EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000013498 (Gene tree)
Gene ID: -
Gene Symbol: smarcad1a
Alias: smarcad1|wu:fi25c01|zgc:113183
Full Name: SWI/SNF-related%2C matrix-associated actin-dependent regulator of chromatin%2C subfamily a%2C containing DEAD/H box 1 a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10957 bases
Position: chrNHOQ01002573.1:1951441-1962397
Accession: ZDB-GENE-050522-499
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000020011	ResIII	PF04851.15	9e-07	1	1
ENSGAFP00000019974	ResIII	PF04851.15	9.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000020141	-	3906	-	ENSGAFP00000019956	1069 (aa)	-	-
ENSGAFT00000020159	-	3852	-	ENSGAFP00000019974	1051 (aa)	-	-
ENSGAFT00000020197	-	3756	-	ENSGAFP00000020011	1019 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013498's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013498's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013498	smarcad1a	100	47.178	ENSG00000163104	SMARCAD1	99	66.835	Homo_sapiens
ENSGAFG00000013498	smarcad1a	100	70.417	ENSAPOG00000011446	smarcad1a	100	70.417	Acanthochromis_polyacanthus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSAMEG00000005844	SMARCAD1	90	66.667	Ailuropoda_melanoleuca
ENSGAFG00000013498	smarcad1a	68	85.294	ENSACIG00000018326	smarcad1a	89	84.360	Amphilophus_citrinellus
ENSGAFG00000013498	smarcad1a	100	69.982	ENSAOCG00000019762	smarcad1a	100	70.290	Amphiprion_ocellaris
ENSGAFG00000013498	smarcad1a	100	70.199	ENSAPEG00000003889	smarcad1a	100	70.182	Amphiprion_percula
ENSGAFG00000013498	smarcad1a	95	65.366	ENSATEG00000015608	smarcad1a	99	69.113	Anabas_testudineus
ENSGAFG00000013498	smarcad1a	80	67.035	ENSAPLG00000004630	SMARCAD1	89	63.722	Anas_platyrhynchos
ENSGAFG00000013498	smarcad1a	60	65.300	ENSACAG00000013554	SMARCAD1	62	65.300	Anolis_carolinensis
ENSGAFG00000013498	smarcad1a	60	66.509	ENSANAG00000020488	SMARCAD1	90	66.457	Aotus_nancymaae
ENSGAFG00000013498	smarcad1a	100	66.819	ENSACLG00000017063	smarcad1a	100	68.091	Astatotilapia_calliptera
ENSGAFG00000013498	smarcad1a	67	73.408	ENSAMXG00000019130	smarcad1b	90	58.488	Astyanax_mexicanus
ENSGAFG00000013498	smarcad1a	60	73.927	ENSAMXG00000015470	smarcad1a	88	73.927	Astyanax_mexicanus
ENSGAFG00000013498	smarcad1a	60	66.457	ENSBTAG00000017061	SMARCAD1	90	66.457	Bos_taurus
ENSGAFG00000013498	smarcad1a	58	42.114	WBGene00010845	M03C11.8	62	42.283	Caenorhabditis_elegans
ENSGAFG00000013498	smarcad1a	60	66.667	ENSCJAG00000006778	SMARCAD1	90	66.667	Callithrix_jacchus
ENSGAFG00000013498	smarcad1a	60	66.509	ENSCAFG00000010026	SMARCAD1	90	66.509	Canis_familiaris
ENSGAFG00000013498	smarcad1a	60	66.509	ENSCAFG00020003994	SMARCAD1	86	66.509	Canis_lupus_dingo
ENSGAFG00000013498	smarcad1a	60	66.667	ENSCHIG00000012905	SMARCAD1	90	66.667	Capra_hircus
ENSGAFG00000013498	smarcad1a	100	46.950	ENSTSYG00000002706	SMARCAD1	90	66.509	Carlito_syrichta
ENSGAFG00000013498	smarcad1a	77	56.364	ENSCAPG00000016744	SMARCAD1	78	61.986	Cavia_aperea
ENSGAFG00000013498	smarcad1a	60	66.509	ENSCPOG00000011398	SMARCAD1	90	66.509	Cavia_porcellus
ENSGAFG00000013498	smarcad1a	60	66.825	ENSCCAG00000022264	SMARCAD1	99	67.003	Cebus_capucinus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSCATG00000035663	SMARCAD1	90	67.012	Cercocebus_atys
ENSGAFG00000013498	smarcad1a	60	66.667	ENSCSAG00000004186	SMARCAD1	88	66.667	Chlorocebus_sabaeus
ENSGAFG00000013498	smarcad1a	100	46.602	ENSCPBG00000013203	SMARCAD1	62	66.562	Chrysemys_picta_bellii
ENSGAFG00000013498	smarcad1a	61	49.538	ENSCING00000001688	-	97	49.538	Ciona_intestinalis
ENSGAFG00000013498	smarcad1a	100	45.004	ENSCANG00000003556	SMARCAD1	99	66.835	Colobus_angolensis_palliatus
ENSGAFG00000013498	smarcad1a	60	66.351	ENSCGRG00001015056	Smarcad1	90	66.351	Cricetulus_griseus_chok1gshd
ENSGAFG00000013498	smarcad1a	60	66.351	ENSCGRG00000014087	Smarcad1	90	66.351	Cricetulus_griseus_crigri
ENSGAFG00000013498	smarcad1a	100	64.669	ENSCSEG00000017903	smarcad1a	100	64.969	Cynoglossus_semilaevis
ENSGAFG00000013498	smarcad1a	100	64.247	ENSCSEG00000014419	-	100	64.405	Cynoglossus_semilaevis
ENSGAFG00000013498	smarcad1a	60	73.408	ENSDARG00000073721	smarcad1b	66	73.408	Danio_rerio
ENSGAFG00000013498	smarcad1a	89	75.955	ENSDARG00000014041	smarcad1a	100	53.444	Danio_rerio
ENSGAFG00000013498	smarcad1a	60	66.667	ENSDNOG00000000806	-	90	66.667	Dasypus_novemcinctus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSDORG00000012331	Smarcad1	62	66.667	Dipodomys_ordii
ENSGAFG00000013498	smarcad1a	63	44.313	FBgn0032157	Etl1	78	44.362	Drosophila_melanogaster
ENSGAFG00000013498	smarcad1a	58	47.974	ENSEBUG00000003969	smarcad1a	90	48.966	Eptatretus_burgeri
ENSGAFG00000013498	smarcad1a	60	66.667	ENSEASG00005012382	SMARCAD1	90	66.667	Equus_asinus_asinus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSECAG00000011562	SMARCAD1	90	66.667	Equus_caballus
ENSGAFG00000013498	smarcad1a	100	61.028	ENSELUG00000018535	smarcad1a	69	74.678	Esox_lucius
ENSGAFG00000013498	smarcad1a	67	73.214	ENSELUG00000019154	smarcad1b	72	73.214	Esox_lucius
ENSGAFG00000013498	smarcad1a	60	66.825	ENSFCAG00000003958	SMARCAD1	99	67.003	Felis_catus
ENSGAFG00000013498	smarcad1a	60	67.666	ENSFALG00000006089	SMARCAD1	62	67.666	Ficedula_albicollis
ENSGAFG00000013498	smarcad1a	100	47.210	ENSFDAG00000017027	SMARCAD1	90	66.667	Fukomys_damarensis
ENSGAFG00000013498	smarcad1a	100	77.310	ENSFHEG00000012778	smarcad1a	100	78.082	Fundulus_heteroclitus
ENSGAFG00000013498	smarcad1a	77	76.596	ENSGMOG00000018995	smarcad1a	95	76.748	Gadus_morhua
ENSGAFG00000013498	smarcad1a	82	54.472	ENSGALG00000037339	SMARCAD1	95	53.547	Gallus_gallus
ENSGAFG00000013498	smarcad1a	78	77.994	ENSGACG00000007327	smarcad1a	95	78.947	Gasterosteus_aculeatus
ENSGAFG00000013498	smarcad1a	60	66.562	ENSGAGG00000008582	SMARCAD1	62	66.562	Gopherus_agassizii
ENSGAFG00000013498	smarcad1a	60	66.667	ENSGGOG00000023001	SMARCAD1	90	66.667	Gorilla_gorilla
ENSGAFG00000013498	smarcad1a	63	79.315	ENSHBUG00000011042	smarcad1a	100	67.727	Haplochromis_burtoni
ENSGAFG00000013498	smarcad1a	100	47.048	ENSHGLG00000005070	SMARCAD1	90	66.667	Heterocephalus_glaber_female
ENSGAFG00000013498	smarcad1a	100	47.048	ENSHGLG00100006812	SMARCAD1	90	66.667	Heterocephalus_glaber_male
ENSGAFG00000013498	smarcad1a	100	58.752	ENSHCOG00000007848	smarcad1a	100	58.681	Hippocampus_comes
ENSGAFG00000013498	smarcad1a	69	72.134	ENSIPUG00000022817	smarcad1b	87	72.134	Ictalurus_punctatus
ENSGAFG00000013498	smarcad1a	60	74.522	ENSIPUG00000000242	smarcad1a	95	59.601	Ictalurus_punctatus
ENSGAFG00000013498	smarcad1a	60	66.351	ENSSTOG00000001227	SMARCAD1	90	66.351	Ictidomys_tridecemlineatus
ENSGAFG00000013498	smarcad1a	60	66.193	ENSJJAG00000022342	Smarcad1	62	66.193	Jaculus_jaculus
ENSGAFG00000013498	smarcad1a	59	88.455	ENSKMAG00000021351	smarcad1a	99	70.997	Kryptolebias_marmoratus
ENSGAFG00000013498	smarcad1a	63	78.684	ENSLBEG00000008088	smarcad1a	99	65.639	Labrus_bergylta
ENSGAFG00000013498	smarcad1a	82	76.274	ENSLOCG00000012909	smarcad1a	90	76.274	Lepisosteus_oculatus
ENSGAFG00000013498	smarcad1a	60	65.245	ENSLAFG00000000040	SMARCAD1	90	65.245	Loxodonta_africana
ENSGAFG00000013498	smarcad1a	60	66.667	ENSMFAG00000042606	SMARCAD1	90	66.667	Macaca_fascicularis
ENSGAFG00000013498	smarcad1a	60	66.667	ENSMMUG00000022242	SMARCAD1	86	66.667	Macaca_mulatta
ENSGAFG00000013498	smarcad1a	60	66.667	ENSMNEG00000038117	SMARCAD1	99	66.835	Macaca_nemestrina
ENSGAFG00000013498	smarcad1a	60	66.667	ENSMLEG00000038333	SMARCAD1	99	66.835	Mandrillus_leucophaeus
ENSGAFG00000013498	smarcad1a	69	76.350	ENSMAMG00000000933	smarcad1a	100	69.419	Mastacembelus_armatus
ENSGAFG00000013498	smarcad1a	100	66.728	ENSMZEG00005005203	smarcad1a	100	67.185	Maylandia_zebra
ENSGAFG00000013498	smarcad1a	86	64.409	ENSMGAG00000005577	SMARCAD1	79	64.409	Meleagris_gallopavo
ENSGAFG00000013498	smarcad1a	60	66.509	ENSMAUG00000008417	Smarcad1	90	66.509	Mesocricetus_auratus
ENSGAFG00000013498	smarcad1a	60	66.299	ENSMICG00000009746	SMARCAD1	90	66.299	Microcebus_murinus
ENSGAFG00000013498	smarcad1a	60	66.509	ENSMOCG00000017142	Smarcad1	90	66.509	Microtus_ochrogaster
ENSGAFG00000013498	smarcad1a	66	84.395	ENSMMOG00000000275	smarcad1a	95	84.395	Mola_mola
ENSGAFG00000013498	smarcad1a	82	66.351	ENSMODG00000019268	SMARCAD1	74	66.351	Monodelphis_domestica
ENSGAFG00000013498	smarcad1a	88	51.765	MGP_CAROLIEiJ_G0028458	-	59	66.193	Mus_caroli
ENSGAFG00000013498	smarcad1a	100	46.305	ENSMUSG00000029920	Smarcad1	90	66.193	Mus_musculus
ENSGAFG00000013498	smarcad1a	100	46.305	MGP_PahariEiJ_G0022198	Smarcad1	90	66.193	Mus_pahari
ENSGAFG00000013498	smarcad1a	100	46.037	MGP_SPRETEiJ_G0029462	Smarcad1	90	66.193	Mus_spretus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSMPUG00000002111	SMARCAD1	90	66.667	Mustela_putorius_furo
ENSGAFG00000013498	smarcad1a	60	66.457	ENSMLUG00000000425	SMARCAD1	90	66.457	Myotis_lucifugus
ENSGAFG00000013498	smarcad1a	60	66.193	ENSNGAG00000000810	Smarcad1	62	66.193	Nannospalax_galili
ENSGAFG00000013498	smarcad1a	61	78.863	ENSNBRG00000012749	smarcad1a	97	71.656	Neolamprologus_brichardi
ENSGAFG00000013498	smarcad1a	100	46.726	ENSNLEG00000014225	SMARCAD1	99	66.835	Nomascus_leucogenys
ENSGAFG00000013498	smarcad1a	60	66.509	ENSODEG00000004334	SMARCAD1	90	66.509	Octodon_degus
ENSGAFG00000013498	smarcad1a	84	83.956	ENSONIG00000015059	smarcad1a	100	63.808	Oreochromis_niloticus
ENSGAFG00000013498	smarcad1a	66	67.244	ENSOANG00000013764	SMARCAD1	87	67.244	Ornithorhynchus_anatinus
ENSGAFG00000013498	smarcad1a	60	66.509	ENSOCUG00000017283	SMARCAD1	90	66.509	Oryctolagus_cuniculus
ENSGAFG00000013498	smarcad1a	100	65.423	ENSORLG00000004869	smarcad1a	100	65.395	Oryzias_latipes
ENSGAFG00000013498	smarcad1a	100	65.758	ENSORLG00020020569	smarcad1a	100	65.486	Oryzias_latipes_hni
ENSGAFG00000013498	smarcad1a	100	65.608	ENSORLG00015009045	smarcad1a	100	65.458	Oryzias_latipes_hsok
ENSGAFG00000013498	smarcad1a	99	65.455	ENSOMEG00000023032	smarcad1a	100	65.023	Oryzias_melastigma
ENSGAFG00000013498	smarcad1a	60	65.827	ENSOGAG00000011444	SMARCAD1	62	65.827	Otolemur_garnettii
ENSGAFG00000013498	smarcad1a	60	66.667	ENSOARG00000017851	SMARCAD1	90	66.667	Ovis_aries
ENSGAFG00000013498	smarcad1a	60	66.667	ENSPPAG00000035715	SMARCAD1	90	66.667	Pan_paniscus
ENSGAFG00000013498	smarcad1a	60	66.825	ENSPPRG00000024756	SMARCAD1	99	67.003	Panthera_pardus
ENSGAFG00000013498	smarcad1a	60	66.772	ENSPTIG00000017868	SMARCAD1	90	66.772	Panthera_tigris_altaica
ENSGAFG00000013498	smarcad1a	60	66.667	ENSPTRG00000023126	SMARCAD1	99	66.835	Pan_troglodytes
ENSGAFG00000013498	smarcad1a	100	46.120	ENSPANG00000019757	SMARCAD1	89	66.254	Papio_anubis
ENSGAFG00000013498	smarcad1a	60	67.508	ENSPSIG00000010255	SMARCAD1	61	67.508	Pelodiscus_sinensis
ENSGAFG00000013498	smarcad1a	60	78.254	ENSPMGG00000010735	smarcad1a	89	78.254	Periophthalmus_magnuspinnatus
ENSGAFG00000013498	smarcad1a	60	57.595	ENSPEMG00000001854	Smarcad1	89	57.595	Peromyscus_maniculatus_bairdii
ENSGAFG00000013498	smarcad1a	82	58.529	ENSPMAG00000003516	smarcad1a	89	58.529	Petromyzon_marinus
ENSGAFG00000013498	smarcad1a	64	66.983	ENSPCIG00000008137	SMARCAD1	83	67.047	Phascolarctos_cinereus
ENSGAFG00000013498	smarcad1a	100	89.936	ENSPFOG00000019116	smarcad1a	100	89.478	Poecilia_formosa
ENSGAFG00000013498	smarcad1a	100	89.936	ENSPLAG00000000108	smarcad1a	100	89.936	Poecilia_latipinna
ENSGAFG00000013498	smarcad1a	100	89.936	ENSPMEG00000009155	smarcad1a	100	89.570	Poecilia_mexicana
ENSGAFG00000013498	smarcad1a	100	90.009	ENSPREG00000018185	smarcad1a	100	90.009	Poecilia_reticulata
ENSGAFG00000013498	smarcad1a	100	47.043	ENSPPYG00000014935	SMARCAD1	90	66.299	Pongo_abelii
ENSGAFG00000013498	smarcad1a	82	65.769	ENSPVAG00000001760	SMARCAD1	90	65.769	Pteropus_vampyrus
ENSGAFG00000013498	smarcad1a	62	78.035	ENSPNYG00000010087	smarcad1a	97	71.499	Pundamilia_nyererei
ENSGAFG00000013498	smarcad1a	71	74.045	ENSPNAG00000010099	smarcad1b	82	74.045	Pygocentrus_nattereri
ENSGAFG00000013498	smarcad1a	100	56.726	ENSPNAG00000001663	smarcad1a	99	75.478	Pygocentrus_nattereri
ENSGAFG00000013498	smarcad1a	82	66.509	ENSRNOG00000006391	Smarcad1	90	66.509	Rattus_norvegicus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSRBIG00000041989	SMARCAD1	90	66.667	Rhinopithecus_bieti
ENSGAFG00000013498	smarcad1a	60	66.667	ENSRROG00000035309	SMARCAD1	90	66.667	Rhinopithecus_roxellana
ENSGAFG00000013498	smarcad1a	60	66.825	ENSSBOG00000032114	SMARCAD1	99	67.003	Saimiri_boliviensis_boliviensis
ENSGAFG00000013498	smarcad1a	74	66.667	ENSSHAG00000001279	SMARCAD1	74	66.667	Sarcophilus_harrisii
ENSGAFG00000013498	smarcad1a	100	54.037	ENSSFOG00015016814	smarcad1b	99	78.025	Scleropages_formosus
ENSGAFG00000013498	smarcad1a	60	74.485	ENSSFOG00015020909	smarcad1a	84	74.485	Scleropages_formosus
ENSGAFG00000013498	smarcad1a	100	68.885	ENSSMAG00000001326	smarcad1a	100	69.335	Scophthalmus_maximus
ENSGAFG00000013498	smarcad1a	71	74.121	ENSSDUG00000022338	smarcad1a	99	72.869	Seriola_dumerili
ENSGAFG00000013498	smarcad1a	100	67.482	ENSSLDG00000024986	smarcad1a	100	68.445	Seriola_lalandi_dorsalis
ENSGAFG00000013498	smarcad1a	56	67.059	ENSSPUG00000004633	SMARCAD1	99	67.059	Sphenodon_punctatus
ENSGAFG00000013498	smarcad1a	100	70.481	ENSSPAG00000001970	smarcad1a	100	70.780	Stegastes_partitus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSSSCG00000009193	SMARCAD1	90	66.667	Sus_scrofa
ENSGAFG00000013498	smarcad1a	60	67.508	ENSTGUG00000003127	SMARCAD1	81	67.508	Taeniopygia_guttata
ENSGAFG00000013498	smarcad1a	91	65.312	ENSTNIG00000017585	smarcad1a	95	79.399	Tetraodon_nigroviridis
ENSGAFG00000013498	smarcad1a	73	73.529	ENSTBEG00000002789	SMARCAD1	81	73.529	Tupaia_belangeri
ENSGAFG00000013498	smarcad1a	60	66.404	ENSTTRG00000000226	SMARCAD1	76	66.404	Tursiops_truncatus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSUAMG00000022262	SMARCAD1	90	66.667	Ursus_americanus
ENSGAFG00000013498	smarcad1a	60	66.667	ENSUMAG00000004549	SMARCAD1	90	66.667	Ursus_maritimus
ENSGAFG00000013498	smarcad1a	60	66.351	ENSVVUG00000007271	SMARCAD1	90	66.351	Vulpes_vulpes
ENSGAFG00000013498	smarcad1a	63	59.820	ENSXETG00000019214	smarcad1	98	61.732	Xenopus_tropicalis
ENSGAFG00000013498	smarcad1a	75	97.143	ENSXCOG00000005232	smarcad1a	86	97.143	Xiphophorus_couchianus
ENSGAFG00000013498	smarcad1a	100	91.101	ENSXMAG00000015350	smarcad1a	100	91.101	Xiphophorus_maculatus