EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000013059 (Gene tree)
Gene ID: -
Gene Symbol: npm1a
Alias: npm1|sb:cb487
Full Name: nucleophosmin 1a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7052 bases
Position: chrNHOQ01001678.1:6056603-6063654
Accession: ZDB-GENE-021028-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019341	Nucleoplasmin	PF03066.15	6.1e-32	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019524	-	2695	-	ENSGAFP00000019341	302 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013059's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013059's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000013059	npm1a	97	40.066	ENSGAFG00000017709	npm1b	96	39.735

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013059	npm1a	100	67.320	ENSAPOG00000002813	npm1a	100	68.301	Acanthochromis_polyacanthus
ENSGAFG00000013059	npm1a	94	69.014	ENSACIG00000014201	npm1a	100	69.014	Amphilophus_citrinellus
ENSGAFG00000013059	npm1a	88	61.798	ENSAOCG00000004978	npm1a	99	61.798	Amphiprion_ocellaris
ENSGAFG00000013059	npm1a	100	67.434	ENSAPEG00000008594	npm1a	100	67.763	Amphiprion_percula
ENSGAFG00000013059	npm1a	100	67.308	ENSATEG00000008885	npm1a	99	67.532	Anabas_testudineus
ENSGAFG00000013059	npm1a	95	62.153	ENSACLG00000008376	npm1a	94	62.847	Astatotilapia_calliptera
ENSGAFG00000013059	npm1a	99	48.667	ENSAMXG00000010155	npm1a	98	51.351	Astyanax_mexicanus
ENSGAFG00000013059	npm1a	100	54.967	ENSCSEG00000011165	npm1a	82	77.049	Cynoglossus_semilaevis
ENSGAFG00000013059	npm1a	100	69.307	ENSCVAG00000008960	npm1a	100	69.307	Cyprinodon_variegatus
ENSGAFG00000013059	npm1a	98	59.797	ENSDARG00000014329	npm1a	94	67.532	Danio_rerio
ENSGAFG00000013059	npm1a	95	34.462	ENSEBUG00000012753	npm1a	93	34.356	Eptatretus_burgeri
ENSGAFG00000013059	npm1a	100	61.311	ENSELUG00000013705	npm1a	100	61.639	Esox_lucius
ENSGAFG00000013059	npm1a	100	71.947	ENSFHEG00000012496	npm1a	100	71.617	Fundulus_heteroclitus
ENSGAFG00000013059	npm1a	99	62.126	ENSGACG00000020319	npm1a	99	61.538	Gasterosteus_aculeatus
ENSGAFG00000013059	npm1a	99	66.246	ENSHBUG00000000776	npm1a	100	65.300	Haplochromis_burtoni
ENSGAFG00000013059	npm1a	100	51.935	ENSHCOG00000001059	npm1a	100	52.258	Hippocampus_comes
ENSGAFG00000013059	npm1a	98	57.237	ENSIPUG00000019452	npm1	99	57.566	Ictalurus_punctatus
ENSGAFG00000013059	npm1a	100	69.205	ENSKMAG00000010709	npm1a	100	66.887	Kryptolebias_marmoratus
ENSGAFG00000013059	npm1a	100	66.118	ENSLBEG00000008793	npm1a	100	66.776	Labrus_bergylta
ENSGAFG00000013059	npm1a	85	53.455	ENSLOCG00000009683	npm1a	100	53.846	Lepisosteus_oculatus
ENSGAFG00000013059	npm1a	100	67.657	ENSMAMG00000009344	npm1a	83	67.657	Mastacembelus_armatus
ENSGAFG00000013059	npm1a	99	64.241	ENSMZEG00005013717	npm1a	100	64.873	Maylandia_zebra
ENSGAFG00000013059	npm1a	95	64.236	ENSMMOG00000007980	npm1a	100	63.889	Mola_mola
ENSGAFG00000013059	npm1a	100	64.052	ENSMALG00000001146	npm1a	100	67.647	Monopterus_albus
ENSGAFG00000013059	npm1a	99	62.579	ENSNBRG00000013172	npm1a	100	62.264	Neolamprologus_brichardi
ENSGAFG00000013059	npm1a	99	65.000	ENSONIG00000001860	npm1a	98	65.461	Oreochromis_niloticus
ENSGAFG00000013059	npm1a	100	68.317	ENSORLG00000010179	npm1a	100	68.317	Oryzias_latipes
ENSGAFG00000013059	npm1a	100	67.987	ENSORLG00020020817	npm1a	100	68.317	Oryzias_latipes_hni
ENSGAFG00000013059	npm1a	100	68.317	ENSORLG00015003439	npm1a	100	68.647	Oryzias_latipes_hsok
ENSGAFG00000013059	npm1a	100	66.667	ENSOMEG00000007083	npm1a	100	66.667	Oryzias_melastigma
ENSGAFG00000013059	npm1a	100	55.340	ENSPKIG00000023943	npm1a	100	55.340	Paramormyrops_kingsleyae
ENSGAFG00000013059	npm1a	100	85.430	ENSPFOG00000019173	npm1a	100	85.762	Poecilia_formosa
ENSGAFG00000013059	npm1a	100	82.237	ENSPLAG00000001093	npm1a	100	82.895	Poecilia_latipinna
ENSGAFG00000013059	npm1a	100	85.430	ENSPMEG00000012523	npm1a	100	85.762	Poecilia_mexicana
ENSGAFG00000013059	npm1a	100	86.755	ENSPREG00000001647	npm1a	100	86.424	Poecilia_reticulata
ENSGAFG00000013059	npm1a	99	67.949	ENSPNYG00000019321	npm1a	100	66.026	Pundamilia_nyererei
ENSGAFG00000013059	npm1a	99	52.288	ENSPNAG00000026891	npm1a	99	54.098	Pygocentrus_nattereri
ENSGAFG00000013059	npm1a	100	55.738	ENSSFOG00015007074	npm1a	100	55.410	Scleropages_formosus
ENSGAFG00000013059	npm1a	100	67.320	ENSSMAG00000019090	npm1a	100	67.320	Scophthalmus_maximus
ENSGAFG00000013059	npm1a	100	66.997	ENSSDUG00000015609	npm1a	100	66.997	Seriola_dumerili
ENSGAFG00000013059	npm1a	100	67.327	ENSSLDG00000017849	npm1a	100	66.997	Seriola_lalandi_dorsalis
ENSGAFG00000013059	npm1a	100	53.642	ENSSPAG00000021660	npm1a	100	59.736	Stegastes_partitus
ENSGAFG00000013059	npm1a	100	64.286	ENSTRUG00000024003	npm1a	100	65.260	Takifugu_rubripes
ENSGAFG00000013059	npm1a	100	64.686	ENSTNIG00000010773	npm1a	100	64.356	Tetraodon_nigroviridis
ENSGAFG00000013059	npm1a	93	83.566	ENSXCOG00000005958	npm1a	100	82.168	Xiphophorus_couchianus
ENSGAFG00000013059	npm1a	100	86.513	ENSXMAG00000000396	npm1a	100	87.500	Xiphophorus_maculatus