EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000013211 (Gene tree)
Gene ID: -
Gene Symbol: rbfox1l
Alias: Fox-1|ZFmu1A11s|a2bp1l|hm:zeh0082|zeh0082
Full Name: RNA binding fox-1 homolog 1%2C like
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 10189 bases
Position: chrNHOQ01001560.1:2191340-2201528
Accession: ZDB-GENE-040923-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019555	Fox-1_C	PF12414.8	6.2e-34	1	1
ENSGAFP00000019555	RRM_1	PF00076.22	8.7e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019738	-	1301	-	ENSGAFP00000019555	362 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013211's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013211's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000013211	rbfox1l	56	61.161	ENSGAFG00000008448	rbfox2	100	61.435
ENSGAFG00000013211	rbfox1l	86	59.748	ENSGAFG00000005025	rbfox3b	82	60.526

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013211	rbfox1l	94	88.596	ENSAPOG00000016304	rbfox1l	90	88.596	Acanthochromis_polyacanthus
ENSGAFG00000013211	rbfox1l	97	79.661	ENSACIG00000006441	rbfox1l	92	79.661	Amphilophus_citrinellus
ENSGAFG00000013211	rbfox1l	93	85.757	ENSAOCG00000020938	rbfox1l	99	85.757	Amphiprion_ocellaris
ENSGAFG00000013211	rbfox1l	97	89.548	ENSAPEG00000008232	rbfox1l	92	89.548	Amphiprion_percula
ENSGAFG00000013211	rbfox1l	97	83.616	ENSATEG00000022649	rbfox1l	92	83.616	Anabas_testudineus
ENSGAFG00000013211	rbfox1l	68	72.332	ENSACAG00000011931	-	91	72.727	Anolis_carolinensis
ENSGAFG00000013211	rbfox1l	99	86.944	ENSACLG00000021394	rbfox1l	92	87.853	Astatotilapia_calliptera
ENSGAFG00000013211	rbfox1l	97	83.754	ENSAMXG00000010470	rbfox1l	92	83.193	Astyanax_mexicanus
ENSGAFG00000013211	rbfox1l	69	69.960	ENSCPBG00000010944	-	74	66.906	Chrysemys_picta_bellii
ENSGAFG00000013211	rbfox1l	97	83.944	ENSCSEG00000018898	rbfox1l	92	83.380	Cynoglossus_semilaevis
ENSGAFG00000013211	rbfox1l	97	93.220	ENSCVAG00000007986	rbfox1l	92	93.220	Cyprinodon_variegatus
ENSGAFG00000013211	rbfox1l	97	80.672	ENSDARG00000021184	rbfox1l	92	81.513	Danio_rerio
ENSGAFG00000013211	rbfox1l	99	79.032	ENSELUG00000015077	rbfox1l	98	80.914	Esox_lucius
ENSGAFG00000013211	rbfox1l	75	97.561	ENSFHEG00000016557	rbfox1l	86	97.561	Fundulus_heteroclitus
ENSGAFG00000013211	rbfox1l	97	82.153	ENSGMOG00000005040	rbfox1l	92	82.153	Gadus_morhua
ENSGAFG00000013211	rbfox1l	97	86.441	ENSGACG00000010757	rbfox1l	92	86.441	Gasterosteus_aculeatus
ENSGAFG00000013211	rbfox1l	69	69.960	ENSGAGG00000012440	-	87	72.441	Gopherus_agassizii
ENSGAFG00000013211	rbfox1l	97	87.853	ENSHBUG00000013406	rbfox1l	92	87.853	Haplochromis_burtoni
ENSGAFG00000013211	rbfox1l	98	82.865	ENSHCOG00000020771	rbfox1l	96	83.989	Hippocampus_comes
ENSGAFG00000013211	rbfox1l	97	78.492	ENSIPUG00000000065	rbfox1l	99	79.330	Ictalurus_punctatus
ENSGAFG00000013211	rbfox1l	97	87.921	ENSKMAG00000005146	rbfox1l	92	88.764	Kryptolebias_marmoratus
ENSGAFG00000013211	rbfox1l	97	88.701	ENSLBEG00000017089	rbfox1l	92	88.701	Labrus_bergylta
ENSGAFG00000013211	rbfox1l	97	88.983	ENSMAMG00000019480	rbfox1l	92	88.983	Mastacembelus_armatus
ENSGAFG00000013211	rbfox1l	97	87.853	ENSMZEG00005016374	rbfox1l	92	87.853	Maylandia_zebra
ENSGAFG00000013211	rbfox1l	97	85.593	ENSMMOG00000016530	rbfox1l	92	85.593	Mola_mola
ENSGAFG00000013211	rbfox1l	97	84.181	ENSMALG00000009384	rbfox1l	92	84.181	Monopterus_albus
ENSGAFG00000013211	rbfox1l	97	86.723	ENSNBRG00000003346	rbfox1l	92	86.723	Neolamprologus_brichardi
ENSGAFG00000013211	rbfox1l	97	88.418	ENSONIG00000012754	rbfox1l	92	88.418	Oreochromis_niloticus
ENSGAFG00000013211	rbfox1l	98	87.430	ENSORLG00000011269	rbfox1l	94	87.709	Oryzias_latipes
ENSGAFG00000013211	rbfox1l	99	88.056	ENSORLG00020000162	rbfox1l	97	88.056	Oryzias_latipes_hni
ENSGAFG00000013211	rbfox1l	97	89.266	ENSORLG00015013464	rbfox1l	92	89.266	Oryzias_latipes_hsok
ENSGAFG00000013211	rbfox1l	97	88.701	ENSOMEG00000010584	rbfox1l	92	88.701	Oryzias_melastigma
ENSGAFG00000013211	rbfox1l	97	84.507	ENSPKIG00000012029	rbfox1l	92	84.507	Paramormyrops_kingsleyae
ENSGAFG00000013211	rbfox1l	97	80.168	ENSPMGG00000012082	rbfox1l	92	79.437	Periophthalmus_magnuspinnatus
ENSGAFG00000013211	rbfox1l	97	97.159	ENSPFOG00000009338	rbfox1l	92	97.159	Poecilia_formosa
ENSGAFG00000013211	rbfox1l	90	87.692	ENSPLAG00000012816	rbfox1l	99	87.692	Poecilia_latipinna
ENSGAFG00000013211	rbfox1l	97	92.898	ENSPMEG00000017597	rbfox1l	92	92.898	Poecilia_mexicana
ENSGAFG00000013211	rbfox1l	97	92.898	ENSPREG00000007940	rbfox1l	92	92.898	Poecilia_reticulata
ENSGAFG00000013211	rbfox1l	97	88.136	ENSPNYG00000002098	rbfox1l	92	88.136	Pundamilia_nyererei
ENSGAFG00000013211	rbfox1l	97	80.447	ENSPNAG00000001620	rbfox1l	92	82.402	Pygocentrus_nattereri
ENSGAFG00000013211	rbfox1l	100	77.838	ENSSFOG00015000675	rbfox1l	99	79.189	Scleropages_formosus
ENSGAFG00000013211	rbfox1l	99	85.515	ENSSMAG00000013090	rbfox1l	97	85.515	Scophthalmus_maximus
ENSGAFG00000013211	rbfox1l	97	83.889	ENSSDUG00000008705	rbfox1l	92	83.889	Seriola_dumerili
ENSGAFG00000013211	rbfox1l	97	84.401	ENSSLDG00000022256	rbfox1l	92	84.401	Seriola_lalandi_dorsalis
ENSGAFG00000013211	rbfox1l	97	88.983	ENSSPAG00000016620	rbfox1l	92	88.983	Stegastes_partitus
ENSGAFG00000013211	rbfox1l	93	81.232	ENSTRUG00000015905	rbfox1l	92	81.525	Takifugu_rubripes
ENSGAFG00000013211	rbfox1l	69	80.669	ENSTNIG00000008088	rbfox1l	100	83.643	Tetraodon_nigroviridis
ENSGAFG00000013211	rbfox1l	97	98.295	ENSXMAG00000023471	rbfox1l	92	98.295	Xiphophorus_maculatus