EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000013142 (Gene tree)
Gene ID: -
Gene Symbol: ddb1
Alias: zgc:63840
Full Name: damage-specific DNA binding protein 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 41802 bases
Position: chrNHOQ01000682.1:5650425-5692226
Accession: ZDB-GENE-040426-1272
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019464	CPSF_A	PF03178.15	7.2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019647	-	3514	-	ENSGAFP00000019464	1081 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013142's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013142's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013142	ddb1	99	91.146	ENSG00000167986	DDB1	100	96.575	Homo_sapiens
ENSGAFG00000013142	ddb1	99	98.322	ENSAPOG00000005036	ddb1	99	98.469	Acanthochromis_polyacanthus
ENSGAFG00000013142	ddb1	99	91.240	ENSAMEG00000016518	DDB1	94	91.240	Ailuropoda_melanoleuca
ENSGAFG00000013142	ddb1	91	98.367	ENSACIG00000020624	ddb1	99	98.367	Amphilophus_citrinellus
ENSGAFG00000013142	ddb1	99	98.229	ENSAOCG00000003066	ddb1	94	98.229	Amphiprion_ocellaris
ENSGAFG00000013142	ddb1	99	98.326	ENSAPEG00000000092	ddb1	99	98.326	Amphiprion_percula
ENSGAFG00000013142	ddb1	99	98.603	ENSATEG00000020571	ddb1	97	98.603	Anabas_testudineus
ENSGAFG00000013142	ddb1	98	89.896	ENSAPLG00000007174	DDB1	93	89.896	Anas_platyrhynchos
ENSGAFG00000013142	ddb1	99	90.308	ENSACAG00000017758	DDB1	94	90.308	Anolis_carolinensis
ENSGAFG00000013142	ddb1	99	91.146	ENSANAG00000021878	DDB1	94	91.146	Aotus_nancymaae
ENSGAFG00000013142	ddb1	99	97.950	ENSACLG00000012401	ddb1	99	97.539	Astatotilapia_calliptera
ENSGAFG00000013142	ddb1	57	30.464	ENSAMXG00000008485	cpsf1	52	30.464	Astyanax_mexicanus
ENSGAFG00000013142	ddb1	99	91.146	ENSBTAG00000021569	DDB1	88	91.146	Bos_taurus
ENSGAFG00000013142	ddb1	99	37.205	WBGene00010890	ddb-1	94	37.205	Caenorhabditis_elegans
ENSGAFG00000013142	ddb1	99	91.146	ENSCJAG00000019319	DDB1	94	91.146	Callithrix_jacchus
ENSGAFG00000013142	ddb1	99	91.434	ENSCAFG00000016264	DDB1	99	91.434	Canis_familiaris
ENSGAFG00000013142	ddb1	99	91.434	ENSCAFG00020012722	DDB1	99	91.434	Canis_lupus_dingo
ENSGAFG00000013142	ddb1	99	91.146	ENSCHIG00000014969	DDB1	94	91.146	Capra_hircus
ENSGAFG00000013142	ddb1	99	90.774	ENSTSYG00000008027	DDB1	94	90.774	Carlito_syrichta
ENSGAFG00000013142	ddb1	97	91.160	ENSCAPG00000010786	DDB1	94	91.160	Cavia_aperea
ENSGAFG00000013142	ddb1	99	91.146	ENSCPOG00000009956	DDB1	94	91.146	Cavia_porcellus
ENSGAFG00000013142	ddb1	99	91.146	ENSCCAG00000035883	DDB1	94	91.146	Cebus_capucinus
ENSGAFG00000013142	ddb1	99	89.177	ENSCATG00000044495	DDB1	94	89.177	Cercocebus_atys
ENSGAFG00000013142	ddb1	99	91.240	ENSCLAG00000004126	DDB1	94	91.240	Chinchilla_lanigera
ENSGAFG00000013142	ddb1	99	91.146	ENSCSAG00000006392	DDB1	94	91.146	Chlorocebus_sabaeus
ENSGAFG00000013142	ddb1	89	83.607	ENSCHOG00000011377	DDB1	86	83.607	Choloepus_hoffmanni
ENSGAFG00000013142	ddb1	99	90.680	ENSCPBG00000017728	DDB1	94	90.680	Chrysemys_picta_bellii
ENSGAFG00000013142	ddb1	99	61.460	ENSCING00000007437	-	94	61.460	Ciona_intestinalis
ENSGAFG00000013142	ddb1	93	60.707	ENSCSAVG00000004783	-	100	60.404	Ciona_savignyi
ENSGAFG00000013142	ddb1	99	91.146	ENSCANG00000019948	DDB1	94	91.146	Colobus_angolensis_palliatus
ENSGAFG00000013142	ddb1	99	91.240	ENSCGRG00001016599	Ddb1	98	90.299	Cricetulus_griseus_chok1gshd
ENSGAFG00000013142	ddb1	99	91.240	ENSCGRG00000013427	Ddb1	94	91.240	Cricetulus_griseus_crigri
ENSGAFG00000013142	ddb1	98	97.644	ENSCSEG00000012499	ddb1	99	95.951	Cynoglossus_semilaevis
ENSGAFG00000013142	ddb1	99	98.517	ENSCVAG00000019531	ddb1	99	98.517	Cyprinodon_variegatus
ENSGAFG00000013142	ddb1	99	91.791	ENSDARG00000074431	ddb1	94	91.791	Danio_rerio
ENSGAFG00000013142	ddb1	99	91.434	ENSDNOG00000014884	DDB1	97	91.434	Dasypus_novemcinctus
ENSGAFG00000013142	ddb1	82	95.455	ENSDORG00000000127	Ddb1	93	95.455	Dipodomys_ordii
ENSGAFG00000013142	ddb1	99	60.946	FBgn0260962	pic	94	60.946	Drosophila_melanogaster
ENSGAFG00000013142	ddb1	68	95.276	ENSETEG00000001053	-	64	95.276	Echinops_telfairi
ENSGAFG00000013142	ddb1	82	84.364	ENSEBUG00000014593	ddb1	97	84.364	Eptatretus_burgeri
ENSGAFG00000013142	ddb1	99	91.240	ENSEASG00005008184	DDB1	94	91.240	Equus_asinus_asinus
ENSGAFG00000013142	ddb1	99	91.240	ENSECAG00000012136	DDB1	94	91.240	Equus_caballus
ENSGAFG00000013142	ddb1	90	86.700	ENSEEUG00000003194	DDB1	85	86.700	Erinaceus_europaeus
ENSGAFG00000013142	ddb1	99	96.552	ENSELUG00000023868	ddb1	94	96.552	Esox_lucius
ENSGAFG00000013142	ddb1	99	91.240	ENSFCAG00000029716	DDB1	94	91.240	Felis_catus
ENSGAFG00000013142	ddb1	99	90.353	ENSFALG00000011981	DDB1	94	90.353	Ficedula_albicollis
ENSGAFG00000013142	ddb1	99	91.053	ENSFDAG00000005128	DDB1	94	91.053	Fukomys_damarensis
ENSGAFG00000013142	ddb1	89	98.913	ENSFHEG00000022133	ddb1	93	98.913	Fundulus_heteroclitus
ENSGAFG00000013142	ddb1	83	98.328	ENSGMOG00000019386	ddb1	94	98.328	Gadus_morhua
ENSGAFG00000013142	ddb1	99	90.587	ENSGALG00000042333	DDB1	94	90.587	Gallus_gallus
ENSGAFG00000013142	ddb1	99	97.944	ENSGACG00000017182	ddb1	98	97.944	Gasterosteus_aculeatus
ENSGAFG00000013142	ddb1	94	90.462	ENSGAGG00000014124	DDB1	94	90.462	Gopherus_agassizii
ENSGAFG00000013142	ddb1	99	91.146	ENSGGOG00000004052	DDB1	94	91.146	Gorilla_gorilla
ENSGAFG00000013142	ddb1	99	97.950	ENSHBUG00000008873	ddb1	94	97.950	Haplochromis_burtoni
ENSGAFG00000013142	ddb1	99	91.053	ENSHGLG00000018430	DDB1	94	91.053	Heterocephalus_glaber_female
ENSGAFG00000013142	ddb1	99	90.028	ENSHGLG00100014475	DDB1	94	90.028	Heterocephalus_glaber_male
ENSGAFG00000013142	ddb1	99	97.586	ENSHCOG00000018670	ddb1	99	97.586	Hippocampus_comes
ENSGAFG00000013142	ddb1	99	95.273	ENSIPUG00000005612	DDB1	98	95.273	Ictalurus_punctatus
ENSGAFG00000013142	ddb1	99	91.146	ENSSTOG00000007552	DDB1	94	91.146	Ictidomys_tridecemlineatus
ENSGAFG00000013142	ddb1	99	91.146	ENSJJAG00000017769	Ddb1	94	91.146	Jaculus_jaculus
ENSGAFG00000013142	ddb1	99	98.605	ENSKMAG00000002315	ddb1	100	98.605	Kryptolebias_marmoratus
ENSGAFG00000013142	ddb1	89	98.439	ENSLBEG00000017065	ddb1	99	98.439	Labrus_bergylta
ENSGAFG00000013142	ddb1	99	90.791	ENSLACG00000017611	DDB1	97	90.797	Latimeria_chalumnae
ENSGAFG00000013142	ddb1	91	86.977	ENSLOCG00000000012	ddb1	94	86.977	Lepisosteus_oculatus
ENSGAFG00000013142	ddb1	99	91.053	ENSLAFG00000011513	DDB1	94	91.053	Loxodonta_africana
ENSGAFG00000013142	ddb1	99	91.146	ENSMFAG00000042035	DDB1	94	91.146	Macaca_fascicularis
ENSGAFG00000013142	ddb1	99	91.146	ENSMMUG00000002691	DDB1	100	90.789	Macaca_mulatta
ENSGAFG00000013142	ddb1	57	30.065	ENSMMUG00000007380	CPSF1	56	30.065	Macaca_mulatta
ENSGAFG00000013142	ddb1	99	91.146	ENSMNEG00000031559	DDB1	94	91.146	Macaca_nemestrina
ENSGAFG00000013142	ddb1	99	91.146	ENSMLEG00000044136	DDB1	98	89.779	Mandrillus_leucophaeus
ENSGAFG00000013142	ddb1	99	98.509	ENSMAMG00000014372	ddb1	94	98.509	Mastacembelus_armatus
ENSGAFG00000013142	ddb1	99	97.856	ENSMZEG00005013835	ddb1	94	97.856	Maylandia_zebra
ENSGAFG00000013142	ddb1	93	90.239	ENSMGAG00000004990	DDB1	93	90.239	Meleagris_gallopavo
ENSGAFG00000013142	ddb1	99	91.240	ENSMAUG00000012926	Ddb1	94	91.240	Mesocricetus_auratus
ENSGAFG00000013142	ddb1	99	91.333	ENSMICG00000013703	DDB1	94	91.333	Microcebus_murinus
ENSGAFG00000013142	ddb1	99	91.146	ENSMOCG00000020499	Ddb1	94	91.146	Microtus_ochrogaster
ENSGAFG00000013142	ddb1	91	98.673	ENSMMOG00000001758	ddb1	99	98.673	Mola_mola
ENSGAFG00000013142	ddb1	99	82.947	ENSMODG00000020353	DDB1	93	82.947	Monodelphis_domestica
ENSGAFG00000013142	ddb1	99	98.322	ENSMALG00000014071	ddb1	94	98.322	Monopterus_albus
ENSGAFG00000013142	ddb1	99	91.240	MGP_CAROLIEiJ_G0022695	Ddb1	94	91.240	Mus_caroli
ENSGAFG00000013142	ddb1	99	91.333	ENSMUSG00000024740	Ddb1	94	91.333	Mus_musculus
ENSGAFG00000013142	ddb1	99	91.240	MGP_PahariEiJ_G0014189	Ddb1	94	91.240	Mus_pahari
ENSGAFG00000013142	ddb1	99	91.333	MGP_SPRETEiJ_G0023609	Ddb1	94	91.333	Mus_spretus
ENSGAFG00000013142	ddb1	99	88.071	ENSMPUG00000014200	DDB1	94	88.071	Mustela_putorius_furo
ENSGAFG00000013142	ddb1	99	91.333	ENSMLUG00000013232	DDB1	94	91.333	Myotis_lucifugus
ENSGAFG00000013142	ddb1	99	91.146	ENSNGAG00000009384	Ddb1	94	91.146	Nannospalax_galili
ENSGAFG00000013142	ddb1	99	98.043	ENSNBRG00000019581	ddb1	94	98.043	Neolamprologus_brichardi
ENSGAFG00000013142	ddb1	99	88.622	ENSNLEG00000002022	DDB1	94	88.622	Nomascus_leucogenys
ENSGAFG00000013142	ddb1	89	95.853	ENSMEUG00000001099	DDB1	87	95.853	Notamacropus_eugenii
ENSGAFG00000013142	ddb1	89	81.950	ENSOPRG00000008254	DDB1	85	81.950	Ochotona_princeps
ENSGAFG00000013142	ddb1	99	91.333	ENSODEG00000002419	DDB1	94	91.333	Octodon_degus
ENSGAFG00000013142	ddb1	99	98.043	ENSONIG00000005804	ddb1	94	98.043	Oreochromis_niloticus
ENSGAFG00000013142	ddb1	89	90.570	ENSOANG00000004897	DDB1	94	90.570	Ornithorhynchus_anatinus
ENSGAFG00000013142	ddb1	99	91.240	ENSOCUG00000001667	DDB1	94	91.240	Oryctolagus_cuniculus
ENSGAFG00000013142	ddb1	99	97.495	ENSORLG00000001399	ddb1	98	97.695	Oryzias_latipes
ENSGAFG00000013142	ddb1	99	97.403	ENSORLG00020001277	ddb1	96	97.403	Oryzias_latipes_hni
ENSGAFG00000013142	ddb1	99	97.495	ENSORLG00015002080	ddb1	99	97.495	Oryzias_latipes_hsok
ENSGAFG00000013142	ddb1	99	97.860	ENSOMEG00000006181	ddb1	97	97.860	Oryzias_melastigma
ENSGAFG00000013142	ddb1	99	91.333	ENSOGAG00000016103	DDB1	94	91.333	Otolemur_garnettii
ENSGAFG00000013142	ddb1	99	91.146	ENSOARG00000011716	DDB1	93	91.146	Ovis_aries
ENSGAFG00000013142	ddb1	99	91.146	ENSPPAG00000035343	DDB1	94	91.146	Pan_paniscus
ENSGAFG00000013142	ddb1	99	91.240	ENSPPRG00000013300	DDB1	94	91.240	Panthera_pardus
ENSGAFG00000013142	ddb1	97	91.255	ENSPTIG00000006909	DDB1	92	91.255	Panthera_tigris_altaica
ENSGAFG00000013142	ddb1	99	91.146	ENSPTRG00000003737	DDB1	94	91.146	Pan_troglodytes
ENSGAFG00000013142	ddb1	99	91.146	ENSPANG00000000242	DDB1	94	91.146	Papio_anubis
ENSGAFG00000013142	ddb1	99	95.721	ENSPKIG00000019213	ddb1	94	95.721	Paramormyrops_kingsleyae
ENSGAFG00000013142	ddb1	98	90.066	ENSPSIG00000013275	DDB1	94	90.066	Pelodiscus_sinensis
ENSGAFG00000013142	ddb1	91	98.265	ENSPMGG00000021179	ddb1	99	98.265	Periophthalmus_magnuspinnatus
ENSGAFG00000013142	ddb1	99	91.240	ENSPEMG00000012241	Ddb1	94	91.240	Peromyscus_maniculatus_bairdii
ENSGAFG00000013142	ddb1	94	86.935	ENSPMAG00000008479	ddb1	100	86.935	Petromyzon_marinus
ENSGAFG00000013142	ddb1	99	91.240	ENSPCIG00000002643	DDB1	94	91.240	Phascolarctos_cinereus
ENSGAFG00000013142	ddb1	99	99.813	ENSPFOG00000002768	ddb1	94	99.813	Poecilia_formosa
ENSGAFG00000013142	ddb1	99	99.814	ENSPLAG00000017227	ddb1	98	99.814	Poecilia_latipinna
ENSGAFG00000013142	ddb1	99	99.814	ENSPMEG00000011398	ddb1	98	99.814	Poecilia_mexicana
ENSGAFG00000013142	ddb1	99	99.814	ENSPREG00000004440	ddb1	97	99.814	Poecilia_reticulata
ENSGAFG00000013142	ddb1	99	87.453	ENSPPYG00000003193	DDB1	93	87.453	Pongo_abelii
ENSGAFG00000013142	ddb1	83	88.723	ENSPCAG00000011040	DDB1	79	88.723	Procavia_capensis
ENSGAFG00000013142	ddb1	99	90.884	ENSPCOG00000015176	DDB1	94	90.884	Propithecus_coquereli
ENSGAFG00000013142	ddb1	99	91.053	ENSPVAG00000003847	DDB1	94	91.053	Pteropus_vampyrus
ENSGAFG00000013142	ddb1	99	96.190	ENSPNAG00000006635	ddb1	97	96.190	Pygocentrus_nattereri
ENSGAFG00000013142	ddb1	99	91.333	ENSRNOG00000020715	Ddb1	94	91.333	Rattus_norvegicus
ENSGAFG00000013142	ddb1	99	91.146	ENSRBIG00000033611	DDB1	95	91.146	Rhinopithecus_bieti
ENSGAFG00000013142	ddb1	57	30.065	ENSRBIG00000044907	CPSF1	56	30.065	Rhinopithecus_bieti
ENSGAFG00000013142	ddb1	99	91.146	ENSRROG00000041407	DDB1	94	91.146	Rhinopithecus_roxellana
ENSGAFG00000013142	ddb1	57	30.065	ENSRROG00000044861	CPSF1	56	30.065	Rhinopithecus_roxellana
ENSGAFG00000013142	ddb1	99	91.240	ENSSBOG00000019775	DDB1	94	91.240	Saimiri_boliviensis_boliviensis
ENSGAFG00000013142	ddb1	93	88.734	ENSSHAG00000011600	DDB1	94	88.734	Sarcophilus_harrisii
ENSGAFG00000013142	ddb1	99	95.826	ENSSFOG00015011151	ddb1	97	95.826	Scleropages_formosus
ENSGAFG00000013142	ddb1	99	97.950	ENSSMAG00000009495	ddb1	94	97.950	Scophthalmus_maximus
ENSGAFG00000013142	ddb1	99	98.509	ENSSDUG00000004642	ddb1	94	98.509	Seriola_dumerili
ENSGAFG00000013142	ddb1	99	98.509	ENSSLDG00000015804	ddb1	94	98.509	Seriola_lalandi_dorsalis
ENSGAFG00000013142	ddb1	72	94.340	ENSSARG00000003290	-	71	94.340	Sorex_araneus
ENSGAFG00000013142	ddb1	99	90.587	ENSSPUG00000019338	DDB1	94	90.587	Sphenodon_punctatus
ENSGAFG00000013142	ddb1	99	98.510	ENSSPAG00000009888	ddb1	99	98.510	Stegastes_partitus
ENSGAFG00000013142	ddb1	99	90.833	ENSSSCG00000013094	DDB1	94	90.833	Sus_scrofa
ENSGAFG00000013142	ddb1	99	90.807	ENSTGUG00000006414	DDB1	94	90.807	Taeniopygia_guttata
ENSGAFG00000013142	ddb1	99	96.942	ENSTRUG00000016682	ddb1	99	96.942	Takifugu_rubripes
ENSGAFG00000013142	ddb1	86	91.658	ENSTNIG00000009565	ddb1	93	91.658	Tetraodon_nigroviridis
ENSGAFG00000013142	ddb1	91	84.835	ENSTTRG00000011055	DDB1	88	84.835	Tursiops_truncatus
ENSGAFG00000013142	ddb1	99	91.434	ENSUAMG00000017793	DDB1	93	91.434	Ursus_americanus
ENSGAFG00000013142	ddb1	99	91.434	ENSUMAG00000011788	DDB1	98	91.434	Ursus_maritimus
ENSGAFG00000013142	ddb1	89	86.349	ENSVPAG00000007963	DDB1	86	86.349	Vicugna_pacos
ENSGAFG00000013142	ddb1	99	91.240	ENSVVUG00000004987	DDB1	94	91.240	Vulpes_vulpes
ENSGAFG00000013142	ddb1	99	88.394	ENSXETG00000008820	ddb1	94	88.394	Xenopus_tropicalis
ENSGAFG00000013142	ddb1	91	99.796	ENSXCOG00000013956	ddb1	99	99.796	Xiphophorus_couchianus
ENSGAFG00000013142	ddb1	100	99.815	ENSXMAG00000000022	ddb1	100	99.815	Xiphophorus_maculatus