EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000013366 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4347 bases
Position: chrNHOQ01000797.1:4358-8704
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000019766	zf-C2H2	PF00096.26	2e-18	1	4
ENSGAFP00000019766	zf-C2H2	PF00096.26	2e-18	2	4
ENSGAFP00000019766	zf-C2H2	PF00096.26	2e-18	3	4
ENSGAFP00000019766	zf-C2H2	PF00096.26	2e-18	4	4
ENSGAFP00000019766	zf-met	PF12874.7	0.00016	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000019951	-	2476	-	ENSGAFP00000019766	308 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013366's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013366's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000013366	-	88	50.000	ENSGAFG00000012054	-	94	50.000
ENSGAFG00000013366	-	51	51.852	ENSGAFG00000021131	-	89	51.852
ENSGAFG00000013366	-	54	44.355	ENSGAFG00000012934	-	96	44.355
ENSGAFG00000013366	-	51	43.103	ENSGAFG00000014369	-	98	47.059
ENSGAFG00000013366	-	67	47.126	ENSGAFG00000011999	-	98	44.954
ENSGAFG00000013366	-	99	40.230	ENSGAFG00000011998	-	96	40.230
ENSGAFG00000013366	-	53	42.857	ENSGAFG00000000266	-	90	42.857
ENSGAFG00000013366	-	73	54.206	ENSGAFG00000021132	-	73	54.206
ENSGAFG00000013366	-	81	47.899	ENSGAFG00000019035	-	73	47.899
ENSGAFG00000013366	-	70	50.000	ENSGAFG00000012004	-	79	50.000
ENSGAFG00000013366	-	99	47.273	ENSGAFG00000008226	-	99	47.273
ENSGAFG00000013366	-	67	48.193	ENSGAFG00000016595	-	94	48.193
ENSGAFG00000013366	-	67	46.667	ENSGAFG00000011940	-	85	46.667
ENSGAFG00000013366	-	67	47.664	ENSGAFG00000011944	-	84	47.664
ENSGAFG00000013366	-	99	37.008	ENSGAFG00000012545	-	96	37.008
ENSGAFG00000013366	-	61	43.750	ENSGAFG00000019233	prdm5	80	43.750
ENSGAFG00000013366	-	69	39.286	ENSGAFG00000013053	-	66	39.286
ENSGAFG00000013366	-	67	54.651	ENSGAFG00000012035	-	95	49.515
ENSGAFG00000013366	-	99	49.524	ENSGAFG00000008231	-	99	49.524
ENSGAFG00000013366	-	99	39.362	ENSGAFG00000020507	-	98	39.362
ENSGAFG00000013366	-	68	48.148	ENSGAFG00000011884	-	96	50.926
ENSGAFG00000013366	-	87	43.636	ENSGAFG00000007110	-	99	43.636
ENSGAFG00000013366	-	98	51.250	ENSGAFG00000018422	-	95	51.250
ENSGAFG00000013366	-	93	48.571	ENSGAFG00000007104	-	98	48.571
ENSGAFG00000013366	-	99	47.222	ENSGAFG00000008204	-	96	47.222
ENSGAFG00000013366	-	52	50.000	ENSGAFG00000014563	-	66	50.000
ENSGAFG00000013366	-	60	53.704	ENSGAFG00000011924	-	78	53.704
ENSGAFG00000013366	-	69	50.000	ENSGAFG00000012069	-	98	50.000
ENSGAFG00000013366	-	69	47.115	ENSGAFG00000011938	-	83	47.115
ENSGAFG00000013366	-	50	49.074	ENSGAFG00000001402	-	61	49.074
ENSGAFG00000013366	-	53	48.148	ENSGAFG00000016093	-	72	48.148
ENSGAFG00000013366	-	99	56.579	ENSGAFG00000017066	-	99	49.524
ENSGAFG00000013366	-	54	42.308	ENSGAFG00000014188	-	96	42.308
ENSGAFG00000013366	-	55	48.571	ENSGAFG00000019072	-	95	44.186
ENSGAFG00000013366	-	51	43.810	ENSGAFG00000014097	-	71	43.810
ENSGAFG00000013366	-	72	43.750	ENSGAFG00000011906	-	78	43.750
ENSGAFG00000013366	-	99	47.619	ENSGAFG00000016976	-	100	48.148
ENSGAFG00000013366	-	99	49.505	ENSGAFG00000013934	-	99	49.541
ENSGAFG00000013366	-	79	50.588	ENSGAFG00000011326	-	98	50.588
ENSGAFG00000013366	-	99	47.222	ENSGAFG00000008274	-	98	47.222
ENSGAFG00000013366	-	99	49.020	ENSGAFG00000005337	-	98	45.000
ENSGAFG00000013366	-	99	45.455	ENSGAFG00000020501	-	98	45.455
ENSGAFG00000013366	-	58	58.621	ENSGAFG00000020505	-	58	42.553
ENSGAFG00000013366	-	75	46.429	ENSGAFG00000013116	-	81	46.429
ENSGAFG00000013366	-	66	48.148	ENSGAFG00000021143	-	92	48.148
ENSGAFG00000013366	-	60	44.444	ENSGAFG00000018063	GFI1	70	44.444
ENSGAFG00000013366	-	99	31.098	ENSGAFG00000000549	-	96	31.098
ENSGAFG00000013366	-	87	39.286	ENSGAFG00000018663	-	94	31.136
ENSGAFG00000013366	-	57	47.222	ENSGAFG00000014413	-	90	47.222
ENSGAFG00000013366	-	100	49.541	ENSGAFG00000010983	-	97	49.541
ENSGAFG00000013366	-	77	41.905	ENSGAFG00000011290	-	75	41.905
ENSGAFG00000013366	-	73	51.429	ENSGAFG00000007098	-	99	51.429
ENSGAFG00000013366	-	70	42.308	ENSGAFG00000013408	-	91	42.308

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013366	-	62	38.356	ENSAPOG00000010645	-	86	34.158	Acanthochromis_polyacanthus
ENSGAFG00000013366	-	99	44.340	ENSATEG00000007658	-	96	44.340	Anabas_testudineus
ENSGAFG00000013366	-	51	50.588	ENSAMXG00000013492	-	98	48.077	Astyanax_mexicanus
ENSGAFG00000013366	-	60	51.282	ENSCVAG00000016924	-	71	51.282	Cyprinodon_variegatus
ENSGAFG00000013366	-	98	31.642	ENSCVAG00000011712	-	93	31.642	Cyprinodon_variegatus
ENSGAFG00000013366	-	62	53.191	ENSCVAG00000018383	-	95	53.191	Cyprinodon_variegatus
ENSGAFG00000013366	-	99	47.619	ENSELUG00000022942	-	94	47.619	Esox_lucius
ENSGAFG00000013366	-	99	45.946	ENSELUG00000000281	-	93	45.946	Esox_lucius
ENSGAFG00000013366	-	55	47.368	ENSHBUG00000007316	-	91	47.368	Haplochromis_burtoni
ENSGAFG00000013366	-	99	42.453	ENSHCOG00000001870	-	98	42.453	Hippocampus_comes
ENSGAFG00000013366	-	97	46.729	ENSHCOG00000014797	-	97	46.729	Hippocampus_comes
ENSGAFG00000013366	-	53	47.222	ENSHCOG00000014792	-	64	47.222	Hippocampus_comes
ENSGAFG00000013366	-	97	46.789	ENSHCOG00000014999	-	98	46.789	Hippocampus_comes
ENSGAFG00000013366	-	99	40.000	ENSHCOG00000008133	-	97	40.000	Hippocampus_comes
ENSGAFG00000013366	-	99	49.541	ENSHCOG00000019006	-	99	49.541	Hippocampus_comes
ENSGAFG00000013366	-	98	31.230	ENSHCOG00000014994	-	82	31.230	Hippocampus_comes
ENSGAFG00000013366	-	98	44.144	ENSHCOG00000001242	-	99	44.144	Hippocampus_comes
ENSGAFG00000013366	-	100	47.959	ENSHCOG00000020976	-	100	47.959	Hippocampus_comes
ENSGAFG00000013366	-	98	42.353	ENSIPUG00000020760	-	96	30.094	Ictalurus_punctatus
ENSGAFG00000013366	-	99	36.813	ENSKMAG00000000556	-	99	40.741	Kryptolebias_marmoratus
ENSGAFG00000013366	-	98	33.117	ENSLBEG00000008733	-	97	33.333	Labrus_bergylta
ENSGAFG00000013366	-	50	55.072	ENSLBEG00000022059	-	88	55.072	Labrus_bergylta
ENSGAFG00000013366	-	51	53.846	ENSONIG00000011529	-	98	53.846	Oreochromis_niloticus
ENSGAFG00000013366	-	67	44.545	ENSORLG00000000557	-	99	44.545	Oryzias_latipes
ENSGAFG00000013366	-	67	45.872	ENSORLG00000001749	-	91	47.126	Oryzias_latipes
ENSGAFG00000013366	-	67	51.579	ENSORLG00000028456	-	95	51.579	Oryzias_latipes
ENSGAFG00000013366	-	90	49.074	ENSORLG00000026432	-	99	49.074	Oryzias_latipes
ENSGAFG00000013366	-	67	46.296	ENSORLG00000028433	-	98	46.296	Oryzias_latipes
ENSGAFG00000013366	-	52	43.519	ENSORLG00000023744	-	93	43.519	Oryzias_latipes
ENSGAFG00000013366	-	67	46.729	ENSORLG00000027303	-	97	46.729	Oryzias_latipes
ENSGAFG00000013366	-	70	46.296	ENSORLG00000023806	-	98	46.296	Oryzias_latipes
ENSGAFG00000013366	-	74	49.515	ENSORLG00000023809	-	99	49.515	Oryzias_latipes
ENSGAFG00000013366	-	50	47.222	ENSORLG00000000191	-	89	47.222	Oryzias_latipes
ENSGAFG00000013366	-	80	47.222	ENSORLG00000028261	-	70	47.222	Oryzias_latipes
ENSGAFG00000013366	-	50	44.444	ENSORLG00000029994	-	81	44.444	Oryzias_latipes
ENSGAFG00000013366	-	53	45.714	ENSORLG00000027974	-	73	45.714	Oryzias_latipes
ENSGAFG00000013366	-	99	53.333	ENSORLG00000025200	-	90	53.333	Oryzias_latipes
ENSGAFG00000013366	-	69	46.296	ENSORLG00000027575	-	95	46.296	Oryzias_latipes
ENSGAFG00000013366	-	67	46.296	ENSORLG00000029172	-	82	46.296	Oryzias_latipes
ENSGAFG00000013366	-	67	48.148	ENSORLG00000000247	-	92	48.148	Oryzias_latipes
ENSGAFG00000013366	-	74	47.273	ENSORLG00020000246	-	91	47.273	Oryzias_latipes_hni
ENSGAFG00000013366	-	67	44.144	ENSORLG00020008346	-	96	44.144	Oryzias_latipes_hni
ENSGAFG00000013366	-	63	46.296	ENSORLG00020021857	-	73	46.296	Oryzias_latipes_hni
ENSGAFG00000013366	-	60	46.364	ENSORLG00020009419	-	99	46.296	Oryzias_latipes_hni
ENSGAFG00000013366	-	67	42.056	ENSORLG00020007967	-	80	42.056	Oryzias_latipes_hni
ENSGAFG00000013366	-	99	45.283	ENSORLG00020021196	-	90	44.231	Oryzias_latipes_hni
ENSGAFG00000013366	-	67	44.444	ENSORLG00020004313	-	71	44.444	Oryzias_latipes_hni
ENSGAFG00000013366	-	59	50.000	ENSORLG00020010880	-	92	50.000	Oryzias_latipes_hni
ENSGAFG00000013366	-	99	53.333	ENSORLG00020008240	-	90	53.333	Oryzias_latipes_hni
ENSGAFG00000013366	-	75	47.222	ENSORLG00020000264	-	76	47.222	Oryzias_latipes_hni
ENSGAFG00000013366	-	54	41.667	ENSORLG00020004353	-	99	41.667	Oryzias_latipes_hni
ENSGAFG00000013366	-	99	33.528	ENSORLG00020000639	-	100	33.138	Oryzias_latipes_hni
ENSGAFG00000013366	-	74	45.714	ENSORLG00015007132	-	88	45.714	Oryzias_latipes_hsok
ENSGAFG00000013366	-	83	43.519	ENSORLG00015011758	-	98	43.519	Oryzias_latipes_hsok
ENSGAFG00000013366	-	67	44.681	ENSORLG00015011153	-	97	44.681	Oryzias_latipes_hsok
ENSGAFG00000013366	-	60	47.222	ENSORLG00015012062	-	95	47.222	Oryzias_latipes_hsok
ENSGAFG00000013366	-	72	43.902	ENSORLG00015012208	-	99	43.902	Oryzias_latipes_hsok
ENSGAFG00000013366	-	99	43.810	ENSORLG00015017068	-	99	43.810	Oryzias_latipes_hsok
ENSGAFG00000013366	-	99	44.037	ENSORLG00015019853	-	95	44.037	Oryzias_latipes_hsok
ENSGAFG00000013366	-	50	40.164	ENSORLG00015012084	-	84	40.164	Oryzias_latipes_hsok
ENSGAFG00000013366	-	72	46.296	ENSORLG00015012158	-	99	46.296	Oryzias_latipes_hsok
ENSGAFG00000013366	-	77	47.222	ENSORLG00015008013	-	96	47.222	Oryzias_latipes_hsok
ENSGAFG00000013366	-	97	46.296	ENSOMEG00000015435	-	69	46.296	Oryzias_melastigma
ENSGAFG00000013366	-	81	43.519	ENSOMEG00000009377	-	96	43.519	Oryzias_melastigma
ENSGAFG00000013366	-	60	45.714	ENSOMEG00000003577	-	96	45.714	Oryzias_melastigma
ENSGAFG00000013366	-	52	43.810	ENSOMEG00000021399	-	52	43.810	Oryzias_melastigma
ENSGAFG00000013366	-	58	45.455	ENSOMEG00000007495	-	91	45.455	Oryzias_melastigma
ENSGAFG00000013366	-	67	44.118	ENSOMEG00000011664	-	79	44.118	Oryzias_melastigma
ENSGAFG00000013366	-	64	42.593	ENSOMEG00000010744	-	89	42.593	Oryzias_melastigma
ENSGAFG00000013366	-	51	43.519	ENSOMEG00000012614	-	55	43.519	Oryzias_melastigma
ENSGAFG00000013366	-	99	46.739	ENSOMEG00000015891	-	100	46.739	Oryzias_melastigma
ENSGAFG00000013366	-	67	44.706	ENSOMEG00000021556	-	82	44.706	Oryzias_melastigma
ENSGAFG00000013366	-	99	44.828	ENSOMEG00000010941	-	99	44.828	Oryzias_melastigma
ENSGAFG00000013366	-	96	50.476	ENSOMEG00000004087	-	99	50.476	Oryzias_melastigma
ENSGAFG00000013366	-	77	45.794	ENSOMEG00000013842	-	92	45.794	Oryzias_melastigma
ENSGAFG00000013366	-	74	43.548	ENSOMEG00000012403	-	90	41.758	Oryzias_melastigma
ENSGAFG00000013366	-	67	46.552	ENSOMEG00000015147	-	68	46.552	Oryzias_melastigma
ENSGAFG00000013366	-	68	50.476	ENSOMEG00000021518	-	94	50.476	Oryzias_melastigma
ENSGAFG00000013366	-	99	46.296	ENSOMEG00000013894	-	98	46.296	Oryzias_melastigma
ENSGAFG00000013366	-	99	40.230	ENSPFOG00000024254	-	96	40.230	Poecilia_formosa
ENSGAFG00000013366	-	100	32.934	ENSPFOG00000008666	-	100	42.553	Poecilia_formosa
ENSGAFG00000013366	-	100	86.544	ENSPFOG00000023439	-	100	86.544	Poecilia_formosa
ENSGAFG00000013366	-	88	47.664	ENSPFOG00000022634	-	100	47.664	Poecilia_formosa
ENSGAFG00000013366	-	65	32.051	ENSPLAG00000002691	-	99	31.890	Poecilia_latipinna
ENSGAFG00000013366	-	100	92.532	ENSPLAG00000023077	-	100	92.532	Poecilia_latipinna
ENSGAFG00000013366	-	99	48.148	ENSPMEG00000013952	-	100	48.148	Poecilia_mexicana
ENSGAFG00000013366	-	98	36.076	ENSPREG00000002615	-	95	36.076	Poecilia_reticulata
ENSGAFG00000013366	-	52	47.115	ENSPNYG00000005202	-	96	51.000	Pundamilia_nyererei
ENSGAFG00000013366	-	98	33.535	ENSSDUG00000019911	-	69	60.000	Seriola_dumerili
ENSGAFG00000013366	-	51	46.296	ENSSDUG00000022914	-	81	46.296	Seriola_dumerili
ENSGAFG00000013366	-	51	45.833	ENSSLDG00000018033	-	92	45.833	Seriola_lalandi_dorsalis