EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000013331 (Gene tree)
Gene ID: -
Gene Symbol: trmu
Alias: zgc:110555
Full Name: tRNA 5-methylaminomethyl-2-thiouridylate methyltransferase
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5441 bases
Position: chrNHOQ01002778.1:2187052-2192492
Accession: ZDB-GENE-050522-540
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019757	tRNA_Me_trans	PF03054.16	6.3e-135	1	1
ENSGAFP00000019760	tRNA_Me_trans	PF03054.16	1.4e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019942	-	1254	-	ENSGAFP00000019757	417 (aa)	-	-
ENSGAFT00000019945	-	300	-	ENSGAFP00000019760	99 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013331's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013331's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013331	trmu	99	77.551	ENSG00000100416	TRMU	99	77.551	Homo_sapiens
ENSGAFG00000013331	trmu	98	88.509	ENSAPOG00000014458	trmu	98	88.509	Acanthochromis_polyacanthus
ENSGAFG00000013331	trmu	95	73.367	ENSAMEG00000003319	TRMU	95	73.367	Ailuropoda_melanoleuca
ENSGAFG00000013331	trmu	98	87.561	ENSACIG00000002101	trmu	99	87.561	Amphilophus_citrinellus
ENSGAFG00000013331	trmu	98	89.242	ENSAOCG00000013155	trmu	98	89.242	Amphiprion_ocellaris
ENSGAFG00000013331	trmu	98	88.998	ENSAPEG00000013350	trmu	98	88.998	Amphiprion_percula
ENSGAFG00000013331	trmu	96	87.250	ENSATEG00000007814	trmu	97	87.250	Anabas_testudineus
ENSGAFG00000013331	trmu	92	74.151	ENSAPLG00000016380	TRMU	98	74.151	Anas_platyrhynchos
ENSGAFG00000013331	trmu	97	72.906	ENSACAG00000007720	TRMU	97	72.906	Anolis_carolinensis
ENSGAFG00000013331	trmu	96	72.750	ENSANAG00000038053	TRMU	95	72.750	Aotus_nancymaae
ENSGAFG00000013331	trmu	98	88.293	ENSACLG00000005395	trmu	99	88.293	Astatotilapia_calliptera
ENSGAFG00000013331	trmu	95	81.266	ENSAMXG00000005282	trmu	96	81.266	Astyanax_mexicanus
ENSGAFG00000013331	trmu	95	73.048	ENSBTAG00000005595	TRMU	95	73.048	Bos_taurus
ENSGAFG00000013331	trmu	92	50.000	WBGene00007114	mttu-1	98	40.874	Caenorhabditis_elegans
ENSGAFG00000013331	trmu	96	70.677	ENSCJAG00000000198	TRMU	95	70.677	Callithrix_jacchus
ENSGAFG00000013331	trmu	96	72.932	ENSCAFG00000000779	TRMU	94	72.932	Canis_familiaris
ENSGAFG00000013331	trmu	96	72.932	ENSCAFG00020009184	TRMU	94	72.932	Canis_lupus_dingo
ENSGAFG00000013331	trmu	95	72.544	ENSCHIG00000017074	TRMU	95	72.544	Capra_hircus
ENSGAFG00000013331	trmu	96	72.682	ENSTSYG00000003853	TRMU	95	72.682	Carlito_syrichta
ENSGAFG00000013331	trmu	93	68.227	ENSCAPG00000013034	TRMU	95	68.227	Cavia_aperea
ENSGAFG00000013331	trmu	96	72.388	ENSCPOG00000020780	TRMU	95	72.388	Cavia_porcellus
ENSGAFG00000013331	trmu	96	71.930	ENSCCAG00000021641	TRMU	95	71.930	Cebus_capucinus
ENSGAFG00000013331	trmu	96	72.180	ENSCATG00000032800	TRMU	95	72.180	Cercocebus_atys
ENSGAFG00000013331	trmu	96	72.932	ENSCLAG00000017269	TRMU	95	72.932	Chinchilla_lanigera
ENSGAFG00000013331	trmu	96	72.180	ENSCSAG00000005279	TRMU	95	72.180	Chlorocebus_sabaeus
ENSGAFG00000013331	trmu	89	73.387	ENSCPBG00000011621	TRMU	93	73.387	Chrysemys_picta_bellii
ENSGAFG00000013331	trmu	77	67.105	ENSCING00000019371	-	96	47.716	Ciona_intestinalis
ENSGAFG00000013331	trmu	96	71.679	ENSCANG00000041645	TRMU	95	71.679	Colobus_angolensis_palliatus
ENSGAFG00000013331	trmu	96	71.429	ENSCGRG00001001739	Trmu	95	71.429	Cricetulus_griseus_chok1gshd
ENSGAFG00000013331	trmu	83	80.488	ENSCGRG00000002781	Trmu	95	66.416	Cricetulus_griseus_crigri
ENSGAFG00000013331	trmu	98	80.929	ENSCSEG00000012382	trmu	98	80.929	Cynoglossus_semilaevis
ENSGAFG00000013331	trmu	98	92.421	ENSCVAG00000001366	trmu	98	92.421	Cyprinodon_variegatus
ENSGAFG00000013331	trmu	99	75.721	ENSDARG00000043734	trmu	100	75.721	Danio_rerio
ENSGAFG00000013331	trmu	61	58.915	ENSDNOG00000047245	-	91	58.915	Dasypus_novemcinctus
ENSGAFG00000013331	trmu	96	72.431	ENSDORG00000007455	Trmu	97	72.431	Dipodomys_ordii
ENSGAFG00000013331	trmu	93	43.523	FBgn0040337	CG3021	99	42.537	Drosophila_melanogaster
ENSGAFG00000013331	trmu	97	70.408	ENSETEG00000009394	-	66	74.576	Echinops_telfairi
ENSGAFG00000013331	trmu	93	56.489	ENSEBUG00000007454	trmu	100	55.043	Eptatretus_burgeri
ENSGAFG00000013331	trmu	96	73.183	ENSEASG00005021725	TRMU	95	73.183	Equus_asinus_asinus
ENSGAFG00000013331	trmu	96	73.183	ENSECAG00000000467	TRMU	95	73.183	Equus_caballus
ENSGAFG00000013331	trmu	71	53.401	ENSEEUG00000000074	-	77	81.481	Erinaceus_europaeus
ENSGAFG00000013331	trmu	98	80.779	ENSELUG00000009464	trmu	99	82.880	Esox_lucius
ENSGAFG00000013331	trmu	96	73.684	ENSFCAG00000006533	TRMU	95	73.684	Felis_catus
ENSGAFG00000013331	trmu	89	74.211	ENSFALG00000010035	TRMU	96	74.211	Ficedula_albicollis
ENSGAFG00000013331	trmu	90	70.856	ENSFDAG00000017472	TRMU	95	70.856	Fukomys_damarensis
ENSGAFG00000013331	trmu	98	91.687	ENSFHEG00000003162	trmu	98	93.188	Fundulus_heteroclitus
ENSGAFG00000013331	trmu	96	72.414	ENSGMOG00000001323	trmu	99	72.414	Gadus_morhua
ENSGAFG00000013331	trmu	95	75.434	ENSGALG00000031922	TRMU	95	75.434	Gallus_gallus
ENSGAFG00000013331	trmu	96	84.559	ENSGACG00000019024	trmu	96	84.559	Gasterosteus_aculeatus
ENSGAFG00000013331	trmu	99	78.571	ENSGGOG00000000203	TRMU	99	78.571	Gorilla_gorilla
ENSGAFG00000013331	trmu	98	87.805	ENSHBUG00000023421	trmu	99	87.805	Haplochromis_burtoni
ENSGAFG00000013331	trmu	96	70.647	ENSHGLG00000009278	TRMU	95	70.647	Heterocephalus_glaber_female
ENSGAFG00000013331	trmu	96	70.647	ENSHGLG00100018863	TRMU	95	70.647	Heterocephalus_glaber_male
ENSGAFG00000013331	trmu	98	85.366	ENSHCOG00000013459	trmu	99	85.366	Hippocampus_comes
ENSGAFG00000013331	trmu	96	80.798	ENSIPUG00000009785	trmu	99	80.798	Ictalurus_punctatus
ENSGAFG00000013331	trmu	96	72.431	ENSSTOG00000010993	TRMU	95	72.431	Ictidomys_tridecemlineatus
ENSGAFG00000013331	trmu	96	71.642	ENSJJAG00000000667	Trmu	96	71.642	Jaculus_jaculus
ENSGAFG00000013331	trmu	98	85.819	ENSKMAG00000008516	trmu	98	85.819	Kryptolebias_marmoratus
ENSGAFG00000013331	trmu	98	85.330	ENSLBEG00000018831	trmu	98	85.330	Labrus_bergylta
ENSGAFG00000013331	trmu	98	75.430	ENSLACG00000013713	TRMU	97	75.430	Latimeria_chalumnae
ENSGAFG00000013331	trmu	96	81.250	ENSLOCG00000016066	trmu	96	81.250	Lepisosteus_oculatus
ENSGAFG00000013331	trmu	83	79.268	ENSLAFG00000005129	TRMU	96	62.935	Loxodonta_africana
ENSGAFG00000013331	trmu	96	72.431	ENSMFAG00000039767	TRMU	95	72.431	Macaca_fascicularis
ENSGAFG00000013331	trmu	96	72.431	ENSMMUG00000000807	TRMU	95	72.431	Macaca_mulatta
ENSGAFG00000013331	trmu	96	72.431	ENSMNEG00000028164	TRMU	95	72.431	Macaca_nemestrina
ENSGAFG00000013331	trmu	96	72.180	ENSMLEG00000033884	TRMU	95	72.180	Mandrillus_leucophaeus
ENSGAFG00000013331	trmu	98	85.330	ENSMAMG00000004717	trmu	98	85.330	Mastacembelus_armatus
ENSGAFG00000013331	trmu	98	88.049	ENSMZEG00005015797	trmu	99	88.049	Maylandia_zebra
ENSGAFG00000013331	trmu	76	74.233	ENSMGAG00000007550	TRMU	95	74.233	Meleagris_gallopavo
ENSGAFG00000013331	trmu	96	71.429	ENSMAUG00000022282	Trmu	96	71.429	Mesocricetus_auratus
ENSGAFG00000013331	trmu	97	71.782	ENSMICG00000029046	TRMU	97	71.782	Microcebus_murinus
ENSGAFG00000013331	trmu	96	71.178	ENSMOCG00000014641	Trmu	96	71.178	Microtus_ochrogaster
ENSGAFG00000013331	trmu	99	83.894	ENSMMOG00000007229	trmu	100	83.894	Mola_mola
ENSGAFG00000013331	trmu	96	69.231	ENSMODG00000007433	TRMU	94	69.231	Monodelphis_domestica
ENSGAFG00000013331	trmu	98	84.597	ENSMALG00000007721	trmu	98	84.597	Monopterus_albus
ENSGAFG00000013331	trmu	100	75.758	MGP_CAROLIEiJ_G0020134	Trmu	100	75.758	Mus_caroli
ENSGAFG00000013331	trmu	100	75.758	ENSMUSG00000022386	Trmu	100	75.758	Mus_musculus
ENSGAFG00000013331	trmu	100	75.758	MGP_PahariEiJ_G0020139	Trmu	100	75.758	Mus_pahari
ENSGAFG00000013331	trmu	100	75.758	MGP_SPRETEiJ_G0021031	Trmu	100	75.758	Mus_spretus
ENSGAFG00000013331	trmu	96	72.431	ENSMPUG00000002523	TRMU	95	72.431	Mustela_putorius_furo
ENSGAFG00000013331	trmu	96	71.891	ENSNGAG00000005132	Trmu	97	71.891	Nannospalax_galili
ENSGAFG00000013331	trmu	98	88.293	ENSNBRG00000022690	trmu	99	89.000	Neolamprologus_brichardi
ENSGAFG00000013331	trmu	96	72.431	ENSNLEG00000015773	TRMU	95	72.431	Nomascus_leucogenys
ENSGAFG00000013331	trmu	81	71.250	ENSMEUG00000000216	TRMU	99	60.061	Notamacropus_eugenii
ENSGAFG00000013331	trmu	96	72.070	ENSODEG00000014745	TRMU	97	71.712	Octodon_degus
ENSGAFG00000013331	trmu	98	88.049	ENSONIG00000009821	trmu	99	88.049	Oreochromis_niloticus
ENSGAFG00000013331	trmu	92	67.700	ENSOANG00000001891	TRMU	98	67.700	Ornithorhynchus_anatinus
ENSGAFG00000013331	trmu	89	72.312	ENSOCUG00000003664	TRMU	93	71.026	Oryctolagus_cuniculus
ENSGAFG00000013331	trmu	97	83.744	ENSORLG00000019015	trmu	98	83.744	Oryzias_latipes
ENSGAFG00000013331	trmu	97	84.236	ENSORLG00020006830	trmu	98	84.236	Oryzias_latipes_hni
ENSGAFG00000013331	trmu	97	84.236	ENSORLG00015003907	trmu	98	84.236	Oryzias_latipes_hsok
ENSGAFG00000013331	trmu	58	85.062	ENSOMEG00000015541	trmu	87	85.062	Oryzias_melastigma
ENSGAFG00000013331	trmu	100	86.869	ENSOMEG00000015518	-	100	86.869	Oryzias_melastigma
ENSGAFG00000013331	trmu	96	71.679	ENSOGAG00000008096	TRMU	96	71.679	Otolemur_garnettii
ENSGAFG00000013331	trmu	83	80.488	ENSOARG00000019475	TRMU	93	69.474	Ovis_aries
ENSGAFG00000013331	trmu	99	78.571	ENSPPAG00000033944	TRMU	99	78.571	Pan_paniscus
ENSGAFG00000013331	trmu	96	73.684	ENSPPRG00000004197	TRMU	95	73.684	Panthera_pardus
ENSGAFG00000013331	trmu	93	67.742	ENSPTIG00000014122	TRMU	97	75.000	Panthera_tigris_altaica
ENSGAFG00000013331	trmu	99	78.571	ENSPTRG00000014510	TRMU	99	78.571	Pan_troglodytes
ENSGAFG00000013331	trmu	95	72.405	ENSPANG00000023074	TRMU	97	69.589	Papio_anubis
ENSGAFG00000013331	trmu	99	77.778	ENSPKIG00000002849	trmu	100	77.778	Paramormyrops_kingsleyae
ENSGAFG00000013331	trmu	87	73.626	ENSPSIG00000013020	TRMU	95	73.626	Pelodiscus_sinensis
ENSGAFG00000013331	trmu	99	83.455	ENSPMGG00000004083	trmu	99	83.455	Periophthalmus_magnuspinnatus
ENSGAFG00000013331	trmu	96	71.178	ENSPEMG00000014007	Trmu	96	71.178	Peromyscus_maniculatus_bairdii
ENSGAFG00000013331	trmu	96	66.750	ENSPCIG00000009923	TRMU	95	66.584	Phascolarctos_cinereus
ENSGAFG00000013331	trmu	96	92.481	ENSPFOG00000008197	trmu	89	92.481	Poecilia_formosa
ENSGAFG00000013331	trmu	98	95.844	ENSPLAG00000008414	trmu	98	95.844	Poecilia_latipinna
ENSGAFG00000013331	trmu	98	95.844	ENSPMEG00000004326	trmu	98	95.844	Poecilia_mexicana
ENSGAFG00000013331	trmu	98	96.088	ENSPREG00000007980	trmu	98	96.088	Poecilia_reticulata
ENSGAFG00000013331	trmu	96	72.932	ENSPPYG00000011949	TRMU	95	72.932	Pongo_abelii
ENSGAFG00000013331	trmu	89	65.229	ENSPCAG00000013462	TRMU	95	65.229	Procavia_capensis
ENSGAFG00000013331	trmu	96	71.178	ENSPCOG00000016539	TRMU	96	71.178	Propithecus_coquereli
ENSGAFG00000013331	trmu	83	81.707	ENSPVAG00000013202	TRMU	96	67.669	Pteropus_vampyrus
ENSGAFG00000013331	trmu	98	87.805	ENSPNYG00000005629	trmu	99	87.805	Pundamilia_nyererei
ENSGAFG00000013331	trmu	98	79.268	ENSPNAG00000006339	trmu	96	79.268	Pygocentrus_nattereri
ENSGAFG00000013331	trmu	96	70.927	ENSRNOG00000016465	Trmu	96	70.927	Rattus_norvegicus
ENSGAFG00000013331	trmu	96	71.429	ENSRBIG00000038973	TRMU	99	68.000	Rhinopithecus_bieti
ENSGAFG00000013331	trmu	96	71.679	ENSRROG00000004267	TRMU	99	68.000	Rhinopithecus_roxellana
ENSGAFG00000013331	trmu	84	44.318	YDL033C	SLM3	91	33.831	Saccharomyces_cerevisiae
ENSGAFG00000013331	trmu	96	72.180	ENSSBOG00000030184	TRMU	95	72.180	Saimiri_boliviensis_boliviensis
ENSGAFG00000013331	trmu	88	77.808	ENSSFOG00015020664	trmu	96	77.808	Scleropages_formosus
ENSGAFG00000013331	trmu	98	85.086	ENSSMAG00000019450	trmu	98	85.086	Scophthalmus_maximus
ENSGAFG00000013331	trmu	98	88.020	ENSSDUG00000011913	trmu	98	88.020	Seriola_dumerili
ENSGAFG00000013331	trmu	98	87.775	ENSSLDG00000011684	trmu	98	87.775	Seriola_lalandi_dorsalis
ENSGAFG00000013331	trmu	95	63.038	ENSSPUG00000017123	TRMU	93	63.038	Sphenodon_punctatus
ENSGAFG00000013331	trmu	98	85.819	ENSSPAG00000021875	trmu	98	85.819	Stegastes_partitus
ENSGAFG00000013331	trmu	96	71.393	ENSSSCG00000000007	TRMU	95	71.393	Sus_scrofa
ENSGAFG00000013331	trmu	89	75.871	ENSTGUG00000003663	-	100	75.871	Taeniopygia_guttata
ENSGAFG00000013331	trmu	93	83.871	ENSTRUG00000003403	-	94	83.871	Takifugu_rubripes
ENSGAFG00000013331	trmu	96	86.070	ENSTRUG00000001231	trmu	97	86.070	Takifugu_rubripes
ENSGAFG00000013331	trmu	99	83.571	ENSTNIG00000010484	trmu	99	83.571	Tetraodon_nigroviridis
ENSGAFG00000013331	trmu	55	83.333	ENSTBEG00000011276	-	77	56.667	Tupaia_belangeri
ENSGAFG00000013331	trmu	96	73.183	ENSTTRG00000004160	TRMU	95	73.183	Tursiops_truncatus
ENSGAFG00000013331	trmu	83	81.707	ENSUAMG00000024825	TRMU	97	74.914	Ursus_americanus
ENSGAFG00000013331	trmu	94	61.168	ENSUMAG00000019079	TRMU	97	74.319	Ursus_maritimus
ENSGAFG00000013331	trmu	53	62.557	ENSVPAG00000000685	-	100	62.557	Vicugna_pacos
ENSGAFG00000013331	trmu	96	71.930	ENSVVUG00000024963	TRMU	95	71.930	Vulpes_vulpes
ENSGAFG00000013331	trmu	98	74.453	ENSXETG00000023304	trmu	96	74.453	Xenopus_tropicalis
ENSGAFG00000013331	trmu	98	94.903	ENSXCOG00000015105	trmu	98	94.903	Xiphophorus_couchianus
ENSGAFG00000013331	trmu	98	97.555	ENSXMAG00000006697	trmu	98	97.555	Xiphophorus_maculatus