EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000013149 (Gene tree)
Gene ID: -
Gene Symbol: zmat4a
Alias: si:dkey-159k22.3|zmat4
Full Name: zinc finger%2C matrin-type 4a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 81456 bases
Position: chrNHOQ01002301.1:4516753-4598208
Accession: ZDB-GENE-081104-333
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019496	zf-met	PF12874.7	2.2e-32	1	4
ENSGAFP00000019496	zf-met	PF12874.7	2.2e-32	2	4
ENSGAFP00000019496	zf-met	PF12874.7	2.2e-32	3	4
ENSGAFP00000019496	zf-met	PF12874.7	2.2e-32	4	4
ENSGAFP00000019463	zf-met	PF12874.7	5.7e-32	1	4
ENSGAFP00000019463	zf-met	PF12874.7	5.7e-32	2	4
ENSGAFP00000019463	zf-met	PF12874.7	5.7e-32	3	4
ENSGAFP00000019463	zf-met	PF12874.7	5.7e-32	4	4
ENSGAFP00000019491	zf-met	PF12874.7	1.4e-24	1	3
ENSGAFP00000019491	zf-met	PF12874.7	1.4e-24	2	3
ENSGAFP00000019491	zf-met	PF12874.7	1.4e-24	3	3
ENSGAFP00000019471	zf-met	PF12874.7	2e-17	1	2
ENSGAFP00000019471	zf-met	PF12874.7	2e-17	2	2
ENSGAFP00000019496	zf-C2H2_jaz	PF12171.8	2e-24	1	2
ENSGAFP00000019496	zf-C2H2_jaz	PF12171.8	2e-24	2	2
ENSGAFP00000019463	zf-C2H2_jaz	PF12171.8	5.5e-24	1	2
ENSGAFP00000019463	zf-C2H2_jaz	PF12171.8	5.5e-24	2	2
ENSGAFP00000019491	zf-C2H2_jaz	PF12171.8	8.1e-17	1	1
ENSGAFP00000019471	zf-C2H2_jaz	PF12171.8	4.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019680	-	639	-	ENSGAFP00000019496	212 (aa)	-	-
ENSGAFT00000019646	-	4223	-	ENSGAFP00000019463	260 (aa)	-	-
ENSGAFT00000019674	-	1391	-	ENSGAFP00000019491	265 (aa)	-	-
ENSGAFT00000019654	-	1608	-	ENSGAFP00000019471	276 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013149's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013149's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000013149	zmat4a	97	74.545	ENSGAFG00000009398	zgc:171482	95	60.265
ENSGAFG00000013149	zmat4a	75	50.575	ENSGAFG00000007352	znf346	51	50.575

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013149	zmat4a	100	74.672	ENSG00000165061	ZMAT4	100	74.672	Homo_sapiens
ENSGAFG00000013149	zmat4a	92	75.258	ENSAPOG00000007448	zmat4a	98	75.258	Acanthochromis_polyacanthus
ENSGAFG00000013149	zmat4a	98	73.991	ENSAMEG00000002758	ZMAT4	99	74.888	Ailuropoda_melanoleuca
ENSGAFG00000013149	zmat4a	99	92.925	ENSACIG00000009080	zmat4a	100	92.925	Amphilophus_citrinellus
ENSGAFG00000013149	zmat4a	100	92.692	ENSAOCG00000004416	zmat4a	100	92.692	Amphiprion_ocellaris
ENSGAFG00000013149	zmat4a	100	92.308	ENSAPEG00000018565	zmat4a	100	92.308	Amphiprion_percula
ENSGAFG00000013149	zmat4a	99	90.541	ENSATEG00000012630	zmat4a	95	91.235	Anabas_testudineus
ENSGAFG00000013149	zmat4a	100	76.211	ENSAPLG00000006106	ZMAT4	100	77.293	Anas_platyrhynchos
ENSGAFG00000013149	zmat4a	89	76.733	ENSACAG00000005388	ZMAT4	97	76.733	Anolis_carolinensis
ENSGAFG00000013149	zmat4a	100	74.672	ENSANAG00000027926	ZMAT4	100	74.672	Aotus_nancymaae
ENSGAFG00000013149	zmat4a	100	90.000	ENSACLG00000005038	zmat4a	100	90.000	Astatotilapia_calliptera
ENSGAFG00000013149	zmat4a	99	85.909	ENSAMXG00000035337	zmat4a	100	87.727	Astyanax_mexicanus
ENSGAFG00000013149	zmat4a	100	73.362	ENSBTAG00000017420	ZMAT4	100	74.236	Bos_taurus
ENSGAFG00000013149	zmat4a	100	72.926	ENSCAFG00000005744	ZMAT4	100	74.236	Canis_familiaris
ENSGAFG00000013149	zmat4a	71	66.867	ENSCAFG00020002716	ZMAT4	96	68.293	Canis_lupus_dingo
ENSGAFG00000013149	zmat4a	100	73.362	ENSCHIG00000022017	ZMAT4	100	74.236	Capra_hircus
ENSGAFG00000013149	zmat4a	70	69.697	ENSTSYG00000031413	ZMAT4	100	70.909	Carlito_syrichta
ENSGAFG00000013149	zmat4a	100	73.362	ENSCAPG00000014401	ZMAT4	100	73.913	Cavia_aperea
ENSGAFG00000013149	zmat4a	100	73.362	ENSCPOG00000015224	ZMAT4	100	73.913	Cavia_porcellus
ENSGAFG00000013149	zmat4a	100	74.672	ENSCCAG00000027437	ZMAT4	100	74.672	Cebus_capucinus
ENSGAFG00000013149	zmat4a	100	74.672	ENSCATG00000044978	ZMAT4	100	74.672	Cercocebus_atys
ENSGAFG00000013149	zmat4a	100	73.362	ENSCLAG00000000923	ZMAT4	100	74.236	Chinchilla_lanigera
ENSGAFG00000013149	zmat4a	99	75.000	ENSCSAG00000015108	ZMAT4	100	75.000	Chlorocebus_sabaeus
ENSGAFG00000013149	zmat4a	100	61.842	ENSCHOG00000003755	ZMAT4	100	62.719	Choloepus_hoffmanni
ENSGAFG00000013149	zmat4a	69	71.918	ENSCPBG00000002781	ZMAT4	92	71.918	Chrysemys_picta_bellii
ENSGAFG00000013149	zmat4a	93	72.308	ENSCANG00000032136	ZMAT4	100	72.308	Colobus_angolensis_palliatus
ENSGAFG00000013149	zmat4a	100	73.362	ENSCGRG00001016583	Zmat4	100	74.348	Cricetulus_griseus_chok1gshd
ENSGAFG00000013149	zmat4a	100	73.362	ENSCGRG00000002696	Zmat4	100	74.348	Cricetulus_griseus_crigri
ENSGAFG00000013149	zmat4a	100	89.615	ENSCSEG00000013707	zmat4a	100	92.766	Cynoglossus_semilaevis
ENSGAFG00000013149	zmat4a	100	93.462	ENSCVAG00000000113	zmat4a	100	93.462	Cyprinodon_variegatus
ENSGAFG00000013149	zmat4a	99	76.000	ENSDARG00000061419	zmat4b	99	77.093	Danio_rerio
ENSGAFG00000013149	zmat4a	100	86.207	ENSDARG00000092987	zmat4a	99	96.552	Danio_rerio
ENSGAFG00000013149	zmat4a	99	73.214	ENSDNOG00000001045	ZMAT4	100	73.661	Dasypus_novemcinctus
ENSGAFG00000013149	zmat4a	100	73.362	ENSDORG00000009300	Zmat4	100	74.672	Dipodomys_ordii
ENSGAFG00000013149	zmat4a	67	72.785	ENSETEG00000010474	ZMAT4	81	73.418	Echinops_telfairi
ENSGAFG00000013149	zmat4a	100	72.926	ENSEASG00005010447	ZMAT4	100	73.799	Equus_asinus_asinus
ENSGAFG00000013149	zmat4a	100	73.362	ENSECAG00000021550	ZMAT4	100	74.236	Equus_caballus
ENSGAFG00000013149	zmat4a	99	62.946	ENSEEUG00000002565	ZMAT4	100	63.393	Erinaceus_europaeus
ENSGAFG00000013149	zmat4a	100	90.498	ENSELUG00000005097	zmat4a	100	89.286	Esox_lucius
ENSGAFG00000013149	zmat4a	100	73.799	ENSFCAG00000012775	ZMAT4	100	75.109	Felis_catus
ENSGAFG00000013149	zmat4a	98	77.626	ENSFALG00000006455	ZMAT4	100	77.489	Ficedula_albicollis
ENSGAFG00000013149	zmat4a	100	72.052	ENSFDAG00000015258	ZMAT4	97	72.926	Fukomys_damarensis
ENSGAFG00000013149	zmat4a	99	93.458	ENSFHEG00000022872	zmat4b	100	93.458	Fundulus_heteroclitus
ENSGAFG00000013149	zmat4a	99	86.937	ENSGMOG00000007950	zmat4a	100	90.090	Gadus_morhua
ENSGAFG00000013149	zmat4a	98	76.577	ENSGALG00000003470	ZMAT4	100	77.632	Gallus_gallus
ENSGAFG00000013149	zmat4a	99	90.090	ENSGACG00000005515	zmat4a	100	93.392	Gasterosteus_aculeatus
ENSGAFG00000013149	zmat4a	98	77.578	ENSGAGG00000004799	ZMAT4	100	79.476	Gopherus_agassizii
ENSGAFG00000013149	zmat4a	100	74.672	ENSGGOG00000006633	ZMAT4	100	74.672	Gorilla_gorilla
ENSGAFG00000013149	zmat4a	100	90.385	ENSHBUG00000012634	zmat4a	100	90.385	Haplochromis_burtoni
ENSGAFG00000013149	zmat4a	100	72.489	ENSHGLG00000003246	ZMAT4	100	73.799	Heterocephalus_glaber_female
ENSGAFG00000013149	zmat4a	67	71.519	ENSHGLG00100000081	ZMAT4	100	72.785	Heterocephalus_glaber_male
ENSGAFG00000013149	zmat4a	52	96.364	ENSHCOG00000006516	zmat4b	93	94.828	Hippocampus_comes
ENSGAFG00000013149	zmat4a	100	83.258	ENSIPUG00000022248	zmat4	100	81.250	Ictalurus_punctatus
ENSGAFG00000013149	zmat4a	100	72.926	ENSJJAG00000013484	Zmat4	100	74.236	Jaculus_jaculus
ENSGAFG00000013149	zmat4a	100	73.568	ENSLACG00000006206	-	99	74.348	Latimeria_chalumnae
ENSGAFG00000013149	zmat4a	58	54.478	ENSLACG00000005109	-	92	53.846	Latimeria_chalumnae
ENSGAFG00000013149	zmat4a	100	87.111	ENSLOCG00000015435	zmat4b	99	90.625	Lepisosteus_oculatus
ENSGAFG00000013149	zmat4a	99	74.667	ENSLAFG00000014753	ZMAT4	100	74.779	Loxodonta_africana
ENSGAFG00000013149	zmat4a	100	74.672	ENSMFAG00000043475	ZMAT4	100	74.672	Macaca_fascicularis
ENSGAFG00000013149	zmat4a	93	72.308	ENSMMUG00000000776	ZMAT4	100	72.308	Macaca_mulatta
ENSGAFG00000013149	zmat4a	100	74.672	ENSMNEG00000042102	ZMAT4	100	74.672	Macaca_nemestrina
ENSGAFG00000013149	zmat4a	100	74.672	ENSMLEG00000034448	ZMAT4	100	74.672	Mandrillus_leucophaeus
ENSGAFG00000013149	zmat4a	99	90.045	ENSMAMG00000019914	zmat4a	94	88.846	Mastacembelus_armatus
ENSGAFG00000013149	zmat4a	100	90.385	ENSMZEG00005004946	zmat4a	100	90.385	Maylandia_zebra
ENSGAFG00000013149	zmat4a	98	74.888	ENSMGAG00000002288	ZMAT4	99	74.026	Meleagris_gallopavo
ENSGAFG00000013149	zmat4a	84	70.256	ENSMICG00000047837	ZMAT4	100	71.282	Microcebus_murinus
ENSGAFG00000013149	zmat4a	100	73.362	ENSMOCG00000015996	Zmat4	100	73.913	Microtus_ochrogaster
ENSGAFG00000013149	zmat4a	100	90.385	ENSMMOG00000012619	zmat4a	97	90.385	Mola_mola
ENSGAFG00000013149	zmat4a	84	73.333	ENSMODG00000010499	ZMAT4	97	75.130	Monodelphis_domestica
ENSGAFG00000013149	zmat4a	100	90.385	ENSMALG00000015056	zmat4a	100	90.385	Monopterus_albus
ENSGAFG00000013149	zmat4a	100	73.362	MGP_CAROLIEiJ_G0030909	Zmat4	100	86.458	Mus_caroli
ENSGAFG00000013149	zmat4a	100	73.362	ENSMUSG00000037492	Zmat4	100	86.458	Mus_musculus
ENSGAFG00000013149	zmat4a	100	73.362	MGP_PahariEiJ_G0021380	Zmat4	100	86.458	Mus_pahari
ENSGAFG00000013149	zmat4a	100	73.362	MGP_SPRETEiJ_G0032028	Zmat4	100	86.458	Mus_spretus
ENSGAFG00000013149	zmat4a	99	73.778	ENSMPUG00000005832	ZMAT4	80	73.778	Mustela_putorius_furo
ENSGAFG00000013149	zmat4a	56	69.173	ENSMLUG00000014209	ZMAT4	100	69.925	Myotis_lucifugus
ENSGAFG00000013149	zmat4a	100	72.489	ENSNGAG00000015545	Zmat4	100	73.799	Nannospalax_galili
ENSGAFG00000013149	zmat4a	99	89.189	ENSNBRG00000011844	zmat4a	99	90.991	Neolamprologus_brichardi
ENSGAFG00000013149	zmat4a	100	74.672	ENSNLEG00000012564	ZMAT4	100	74.672	Nomascus_leucogenys
ENSGAFG00000013149	zmat4a	99	74.779	ENSMEUG00000000558	ZMAT4	100	74.779	Notamacropus_eugenii
ENSGAFG00000013149	zmat4a	100	73.799	ENSOPRG00000009257	ZMAT4	100	74.672	Ochotona_princeps
ENSGAFG00000013149	zmat4a	100	73.362	ENSODEG00000006439	ZMAT4	100	74.236	Octodon_degus
ENSGAFG00000013149	zmat4a	96	36.000	ENSONIG00000020374	-	50	37.398	Oreochromis_niloticus
ENSGAFG00000013149	zmat4a	82	86.022	ENSONIG00000016086	zmat4a	100	86.022	Oreochromis_niloticus
ENSGAFG00000013149	zmat4a	83	86.726	ENSOANG00000022431	ZMAT4	100	86.726	Ornithorhynchus_anatinus
ENSGAFG00000013149	zmat4a	100	73.799	ENSOCUG00000000977	ZMAT4	100	74.672	Oryctolagus_cuniculus
ENSGAFG00000013149	zmat4a	57	89.933	ENSORLG00000016169	zmat4b	98	81.119	Oryzias_latipes
ENSGAFG00000013149	zmat4a	100	90.114	ENSORLG00020019602	zmat4a	100	93.590	Oryzias_latipes_hni
ENSGAFG00000013149	zmat4a	100	90.114	ENSORLG00015009006	zmat4a	100	93.590	Oryzias_latipes_hsok
ENSGAFG00000013149	zmat4a	100	89.354	ENSOMEG00000003441	zmat4a	87	90.114	Oryzias_melastigma
ENSGAFG00000013149	zmat4a	99	72.768	ENSOGAG00000012558	ZMAT4	100	73.661	Otolemur_garnettii
ENSGAFG00000013149	zmat4a	99	73.778	ENSOARG00000002354	ZMAT4	85	73.778	Ovis_aries
ENSGAFG00000013149	zmat4a	99	75.111	ENSPPAG00000042573	ZMAT4	100	75.111	Pan_paniscus
ENSGAFG00000013149	zmat4a	100	72.926	ENSPPRG00000007023	ZMAT4	100	74.236	Panthera_pardus
ENSGAFG00000013149	zmat4a	100	72.926	ENSPTIG00000019738	ZMAT4	100	74.236	Panthera_tigris_altaica
ENSGAFG00000013149	zmat4a	100	74.672	ENSPTRG00000020191	ZMAT4	100	74.672	Pan_troglodytes
ENSGAFG00000013149	zmat4a	100	74.672	ENSPANG00000014196	ZMAT4	100	74.672	Papio_anubis
ENSGAFG00000013149	zmat4a	99	69.032	ENSPKIG00000021792	zmat4b	99	63.690	Paramormyrops_kingsleyae
ENSGAFG00000013149	zmat4a	100	84.444	ENSPKIG00000000048	zmat4a	100	83.077	Paramormyrops_kingsleyae
ENSGAFG00000013149	zmat4a	98	78.027	ENSPSIG00000004847	ZMAT4	100	79.913	Pelodiscus_sinensis
ENSGAFG00000013149	zmat4a	99	86.792	ENSPMGG00000001436	zmat4b	100	86.792	Periophthalmus_magnuspinnatus
ENSGAFG00000013149	zmat4a	97	53.394	ENSPMAG00000004582	zmat4a	97	54.185	Petromyzon_marinus
ENSGAFG00000013149	zmat4a	100	75.109	ENSPCIG00000028706	ZMAT4	95	74.742	Phascolarctos_cinereus
ENSGAFG00000013149	zmat4a	100	99.231	ENSPFOG00000006742	zmat4a	100	99.231	Poecilia_formosa
ENSGAFG00000013149	zmat4a	97	99.203	ENSPLAG00000019268	zmat4a	99	99.203	Poecilia_latipinna
ENSGAFG00000013149	zmat4a	100	99.231	ENSPMEG00000007870	zmat4a	100	99.231	Poecilia_mexicana
ENSGAFG00000013149	zmat4a	100	99.231	ENSPREG00000014914	zmat4a	100	99.231	Poecilia_reticulata
ENSGAFG00000013149	zmat4a	100	74.672	ENSPPYG00000018540	ZMAT4	100	74.672	Pongo_abelii
ENSGAFG00000013149	zmat4a	100	72.489	ENSPCAG00000004820	ZMAT4	100	73.043	Procavia_capensis
ENSGAFG00000013149	zmat4a	100	73.799	ENSPCOG00000007717	ZMAT4	100	74.672	Propithecus_coquereli
ENSGAFG00000013149	zmat4a	83	75.521	ENSPVAG00000011393	ZMAT4	84	76.042	Pteropus_vampyrus
ENSGAFG00000013149	zmat4a	100	89.231	ENSPNYG00000006173	zmat4a	92	89.231	Pundamilia_nyererei
ENSGAFG00000013149	zmat4a	100	72.687	ENSPNAG00000023764	zmat4b	100	72.687	Pygocentrus_nattereri
ENSGAFG00000013149	zmat4a	100	86.154	ENSPNAG00000009604	zmat4a	100	86.154	Pygocentrus_nattereri
ENSGAFG00000013149	zmat4a	100	73.043	ENSRNOG00000042690	Zmat4	100	74.026	Rattus_norvegicus
ENSGAFG00000013149	zmat4a	100	74.672	ENSRBIG00000031887	ZMAT4	100	74.672	Rhinopithecus_bieti
ENSGAFG00000013149	zmat4a	100	74.672	ENSRROG00000040877	ZMAT4	100	74.672	Rhinopithecus_roxellana
ENSGAFG00000013149	zmat4a	100	74.672	ENSSBOG00000017391	ZMAT4	100	74.672	Saimiri_boliviensis_boliviensis
ENSGAFG00000013149	zmat4a	76	65.000	ENSSHAG00000011847	ZMAT4	100	66.505	Sarcophilus_harrisii
ENSGAFG00000013149	zmat4a	99	90.566	ENSSFOG00015013158	zmat4	97	90.566	Scleropages_formosus
ENSGAFG00000013149	zmat4a	55	75.862	ENSSFOG00015015440	zmat4b	95	75.862	Scleropages_formosus
ENSGAFG00000013149	zmat4a	100	92.308	ENSSMAG00000017693	zmat4a	99	91.518	Scophthalmus_maximus
ENSGAFG00000013149	zmat4a	100	92.692	ENSSDUG00000005878	zmat4a	100	92.692	Seriola_dumerili
ENSGAFG00000013149	zmat4a	100	92.692	ENSSLDG00000012934	zmat4a	100	92.692	Seriola_lalandi_dorsalis
ENSGAFG00000013149	zmat4a	100	67.982	ENSSARG00000003679	ZMAT4	100	68.122	Sorex_araneus
ENSGAFG00000013149	zmat4a	99	90.991	ENSSPAG00000021408	zmat4a	94	91.633	Stegastes_partitus
ENSGAFG00000013149	zmat4a	100	73.362	ENSSSCG00000007010	ZMAT4	100	74.236	Sus_scrofa
ENSGAFG00000013149	zmat4a	99	75.771	ENSTGUG00000005159	ZMAT4	99	77.876	Taeniopygia_guttata
ENSGAFG00000013149	zmat4a	100	89.615	ENSTRUG00000005170	zmat4a	86	89.615	Takifugu_rubripes
ENSGAFG00000013149	zmat4a	99	72.247	ENSTNIG00000018863	zmat4b	99	74.336	Tetraodon_nigroviridis
ENSGAFG00000013149	zmat4a	100	62.445	ENSTBEG00000016172	ZMAT4	100	63.043	Tupaia_belangeri
ENSGAFG00000013149	zmat4a	100	68.122	ENSTTRG00000009606	ZMAT4	100	68.996	Tursiops_truncatus
ENSGAFG00000013149	zmat4a	99	73.778	ENSUMAG00000025578	ZMAT4	99	74.888	Ursus_maritimus
ENSGAFG00000013149	zmat4a	100	64.192	ENSVPAG00000009783	ZMAT4	100	64.629	Vicugna_pacos
ENSGAFG00000013149	zmat4a	100	73.362	ENSVVUG00000020407	ZMAT4	100	74.672	Vulpes_vulpes
ENSGAFG00000013149	zmat4a	52	72.414	ENSXCOG00000015061	zmat4b	100	64.748	Xiphophorus_couchianus
ENSGAFG00000013149	zmat4a	98	40.529	ENSXCOG00000010189	-	99	41.410	Xiphophorus_couchianus
ENSGAFG00000013149	zmat4a	100	99.615	ENSXMAG00000010461	zmat4a	100	99.615	Xiphophorus_maculatus