EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000013094 (Gene tree)
Gene ID: -
Gene Symbol: cnot3a
Alias: fb73b06|fc17h07|wu:fb73b06|wu:fc17h07|zgc:92813
Full Name: CCR4-NOT transcription complex%2C subunit 3a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 14639 bases
Position: chrNHOQ01001560.1:2110004-2124642
Accession: ZDB-GENE-040927-6
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019384	Not3	PF04065.15	9.1e-97	1	1
ENSGAFP00000019401	Not3	PF04065.15	1.9e-79	1	2
ENSGAFP00000019401	Not3	PF04065.15	1.9e-79	2	2
ENSGAFP00000019401	NOT2_3_5	PF04153.18	3.6e-38	1	1
ENSGAFP00000019384	NOT2_3_5	PF04153.18	3.8e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019567	-	5564	-	ENSGAFP00000019384	899 (aa)	-	UPI000DD19C28
ENSGAFT00000019584	-	5504	-	ENSGAFP00000019401	879 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013094's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013094's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013094	cnot3a	76	74.177	ENSG00000088038	CNOT3	100	94.330	Homo_sapiens
ENSGAFG00000013094	cnot3a	58	88.612	ENSAPOG00000015499	CNOT3	92	88.612	Acanthochromis_polyacanthus
ENSGAFG00000013094	cnot3a	57	88.809	ENSAPOG00000015002	cnot3b	76	88.809	Acanthochromis_polyacanthus
ENSGAFG00000013094	cnot3a	68	88.103	ENSAMEG00000004528	CNOT3	76	89.508	Ailuropoda_melanoleuca
ENSGAFG00000013094	cnot3a	100	86.980	ENSACIG00000006635	cnot3a	100	92.913	Amphilophus_citrinellus
ENSGAFG00000013094	cnot3a	60	92.411	ENSACIG00000003652	cnot3b	98	91.630	Amphilophus_citrinellus
ENSGAFG00000013094	cnot3a	97	60.286	ENSAOCG00000018385	-	99	74.554	Amphiprion_ocellaris
ENSGAFG00000013094	cnot3a	99	84.521	ENSAOCG00000023769	cnot3a	99	85.523	Amphiprion_ocellaris
ENSGAFG00000013094	cnot3a	97	62.582	ENSAPEG00000002640	cnot3b	78	89.333	Amphiprion_percula
ENSGAFG00000013094	cnot3a	100	85.730	ENSAPEG00000006624	cnot3a	100	87.638	Amphiprion_percula
ENSGAFG00000013094	cnot3a	100	87.033	ENSATEG00000022737	cnot3a	100	88.339	Anabas_testudineus
ENSGAFG00000013094	cnot3a	66	88.103	ENSACAG00000016085	CNOT3	97	89.508	Anolis_carolinensis
ENSGAFG00000013094	cnot3a	68	89.180	ENSANAG00000025756	CNOT3	78	89.180	Aotus_nancymaae
ENSGAFG00000013094	cnot3a	100	88.268	ENSACLG00000021136	cnot3a	100	88.925	Astatotilapia_calliptera
ENSGAFG00000013094	cnot3a	100	72.425	ENSAMXG00000012359	cnot3a	59	66.475	Astyanax_mexicanus
ENSGAFG00000013094	cnot3a	100	66.000	ENSAMXG00000009447	cnot3b	70	89.730	Astyanax_mexicanus
ENSGAFG00000013094	cnot3a	68	88.103	ENSBTAG00000014900	CNOT3	86	89.180	Bos_taurus
ENSGAFG00000013094	cnot3a	68	89.180	ENSCJAG00000001094	CNOT3	75	89.180	Callithrix_jacchus
ENSGAFG00000013094	cnot3a	68	89.180	ENSCAFG00000002699	CNOT3	75	89.180	Canis_familiaris
ENSGAFG00000013094	cnot3a	68	89.180	ENSCAFG00020018359	CNOT3	75	89.180	Canis_lupus_dingo
ENSGAFG00000013094	cnot3a	63	86.129	ENSCHIG00000015302	CNOT3	77	87.171	Capra_hircus
ENSGAFG00000013094	cnot3a	68	87.781	ENSTSYG00000008058	CNOT3	76	89.180	Carlito_syrichta
ENSGAFG00000013094	cnot3a	68	88.103	ENSCAPG00000009533	CNOT3	85	89.180	Cavia_aperea
ENSGAFG00000013094	cnot3a	76	74.937	ENSCPOG00000020741	CNOT3	85	89.180	Cavia_porcellus
ENSGAFG00000013094	cnot3a	68	89.180	ENSCCAG00000036290	CNOT3	79	89.180	Cebus_capucinus
ENSGAFG00000013094	cnot3a	76	74.177	ENSCATG00000030324	CNOT3	93	89.180	Cercocebus_atys
ENSGAFG00000013094	cnot3a	68	88.103	ENSCLAG00000003302	CNOT3	100	85.366	Chinchilla_lanigera
ENSGAFG00000013094	cnot3a	76	74.177	ENSCSAG00000001900	CNOT3	93	89.180	Chlorocebus_sabaeus
ENSGAFG00000013094	cnot3a	70	87.781	ENSCPBG00000011655	CNOT3	88	89.180	Chrysemys_picta_bellii
ENSGAFG00000013094	cnot3a	64	57.547	ENSCING00000000293	-	71	68.443	Ciona_intestinalis
ENSGAFG00000013094	cnot3a	68	87.781	ENSCANG00000013408	CNOT3	93	89.180	Colobus_angolensis_palliatus
ENSGAFG00000013094	cnot3a	76	89.508	ENSCGRG00001000855	Cnot3	85	89.508	Cricetulus_griseus_chok1gshd
ENSGAFG00000013094	cnot3a	100	85.049	ENSCSEG00000003574	cnot3a	100	85.466	Cynoglossus_semilaevis
ENSGAFG00000013094	cnot3a	100	58.470	ENSCSEG00000016892	cnot3b	70	80.392	Cynoglossus_semilaevis
ENSGAFG00000013094	cnot3a	100	92.810	ENSCVAG00000008168	cnot3a	100	92.810	Cyprinodon_variegatus
ENSGAFG00000013094	cnot3a	100	73.781	ENSDARG00000007135	cnot3a	100	71.895	Danio_rerio
ENSGAFG00000013094	cnot3a	57	62.597	ENSDARG00000019842	cnot3b	56	59.884	Danio_rerio
ENSGAFG00000013094	cnot3a	68	87.460	ENSDNOG00000045972	CNOT3	75	88.852	Dasypus_novemcinctus
ENSGAFG00000013094	cnot3a	68	89.180	ENSDORG00000008021	Cnot3	100	80.460	Dipodomys_ordii
ENSGAFG00000013094	cnot3a	52	100.000	ENSETEG00000006305	CNOT3	63	100.000	Echinops_telfairi
ENSGAFG00000013094	cnot3a	71	69.737	ENSEBUG00000010437	cnot3a	71	70.724	Eptatretus_burgeri
ENSGAFG00000013094	cnot3a	68	87.781	ENSEASG00005021591	CNOT3	75	89.180	Equus_asinus_asinus
ENSGAFG00000013094	cnot3a	68	87.781	ENSECAG00000023181	CNOT3	75	89.180	Equus_caballus
ENSGAFG00000013094	cnot3a	100	78.526	ENSELUG00000014743	cnot3a	55	80.435	Esox_lucius
ENSGAFG00000013094	cnot3a	100	68.017	ENSELUG00000000953	cnot3b	55	62.476	Esox_lucius
ENSGAFG00000013094	cnot3a	76	74.811	ENSFCAG00000014042	CNOT3	76	89.180	Felis_catus
ENSGAFG00000013094	cnot3a	100	92.572	ENSFHEG00000023166	cnot3a	96	99.573	Fundulus_heteroclitus
ENSGAFG00000013094	cnot3a	94	78.397	ENSGMOG00000005365	cnot3a	98	76.190	Gadus_morhua
ENSGAFG00000013094	cnot3a	94	80.679	ENSGACG00000011489	cnot3a	98	78.454	Gasterosteus_aculeatus
ENSGAFG00000013094	cnot3a	63	87.843	ENSGAGG00000012677	CNOT3	87	86.239	Gopherus_agassizii
ENSGAFG00000013094	cnot3a	76	74.177	ENSGGOG00000012996	CNOT3	79	89.180	Gorilla_gorilla
ENSGAFG00000013094	cnot3a	100	88.377	ENSHBUG00000005275	cnot3a	100	89.035	Haplochromis_burtoni
ENSGAFG00000013094	cnot3a	68	88.103	ENSHGLG00000008821	CNOT3	100	80.460	Heterocephalus_glaber_female
ENSGAFG00000013094	cnot3a	60	83.908	ENSHGLG00100006181	CNOT3	100	80.460	Heterocephalus_glaber_male
ENSGAFG00000013094	cnot3a	100	81.818	ENSHCOG00000020968	cnot3a	100	80.065	Hippocampus_comes
ENSGAFG00000013094	cnot3a	100	64.686	ENSIPUG00000009046	cnot3b	57	57.654	Ictalurus_punctatus
ENSGAFG00000013094	cnot3a	100	66.594	ENSIPUG00000000167	cnot3	62	94.872	Ictalurus_punctatus
ENSGAFG00000013094	cnot3a	68	89.180	ENSSTOG00000028248	CNOT3	93	89.180	Ictidomys_tridecemlineatus
ENSGAFG00000013094	cnot3a	68	89.508	ENSJJAG00000014594	Cnot3	100	80.460	Jaculus_jaculus
ENSGAFG00000013094	cnot3a	100	65.994	ENSKMAG00000018723	cnot3b	50	61.438	Kryptolebias_marmoratus
ENSGAFG00000013094	cnot3a	100	87.459	ENSKMAG00000004863	cnot3a	100	87.199	Kryptolebias_marmoratus
ENSGAFG00000013094	cnot3a	96	66.408	ENSLBEG00000018278	cnot3b	72	89.869	Labrus_bergylta
ENSGAFG00000013094	cnot3a	55	94.681	ENSLBEG00000017296	cnot3a	68	94.681	Labrus_bergylta
ENSGAFG00000013094	cnot3a	74	86.174	ENSLACG00000009742	CNOT3	94	87.541	Latimeria_chalumnae
ENSGAFG00000013094	cnot3a	55	94.611	ENSLOCG00000000005	cnot3b	80	90.850	Lepisosteus_oculatus
ENSGAFG00000013094	cnot3a	76	74.495	ENSLAFG00000022133	CNOT3	70	88.562	Loxodonta_africana
ENSGAFG00000013094	cnot3a	76	73.924	ENSMFAG00000040073	CNOT3	93	89.180	Macaca_fascicularis
ENSGAFG00000013094	cnot3a	60	92.437	ENSMMUG00000009698	CNOT3	100	96.078	Macaca_mulatta
ENSGAFG00000013094	cnot3a	76	74.177	ENSMNEG00000036750	CNOT3	93	89.180	Macaca_nemestrina
ENSGAFG00000013094	cnot3a	76	74.177	ENSMLEG00000036579	CNOT3	93	89.180	Mandrillus_leucophaeus
ENSGAFG00000013094	cnot3a	100	86.075	ENSMAMG00000019397	cnot3a	100	87.390	Mastacembelus_armatus
ENSGAFG00000013094	cnot3a	100	88.268	ENSMZEG00005016304	cnot3a	100	88.925	Maylandia_zebra
ENSGAFG00000013094	cnot3a	76	74.564	ENSMAUG00000014996	Cnot3	85	89.508	Mesocricetus_auratus
ENSGAFG00000013094	cnot3a	68	87.781	ENSMICG00000002370	CNOT3	75	89.180	Microcebus_murinus
ENSGAFG00000013094	cnot3a	100	84.598	ENSMMOG00000016446	cnot3a	100	83.828	Mola_mola
ENSGAFG00000013094	cnot3a	67	90.171	ENSMMOG00000013086	cnot3b	99	86.747	Mola_mola
ENSGAFG00000013094	cnot3a	60	89.180	ENSMODG00000004066	CNOT3	73	89.180	Monodelphis_domestica
ENSGAFG00000013094	cnot3a	100	86.123	ENSMALG00000009204	cnot3a	100	86.029	Monopterus_albus
ENSGAFG00000013094	cnot3a	59	86.486	ENSMALG00000004936	cnot3b	74	86.195	Monopterus_albus
ENSGAFG00000013094	cnot3a	68	88.103	MGP_CAROLIEiJ_G0029095	Cnot3	100	98.000	Mus_caroli
ENSGAFG00000013094	cnot3a	68	88.103	ENSMUSG00000035632	Cnot3	100	98.000	Mus_musculus
ENSGAFG00000013094	cnot3a	76	74.314	MGP_PahariEiJ_G0020964	Cnot3	100	98.000	Mus_pahari
ENSGAFG00000013094	cnot3a	68	88.103	MGP_SPRETEiJ_G0030148	Cnot3	100	98.000	Mus_spretus
ENSGAFG00000013094	cnot3a	68	88.103	ENSMPUG00000010352	CNOT3	75	89.180	Mustela_putorius_furo
ENSGAFG00000013094	cnot3a	68	89.180	ENSNGAG00000013266	Cnot3	72	89.180	Nannospalax_galili
ENSGAFG00000013094	cnot3a	87	77.616	ENSNBRG00000003336	cnot3b	95	89.823	Neolamprologus_brichardi
ENSGAFG00000013094	cnot3a	100	86.294	ENSNBRG00000002401	cnot3a	100	86.952	Neolamprologus_brichardi
ENSGAFG00000013094	cnot3a	76	74.680	ENSNLEG00000006272	CNOT3	67	91.566	Nomascus_leucogenys
ENSGAFG00000013094	cnot3a	68	89.180	ENSODEG00000000705	CNOT3	100	88.608	Octodon_degus
ENSGAFG00000013094	cnot3a	100	87.199	ENSONIG00000006568	cnot3a	100	87.842	Oreochromis_niloticus
ENSGAFG00000013094	cnot3a	76	74.684	ENSOCUG00000007691	CNOT3	85	89.180	Oryctolagus_cuniculus
ENSGAFG00000013094	cnot3a	60	57.220	ENSORLG00000005982	cnot3b	56	60.352	Oryzias_latipes
ENSGAFG00000013094	cnot3a	100	87.196	ENSORLG00000011174	cnot3a	100	86.865	Oryzias_latipes
ENSGAFG00000013094	cnot3a	100	65.875	ENSORLG00020005779	cnot3b	56	60.707	Oryzias_latipes_hni
ENSGAFG00000013094	cnot3a	100	86.454	ENSORLG00020008009	cnot3a	100	86.659	Oryzias_latipes_hni
ENSGAFG00000013094	cnot3a	100	66.164	ENSORLG00015019021	cnot3b	57	60.861	Oryzias_latipes_hsok
ENSGAFG00000013094	cnot3a	100	87.196	ENSORLG00015013729	cnot3a	100	86.755	Oryzias_latipes_hsok
ENSGAFG00000013094	cnot3a	100	87.872	ENSOMEG00000010309	cnot3a	91	96.457	Oryzias_melastigma
ENSGAFG00000013094	cnot3a	100	65.989	ENSOMEG00000015557	cnot3b	56	58.939	Oryzias_melastigma
ENSGAFG00000013094	cnot3a	76	74.684	ENSOGAG00000006945	CNOT3	75	89.180	Otolemur_garnettii
ENSGAFG00000013094	cnot3a	68	64.127	ENSOARG00000002981	CNOT3	64	91.444	Ovis_aries
ENSGAFG00000013094	cnot3a	76	74.177	ENSPPAG00000002748	CNOT3	79	89.180	Pan_paniscus
ENSGAFG00000013094	cnot3a	76	74.811	ENSPPRG00000011705	CNOT3	76	89.180	Panthera_pardus
ENSGAFG00000013094	cnot3a	63	87.622	ENSPTIG00000008781	CNOT3	97	87.908	Panthera_tigris_altaica
ENSGAFG00000013094	cnot3a	76	74.177	ENSPTRG00000046717	-	79	89.180	Pan_troglodytes
ENSGAFG00000013094	cnot3a	76	74.177	ENSPTRG00000011444	CNOT3	79	89.180	Pan_troglodytes
ENSGAFG00000013094	cnot3a	76	74.177	ENSPANG00000009375	CNOT3	93	89.180	Papio_anubis
ENSGAFG00000013094	cnot3a	100	65.401	ENSPKIG00000011733	CNOT3	78	57.115	Paramormyrops_kingsleyae
ENSGAFG00000013094	cnot3a	67	94.872	ENSPKIG00000015967	-	99	94.872	Paramormyrops_kingsleyae
ENSGAFG00000013094	cnot3a	76	74.065	ENSPEMG00000024185	Cnot3	75	89.508	Peromyscus_maniculatus_bairdii
ENSGAFG00000013094	cnot3a	68	88.852	ENSPCIG00000023018	CNOT3	96	88.852	Phascolarctos_cinereus
ENSGAFG00000013094	cnot3a	100	98.557	ENSPFOG00000008693	cnot3a	96	98.557	Poecilia_formosa
ENSGAFG00000013094	cnot3a	100	98.665	ENSPLAG00000013324	cnot3a	100	98.665	Poecilia_latipinna
ENSGAFG00000013094	cnot3a	100	98.335	ENSPMEG00000017718	cnot3a	100	98.335	Poecilia_mexicana
ENSGAFG00000013094	cnot3a	100	95.700	ENSPREG00000007592	cnot3a	100	95.700	Poecilia_reticulata
ENSGAFG00000013094	cnot3a	76	73.924	ENSPPYG00000010372	CNOT3	75	88.852	Pongo_abelii
ENSGAFG00000013094	cnot3a	56	93.220	ENSPCAG00000011999	CNOT3	56	93.220	Procavia_capensis
ENSGAFG00000013094	cnot3a	68	89.180	ENSPCOG00000017673	CNOT3	77	89.180	Propithecus_coquereli
ENSGAFG00000013094	cnot3a	76	74.430	ENSPVAG00000015564	CNOT3	70	88.525	Pteropus_vampyrus
ENSGAFG00000013094	cnot3a	100	88.268	ENSPNYG00000002282	cnot3a	100	88.925	Pundamilia_nyererei
ENSGAFG00000013094	cnot3a	100	74.486	ENSPNAG00000017679	cnot3a	64	93.061	Pygocentrus_nattereri
ENSGAFG00000013094	cnot3a	100	67.752	ENSPNAG00000027459	cnot3b	100	67.283	Pygocentrus_nattereri
ENSGAFG00000013094	cnot3a	68	88.103	ENSRNOG00000053234	Cnot3	75	89.508	Rattus_norvegicus
ENSGAFG00000013094	cnot3a	76	73.924	ENSRBIG00000031025	CNOT3	93	89.180	Rhinopithecus_bieti
ENSGAFG00000013094	cnot3a	76	74.177	ENSRROG00000003872	CNOT3	93	89.180	Rhinopithecus_roxellana
ENSGAFG00000013094	cnot3a	68	89.180	ENSSBOG00000030268	CNOT3	78	89.180	Saimiri_boliviensis_boliviensis
ENSGAFG00000013094	cnot3a	100	69.441	ENSSFOG00015019203	-	55	61.765	Scleropages_formosus
ENSGAFG00000013094	cnot3a	100	65.172	ENSSMAG00000016031	cnot3b	51	62.762	Scophthalmus_maximus
ENSGAFG00000013094	cnot3a	100	85.963	ENSSMAG00000013235	cnot3a	100	85.745	Scophthalmus_maximus
ENSGAFG00000013094	cnot3a	100	66.562	ENSSDUG00000003428	cnot3b	55	63.006	Seriola_dumerili
ENSGAFG00000013094	cnot3a	100	88.293	ENSSDUG00000008181	cnot3a	100	98.718	Seriola_dumerili
ENSGAFG00000013094	cnot3a	96	87.401	ENSSLDG00000014733	cnot3a	99	88.977	Seriola_lalandi_dorsalis
ENSGAFG00000013094	cnot3a	100	66.667	ENSSLDG00000014376	cnot3b	55	63.198	Seriola_lalandi_dorsalis
ENSGAFG00000013094	cnot3a	82	82.891	ENSSPUG00000008510	CNOT3	89	89.180	Sphenodon_punctatus
ENSGAFG00000013094	cnot3a	100	67.230	ENSSPAG00000001429	cnot3b	56	63.707	Stegastes_partitus
ENSGAFG00000013094	cnot3a	89	96.809	ENSSPAG00000003858	cnot3a	91	96.809	Stegastes_partitus
ENSGAFG00000013094	cnot3a	68	87.781	ENSSSCG00000003264	CNOT3	75	89.180	Sus_scrofa
ENSGAFG00000013094	cnot3a	100	85.447	ENSTRUG00000015732	cnot3a	100	85.777	Takifugu_rubripes
ENSGAFG00000013094	cnot3a	94	82.634	ENSTNIG00000008082	cnot3a	100	79.630	Tetraodon_nigroviridis
ENSGAFG00000013094	cnot3a	68	88.103	ENSUAMG00000005234	CNOT3	76	89.508	Ursus_americanus
ENSGAFG00000013094	cnot3a	60	88.129	ENSUMAG00000010934	CNOT3	89	92.857	Ursus_maritimus
ENSGAFG00000013094	cnot3a	76	74.307	ENSVVUG00000008239	CNOT3	74	89.180	Vulpes_vulpes
ENSGAFG00000013094	cnot3a	70	85.759	ENSXETG00000003166	cnot3	88	88.387	Xenopus_tropicalis
ENSGAFG00000013094	cnot3a	96	96.893	ENSXCOG00000019460	cnot3a	100	96.893	Xiphophorus_couchianus
ENSGAFG00000013094	cnot3a	100	98.443	ENSXMAG00000012273	cnot3a	100	98.443	Xiphophorus_maculatus