	-	57	44.030
ENSGAFG00000013048	-	92	41.951	ENSGAFG00000012004	-	77	45.771
ENSGAFG00000013048	-	66	32.422	ENSGAFG00000003119	-	60	32.422
ENSGAFG00000013048	-	99	42.652	ENSGAFG00000001402	-	94	42.652
ENSGAFG00000013048	-	68	44.242	ENSGAFG00000011174	-	63	44.242
ENSGAFG00000013048	-	98	47.482	ENSGAFG00000013471	-	92	47.482
ENSGAFG00000013048	-	99	45.312	ENSGAFG00000013677	-	99	45.312
ENSGAFG00000013048	-	90	44.828	ENSGAFG00000001156	-	59	45.421
ENSGAFG00000013048	-	69	41.667	ENSGAFG00000000285	si:dkeyp-113d7.1	52	41.667
ENSGAFG00000013048	-	86	43.359	ENSGAFG00000018820	-	89	43.165
ENSGAFG00000013048	-	94	45.725	ENSGAFG00000012069	-	98	45.725
ENSGAFG00000013048	-	67	34.483	ENSGAFG00000009650	-	59	34.483
ENSGAFG00000013048	-	98	45.055	ENSGAFG00000008274	-	97	44.747
ENSGAFG00000013048	-	77	38.356	ENSGAFG00000016981	-	75	38.356
ENSGAFG00000013048	-	99	67.725	ENSGAFG00000013000	-	96	67.725
ENSGAFG00000013048	-	77	44.186	ENSGAFG00000013911	-	97	44.186
ENSGAFG00000013048	-	99	42.510	ENSGAFG00000013420	-	94	42.510
ENSGAFG00000013048	-	76	46.108	ENSGAFG00000020509	-	86	46.108
ENSGAFG00000013048	-	96	39.394	ENSGAFG00000020501	-	76	39.394
ENSGAFG00000013048	-	66	41.633	ENSGAFG00000020505	-	58	44.681
ENSGAFG00000013048	-	99	46.154	ENSGAFG00000013624	-	74	42.373
ENSGAFG00000013048	-	99	49.038	ENSGAFG00000011884	-	99	47.670
ENSGAFG00000013048	-	53	42.308	ENSGAFG00000021126	-	59	34.177
ENSGAFG00000013048	-	99	43.580	ENSGAFG00000000037	-	98	45.520
ENSGAFG00000013048	-	98	45.745	ENSGAFG00000008226	-	90	45.745
ENSGAFG00000013048	-	68	45.020	ENSGAFG00000018659	-	99	45.020
ENSGAFG00000013048	-	98	45.703	ENSGAFG00000012035	-	89	45.798
ENSGAFG00000013048	-	81	40.441	ENSGAFG00000000521	-	64	40.690
ENSGAFG00000013048	-	78	39.919	ENSGAFG00000012934	-	75	39.919
ENSGAFG00000013048	-	99	56.190	ENSGAFG00000013066	-	97	55.476
ENSGAFG00000013048	-	74	39.286	ENSGAFG00000014410	-	88	39.286
ENSGAFG00000013048	-	98	43.182	ENSGAFG00000014419	-	93	43.182
ENSGAFG00000013048	-	99	46.352	ENSGAFG00000014188	-	100	46.383
ENSGAFG00000013048	-	68	37.126	ENSGAFG00000010053	patz1	53	31.841
ENSGAFG00000013048	-	99	38.287	ENSGAFG00000011944	-	75	46.043
ENSGAFG00000013048	-	99	46.371	ENSGAFG00000011940	-	92	46.371
ENSGAFG00000013048	-	98	51.765	ENSGAFG00000018302	-	97	51.765
ENSGAFG00000013048	-	89	31.724	ENSGAFG00000007636	scrt1b	56	33.129
ENSGAFG00000013048	-	68	44.059	ENSGAFG00000000266	-	72	44.059
ENSGAFG00000013048	-	69	43.056	ENSGAFG00000012953	-	76	43.056
ENSGAFG00000013048	-	83	40.143	ENSGAFG00000002659	-	71	37.458
ENSGAFG00000013048	-	68	49.372	ENSGAFG00000011924	-	66	49.372
ENSGAFG00000013048	-	98	45.181	ENSGAFG00000014563	-	95	44.379
ENSGAFG00000013048	-	98	35.270	ENSGAFG00000014369	-	94	45.641
ENSGAFG00000013048	-	98	42.857	ENSGAFG00000012083	-	96	42.857
ENSGAFG00000013048	-	74	38.462	ENSGAFG00000016322	-	69	38.462
ENSGAFG00000013048	-	88	49.533	ENSGAFG00000021143	-	64	49.533
ENSGAFG00000013048	-	68	46.429	ENSGAFG00000021140	-	99	46.429
ENSGAFG00000013048	-	68	35.517	ENSGAFG00000012945	-	56	35.517
ENSGAFG00000013048	-	68	41.392	ENSGAFG00000016347	znf668	83	40.569
ENSGAFG00000013048	-	73	43.969	ENSGAFG00000013605	-	99	43.969
ENSGAFG00000013048	-	99	35.135	ENSGAFG00000014362	-	92	35.714
ENSGAFG00000013048	-	66	32.995	ENSGAFG00000016353	-	74	34.375
ENSGAFG00000013048	-	69	44.206	ENSGAFG00000013116	-	56	44.206

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013048	-	68	49.020	ENSAMXG00000000353	-	93	49.020	Astyanax_mexicanus
ENSGAFG00000013048	-	82	46.502	ENSAMXG00000029783	-	88	44.483	Astyanax_mexicanus
ENSGAFG00000013048	-	72	46.602	ENSAMXG00000043019	-	91	46.602	Astyanax_mexicanus
ENSGAFG00000013048	-	81	46.914	ENSAMXG00000034096	-	87	47.154	Astyanax_mexicanus
ENSGAFG00000013048	-	68	43.972	ENSAMXG00000044028	-	95	45.818	Astyanax_mexicanus
ENSGAFG00000013048	-	68	44.912	ENSBTAG00000014593	-	78	48.352	Bos_taurus
ENSGAFG00000013048	-	68	47.656	ENSBTAG00000040358	-	100	47.656	Bos_taurus
ENSGAFG00000013048	-	77	44.444	ENSCSAG00000000471	-	98	44.444	Chlorocebus_sabaeus
ENSGAFG00000013048	-	82	42.126	ENSCPBG00000002430	-	78	47.280	Chrysemys_picta_bellii
ENSGAFG00000013048	-	83	39.927	ENSCPBG00000009609	-	86	39.927	Chrysemys_picta_bellii
ENSGAFG00000013048	-	69	37.436	ENSDNOG00000047529	-	69	37.436	Dasypus_novemcinctus
ENSGAFG00000013048	-	69	47.038	ENSDNOG00000042588	-	80	47.038	Dasypus_novemcinctus
ENSGAFG00000013048	-	68	40.079	ENSEBUG00000016969	-	77	40.079	Eptatretus_burgeri
ENSGAFG00000013048	-	67	50.943	ENSEBUG00000013221	-	80	50.943	Eptatretus_burgeri
ENSGAFG00000013048	-	66	42.986	ENSEBUG00000016164	-	94	42.986	Eptatretus_burgeri
ENSGAFG00000013048	-	92	38.019	ENSELUG00000019008	-	86	42.751	Esox_lucius
ENSGAFG00000013048	-	68	44.867	ENSFCAG00000043966	-	99	44.867	Felis_catus
ENSGAFG00000013048	-	68	45.161	ENSGGOG00000042802	-	98	45.161	Gorilla_gorilla
ENSGAFG00000013048	-	94	47.471	ENSHCOG00000014713	-	98	49.104	Hippocampus_comes
ENSGAFG00000013048	-	68	50.179	ENSHCOG00000019512	-	90	50.179	Hippocampus_comes
ENSGAFG00000013048	-	70	44.444	ENSMFAG00000008648	-	98	44.444	Macaca_fascicularis
ENSGAFG00000013048	-	70	44.444	ENSMNEG00000001556	-	98	44.444	Macaca_nemestrina
ENSGAFG00000013048	-	70	44.444	ENSMLEG00000007035	-	98	44.444	Mandrillus_leucophaeus
ENSGAFG00000013048	-	68	43.321	ENSMAUG00000015263	-	66	43.321	Mesocricetus_auratus
ENSGAFG00000013048	-	73	42.857	ENSMOCG00000003394	-	65	42.857	Microtus_ochrogaster
ENSGAFG00000013048	-	81	45.620	ENSMODG00000028916	-	62	45.620	Monodelphis_domestica
ENSGAFG00000013048	-	69	46.259	ENSMPUG00000006562	-	56	46.259	Mustela_putorius_furo
ENSGAFG00000013048	-	95	46.561	ENSNBRG00000010194	-	98	46.316	Neolamprologus_brichardi
ENSGAFG00000013048	-	70	44.803	ENSNLEG00000018988	-	98	44.803	Nomascus_leucogenys
ENSGAFG00000013048	-	68	44.444	ENSMEUG00000012153	-	62	44.444	Notamacropus_eugenii
ENSGAFG00000013048	-	72	44.030	ENSMEUG00000006978	-	81	45.865	Notamacropus_eugenii
ENSGAFG00000013048	-	68	38.974	ENSOGAG00000024538	-	59	39.640	Otolemur_garnettii
ENSGAFG00000013048	-	70	45.161	ENSPPAG00000014496	-	98	45.161	Pan_paniscus
ENSGAFG00000013048	-	70	44.803	ENSPANG00000030207	-	98	44.803	Papio_anubis
ENSGAFG00000013048	-	73	49.004	ENSPSIG00000010405	-	99	47.810	Pelodiscus_sinensis
ENSGAFG00000013048	-	87	40.116	ENSPSIG00000009650	-	63	42.652	Pelodiscus_sinensis
ENSGAFG00000013048	-	69	43.321	ENSPEMG00000010242	-	62	43.321	Peromyscus_maniculatus_bairdii
ENSGAFG00000013048	-	68	47.085	ENSPLAG00000021062	-	88	48.800	Poecilia_latipinna
ENSGAFG00000013048	-	99	93.204	ENSPLAG00000020710	-	100	93.204	Poecilia_latipinna
ENSGAFG00000013048	-	99	45.614	ENSPLAG00000010389	-	99	38.750	Poecilia_latipinna
ENSGAFG00000013048	-	75	47.273	ENSPCAG00000009106	-	74	47.273	Procavia_capensis
ENSGAFG00000013048	-	73	36.879	ENSPNYG00000024243	-	92	36.879	Pundamilia_nyererei
ENSGAFG00000013048	-	73	45.882	ENSPNAG00000018644	-	98	45.882	Pygocentrus_nattereri
ENSGAFG00000013048	-	82	43.369	ENSSHAG00000001415	-	83	43.369	Sarcophilus_harrisii
ENSGAFG00000013048	-	99	46.953	ENSSDUG00000009534	-	88	46.953	Seriola_dumerili
ENSGAFG00000013048	-	90	45.064	ENSSLDG00000013760	-	95	43.956	Seriola_lalandi_dorsalis
ENSGAFG00000013048	-	75	44.186	ENSSPUG00000007147	-	84	44.186	Sphenodon_punctatus
ENSGAFG00000013048	-	94	46.429	ENSTRUG00000006896	-	96	45.421	Takifugu_rubripes
ENSGAFG00000013048	-	72	45.018	ENSVPAG00000011867	-	86	45.018	Vicugna_pacos
ENSGAFG00000013048	-	98	50.000	ENSXCOG00000009794	-	92	49.835	Xiphophorus_couchianus