EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000013561 (Gene tree)
Gene ID: -
Gene Symbol: rabl6b
Alias: si:ch211-102c2.5
Full Name: RAB%2C member RAS oncogene family-like 6b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 17585 bases
Position: chrNHOQ01002301.1:5423930-5441514
Accession: ZDB-GENE-081104-97
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000020074	MMR_HSR1	PF01926.23	5.7e-05	1	1
ENSGAFP00000020087	MMR_HSR1	PF01926.23	0.0001	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000020259	-	1290	-	ENSGAFP00000020074	429 (aa)	-	-
ENSGAFT00000020272	-	2034	-	ENSGAFP00000020087	677 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013561's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013561's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013561	rabl6b	100	73.748	ENSACIG00000010721	rabl6b	100	73.884	Amphilophus_citrinellus
ENSGAFG00000013561	rabl6b	100	80.000	ENSATEG00000012055	rabl6b	100	78.226	Anabas_testudineus
ENSGAFG00000013561	rabl6b	100	58.514	ENSAMXG00000038771	rabl6b	100	57.297	Astyanax_mexicanus
ENSGAFG00000013561	rabl6b	99	73.431	ENSCSEG00000012430	-	100	68.861	Cynoglossus_semilaevis
ENSGAFG00000013561	rabl6b	99	74.066	ENSCSEG00000016135	rabl6b	100	71.410	Cynoglossus_semilaevis
ENSGAFG00000013561	rabl6b	99	66.736	ENSDARG00000077653	rabl6b	99	62.861	Danio_rerio
ENSGAFG00000013561	rabl6b	95	71.861	ENSELUG00000004448	rabl6b	100	65.026	Esox_lucius
ENSGAFG00000013561	rabl6b	99	75.884	ENSGACG00000005242	rabl6b	100	74.799	Gasterosteus_aculeatus
ENSGAFG00000013561	rabl6b	100	77.540	ENSHBUG00000014235	rabl6b	100	78.209	Haplochromis_burtoni
ENSGAFG00000013561	rabl6b	99	70.726	ENSIPUG00000019266	rabl6	100	62.024	Ictalurus_punctatus
ENSGAFG00000013561	rabl6b	99	64.286	ENSLOCG00000001402	rabl6b	79	88.163	Lepisosteus_oculatus
ENSGAFG00000013561	rabl6b	100	76.907	ENSMAMG00000019516	rabl6b	100	76.197	Mastacembelus_armatus
ENSGAFG00000013561	rabl6b	99	68.421	ENSMZEG00005003942	rabl6b	100	68.842	Maylandia_zebra
ENSGAFG00000013561	rabl6b	99	75.973	ENSMMOG00000009459	rabl6b	98	75.113	Mola_mola
ENSGAFG00000013561	rabl6b	100	78.661	ENSMALG00000002029	rabl6b	100	76.738	Monopterus_albus
ENSGAFG00000013561	rabl6b	99	68.354	ENSNBRG00000012512	rabl6b	100	68.776	Neolamprologus_brichardi
ENSGAFG00000013561	rabl6b	100	80.610	ENSONIG00000010408	rabl6b	100	79.586	Oreochromis_niloticus
ENSGAFG00000013561	rabl6b	100	78.027	ENSORLG00020017557	rabl6b	100	75.335	Oryzias_latipes_hni
ENSGAFG00000013561	rabl6b	99	76.632	ENSORLG00015007848	rabl6b	90	83.130	Oryzias_latipes_hsok
ENSGAFG00000013561	rabl6b	100	75.420	ENSOMEG00000022840	rabl6b	97	76.807	Oryzias_melastigma
ENSGAFG00000013561	rabl6b	50	45.989	ENSPKIG00000007459	RABL6	100	60.053	Paramormyrops_kingsleyae
ENSGAFG00000013561	rabl6b	95	64.731	ENSPCIG00000023722	RABL6	92	59.033	Phascolarctos_cinereus
ENSGAFG00000013561	rabl6b	100	83.069	ENSPFOG00000003250	rabl6b	100	86.096	Poecilia_formosa
ENSGAFG00000013561	rabl6b	100	82.937	ENSPLAG00000019562	rabl6b	100	85.963	Poecilia_latipinna
ENSGAFG00000013561	rabl6b	100	83.333	ENSPMEG00000020472	rabl6b	100	86.364	Poecilia_mexicana
ENSGAFG00000013561	rabl6b	100	86.611	ENSPREG00000014116	rabl6b	95	88.410	Poecilia_reticulata
ENSGAFG00000013561	rabl6b	97	70.575	ENSPNAG00000010857	rabl6b	100	64.124	Pygocentrus_nattereri
ENSGAFG00000013561	rabl6b	99	66.876	ENSSFOG00015013414	-	99	64.071	Scleropages_formosus
ENSGAFG00000013561	rabl6b	97	73.483	ENSSFOG00015017388	RABL6	100	65.887	Scleropages_formosus
ENSGAFG00000013561	rabl6b	100	78.661	ENSSMAG00000012543	rabl6b	97	78.158	Scophthalmus_maximus
ENSGAFG00000013561	rabl6b	100	79.916	ENSSDUG00000006564	rabl6b	100	78.238	Seriola_dumerili
ENSGAFG00000013561	rabl6b	100	76.573	ENSSPAG00000021033	rabl6b	100	79.702	Stegastes_partitus
ENSGAFG00000013561	rabl6b	99	68.443	ENSTNIG00000010595	rabl6b	100	70.241	Tetraodon_nigroviridis