EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000013887 (Gene tree)
Gene ID: -
Gene Symbol: r3hdm2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 46735 bases
Position: chrNHOQ01002390.1:18010917-18057651
Accession: ZDB-GENE-180313-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000020617	R3H	PF01424.22	8.5e-11	1	1
ENSGAFP00000020610	R3H	PF01424.22	9e-11	1	1
ENSGAFP00000020591	R3H	PF01424.22	9.3e-11	1	1
ENSGAFP00000020602	R3H	PF01424.22	1e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000020783	-	5535	-	ENSGAFP00000020591	1098 (aa)	-	-
ENSGAFT00000020803	-	4898	-	ENSGAFP00000020610	1071 (aa)	-	-
ENSGAFT00000020794	-	5481	-	ENSGAFP00000020602	1080 (aa)	-	-
ENSGAFT00000020810	-	2766	-	ENSGAFP00000020617	921 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000013887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000013887's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000013887	r3hdm2	100	66.881	ENSG00000179912	R3HDM2	89	81.600	Homo_sapiens
ENSGAFG00000013887	r3hdm2	51	40.036	ENSAPOG00000021873	-	73	39.781	Acanthochromis_polyacanthus
ENSGAFG00000013887	r3hdm2	100	91.605	ENSAPOG00000020341	r3hdm2	100	92.606	Acanthochromis_polyacanthus
ENSGAFG00000013887	r3hdm2	95	67.311	ENSAMEG00000004812	R3HDM2	99	65.193	Ailuropoda_melanoleuca
ENSGAFG00000013887	r3hdm2	99	91.475	ENSACIG00000016146	r3hdm2	98	89.945	Amphilophus_citrinellus
ENSGAFG00000013887	r3hdm2	100	91.697	ENSAOCG00000023694	r3hdm2	100	92.699	Amphiprion_ocellaris
ENSGAFG00000013887	r3hdm2	100	90.129	ENSAPEG00000008851	r3hdm2	100	92.669	Amphiprion_percula
ENSGAFG00000013887	r3hdm2	100	88.248	ENSATEG00000025024	r3hdm2	100	89.005	Anabas_testudineus
ENSGAFG00000013887	r3hdm2	100	55.462	ENSAPLG00000004298	R3HDM2	99	60.195	Anas_platyrhynchos
ENSGAFG00000013887	r3hdm2	100	62.159	ENSACAG00000006388	R3HDM2	99	60.221	Anolis_carolinensis
ENSGAFG00000013887	r3hdm2	100	61.402	ENSANAG00000031310	-	96	63.130	Aotus_nancymaae
ENSGAFG00000013887	r3hdm2	100	66.881	ENSANAG00000025397	-	99	63.525	Aotus_nancymaae
ENSGAFG00000013887	r3hdm2	100	91.405	ENSACLG00000019106	r3hdm2	100	92.279	Astatotilapia_calliptera
ENSGAFG00000013887	r3hdm2	100	70.662	ENSAMXG00000017180	r3hdm2	99	72.718	Astyanax_mexicanus
ENSGAFG00000013887	r3hdm2	100	63.938	ENSBTAG00000018361	R3HDM2	99	63.148	Bos_taurus
ENSGAFG00000013887	r3hdm2	100	66.418	ENSCJAG00000007365	R3HDM2	99	63.431	Callithrix_jacchus
ENSGAFG00000013887	r3hdm2	100	64.360	ENSCAFG00000000215	R3HDM2	99	63.168	Canis_familiaris
ENSGAFG00000013887	r3hdm2	100	66.667	ENSCAFG00020023713	R3HDM2	99	65.466	Canis_lupus_dingo
ENSGAFG00000013887	r3hdm2	100	64.638	ENSCHIG00000014022	R3HDM2	99	65.478	Capra_hircus
ENSGAFG00000013887	r3hdm2	100	66.024	ENSTSYG00000001449	R3HDM2	99	63.148	Carlito_syrichta
ENSGAFG00000013887	r3hdm2	99	66.019	ENSCPOG00000009217	R3HDM2	99	65.185	Cavia_porcellus
ENSGAFG00000013887	r3hdm2	86	67.405	ENSCCAG00000026083	R3HDM2	99	63.462	Cebus_capucinus
ENSGAFG00000013887	r3hdm2	100	66.774	ENSCATG00000036929	R3HDM2	99	65.385	Cercocebus_atys
ENSGAFG00000013887	r3hdm2	100	65.150	ENSCLAG00000011997	R3HDM2	99	65.957	Chinchilla_lanigera
ENSGAFG00000013887	r3hdm2	99	64.391	ENSCSAG00000004911	R3HDM2	99	65.508	Chlorocebus_sabaeus
ENSGAFG00000013887	r3hdm2	74	66.203	ENSCHOG00000005636	R3HDM2	89	67.460	Choloepus_hoffmanni
ENSGAFG00000013887	r3hdm2	100	61.227	ENSCPBG00000013922	R3HDM2	99	63.134	Chrysemys_picta_bellii
ENSGAFG00000013887	r3hdm2	100	65.565	ENSCANG00000043807	R3HDM2	99	65.197	Colobus_angolensis_palliatus
ENSGAFG00000013887	r3hdm2	100	63.289	ENSCGRG00001017324	R3hdm2	99	64.292	Cricetulus_griseus_chok1gshd
ENSGAFG00000013887	r3hdm2	100	63.484	ENSCGRG00000003862	R3hdm2	99	64.292	Cricetulus_griseus_crigri
ENSGAFG00000013887	r3hdm2	100	89.694	ENSCSEG00000010925	r3hdm2	100	89.694	Cynoglossus_semilaevis
ENSGAFG00000013887	r3hdm2	100	96.086	ENSCVAG00000009058	r3hdm2	100	96.209	Cyprinodon_variegatus
ENSGAFG00000013887	r3hdm2	99	70.613	ENSDARG00000102610	r3hdm2	99	74.004	Danio_rerio
ENSGAFG00000013887	r3hdm2	99	63.477	ENSDNOG00000015033	R3HDM2	100	66.213	Dasypus_novemcinctus
ENSGAFG00000013887	r3hdm2	100	63.598	ENSDORG00000011462	R3hdm2	98	65.126	Dipodomys_ordii
ENSGAFG00000013887	r3hdm2	100	64.389	ENSEASG00005007091	R3HDM2	99	65.833	Equus_asinus_asinus
ENSGAFG00000013887	r3hdm2	100	64.300	ENSECAG00000003157	R3HDM2	99	65.741	Equus_caballus
ENSGAFG00000013887	r3hdm2	100	78.834	ENSELUG00000015969	r3hdm2	100	79.008	Esox_lucius
ENSGAFG00000013887	r3hdm2	100	66.238	ENSFCAG00000000192	R3HDM2	98	65.024	Felis_catus
ENSGAFG00000013887	r3hdm2	81	63.254	ENSFALG00000000255	R3HDM2	99	59.871	Ficedula_albicollis
ENSGAFG00000013887	r3hdm2	100	63.983	ENSFDAG00000019385	R3HDM2	99	65.005	Fukomys_damarensis
ENSGAFG00000013887	r3hdm2	100	97.204	ENSFHEG00000016484	r3hdm2	100	97.204	Fundulus_heteroclitus
ENSGAFG00000013887	r3hdm2	95	82.290	ENSGMOG00000007961	r3hdm2	100	82.877	Gadus_morhua
ENSGAFG00000013887	r3hdm2	100	64.158	ENSGALG00000043736	R3HDM2	99	63.594	Gallus_gallus
ENSGAFG00000013887	r3hdm2	95	89.932	ENSGACG00000006442	r3hdm2	100	90.029	Gasterosteus_aculeatus
ENSGAFG00000013887	r3hdm2	100	61.996	ENSGAGG00000017797	R3HDM2	99	62.657	Gopherus_agassizii
ENSGAFG00000013887	r3hdm2	100	66.667	ENSGGOG00000015007	R3HDM2	99	65.385	Gorilla_gorilla
ENSGAFG00000013887	r3hdm2	52	37.583	ENSHBUG00000018525	-	74	39.312	Haplochromis_burtoni
ENSGAFG00000013887	r3hdm2	94	60.204	ENSHGLG00000010421	-	97	58.737	Heterocephalus_glaber_female
ENSGAFG00000013887	r3hdm2	100	64.811	ENSHGLG00000010434	-	99	65.185	Heterocephalus_glaber_female
ENSGAFG00000013887	r3hdm2	97	58.811	ENSHGLG00100018871	-	96	56.897	Heterocephalus_glaber_male
ENSGAFG00000013887	r3hdm2	100	64.389	ENSHGLG00100004183	-	99	65.093	Heterocephalus_glaber_male
ENSGAFG00000013887	r3hdm2	100	87.021	ENSHCOG00000001142	r3hdm2	99	87.313	Hippocampus_comes
ENSGAFG00000013887	r3hdm2	100	75.316	ENSIPUG00000023873	r3hdm2	100	76.888	Ictalurus_punctatus
ENSGAFG00000013887	r3hdm2	100	64.241	ENSSTOG00000013424	R3HDM2	99	59.074	Ictidomys_tridecemlineatus
ENSGAFG00000013887	r3hdm2	100	64.842	ENSJJAG00000010001	R3hdm2	99	65.189	Jaculus_jaculus
ENSGAFG00000013887	r3hdm2	52	36.949	ENSKMAG00000004052	-	73	37.782	Kryptolebias_marmoratus
ENSGAFG00000013887	r3hdm2	100	92.851	ENSKMAG00000012695	r3hdm2	99	92.929	Kryptolebias_marmoratus
ENSGAFG00000013887	r3hdm2	100	90.463	ENSLBEG00000013115	r3hdm2	99	89.250	Labrus_bergylta
ENSGAFG00000013887	r3hdm2	51	39.092	ENSLBEG00000002779	-	79	39.154	Labrus_bergylta
ENSGAFG00000013887	r3hdm2	95	66.989	ENSLACG00000019064	r3hdm2	100	65.698	Latimeria_chalumnae
ENSGAFG00000013887	r3hdm2	100	74.224	ENSLOCG00000005976	r3hdm2	99	72.102	Lepisosteus_oculatus
ENSGAFG00000013887	r3hdm2	99	66.047	ENSLAFG00000006510	R3HDM2	99	66.326	Loxodonta_africana
ENSGAFG00000013887	r3hdm2	100	66.774	ENSMFAG00000036385	R3HDM2	99	65.385	Macaca_fascicularis
ENSGAFG00000013887	r3hdm2	100	66.774	ENSMMUG00000021789	R3HDM2	99	65.926	Macaca_mulatta
ENSGAFG00000013887	r3hdm2	100	66.916	ENSMNEG00000025314	R3HDM2	99	65.385	Macaca_nemestrina
ENSGAFG00000013887	r3hdm2	100	66.881	ENSMLEG00000028915	R3HDM2	99	65.478	Mandrillus_leucophaeus
ENSGAFG00000013887	r3hdm2	100	92.108	ENSMAMG00000009793	r3hdm2	100	92.301	Mastacembelus_armatus
ENSGAFG00000013887	r3hdm2	100	91.405	ENSMZEG00005007319	r3hdm2	100	91.852	Maylandia_zebra
ENSGAFG00000013887	r3hdm2	100	66.382	ENSMICG00000012389	R3HDM2	99	62.419	Microcebus_murinus
ENSGAFG00000013887	r3hdm2	99	64.597	ENSMOCG00000014425	R3hdm2	99	64.815	Microtus_ochrogaster
ENSGAFG00000013887	r3hdm2	100	85.972	ENSMMOG00000007448	r3hdm2	99	85.593	Mola_mola
ENSGAFG00000013887	r3hdm2	87	86.348	ENSMALG00000010211	r3hdm2	98	85.106	Monopterus_albus
ENSGAFG00000013887	r3hdm2	100	63.903	MGP_CAROLIEiJ_G0015896	R3hdm2	99	64.662	Mus_caroli
ENSGAFG00000013887	r3hdm2	100	64.181	ENSMUSG00000025404	R3hdm2	99	64.907	Mus_musculus
ENSGAFG00000013887	r3hdm2	100	63.627	MGP_PahariEiJ_G0031189	R3hdm2	99	64.907	Mus_pahari
ENSGAFG00000013887	r3hdm2	100	64.151	MGP_SPRETEiJ_G0016722	R3hdm2	99	64.603	Mus_spretus
ENSGAFG00000013887	r3hdm2	97	64.817	ENSMPUG00000001818	R3HDM2	97	64.411	Mustela_putorius_furo
ENSGAFG00000013887	r3hdm2	99	65.278	ENSMLUG00000004980	R3HDM2	99	65.185	Myotis_lucifugus
ENSGAFG00000013887	r3hdm2	99	65.037	ENSNGAG00000018800	R3hdm2	99	65.648	Nannospalax_galili
ENSGAFG00000013887	r3hdm2	100	91.314	ENSNBRG00000004483	r3hdm2	99	91.097	Neolamprologus_brichardi
ENSGAFG00000013887	r3hdm2	100	66.774	ENSNLEG00000017351	R3HDM2	99	65.478	Nomascus_leucogenys
ENSGAFG00000013887	r3hdm2	99	56.984	ENSMEUG00000008588	R3HDM2	99	56.377	Notamacropus_eugenii
ENSGAFG00000013887	r3hdm2	100	61.725	ENSOPRG00000013670	R3HDM2	99	56.865	Ochotona_princeps
ENSGAFG00000013887	r3hdm2	100	88.784	ENSONIG00000005075	r3hdm2	100	87.856	Oreochromis_niloticus
ENSGAFG00000013887	r3hdm2	99	65.097	ENSOCUG00000013258	R3HDM2	99	65.097	Oryctolagus_cuniculus
ENSGAFG00000013887	r3hdm2	100	90.019	ENSORLG00000005502	r3hdm2	100	90.401	Oryzias_latipes
ENSGAFG00000013887	r3hdm2	100	90.019	ENSORLG00020017069	r3hdm2	100	90.427	Oryzias_latipes_hni
ENSGAFG00000013887	r3hdm2	100	90.112	ENSORLG00015012735	r3hdm2	100	90.521	Oryzias_latipes_hsok
ENSGAFG00000013887	r3hdm2	99	87.202	ENSOMEG00000018079	r3hdm2	93	87.296	Oryzias_melastigma
ENSGAFG00000013887	r3hdm2	96	57.128	ENSOGAG00000027966	-	99	56.027	Otolemur_garnettii
ENSGAFG00000013887	r3hdm2	100	61.771	ENSOGAG00000012055	R3HDM2	99	62.970	Otolemur_garnettii
ENSGAFG00000013887	r3hdm2	100	63.515	ENSOARG00000006929	R3HDM2	99	63.064	Ovis_aries
ENSGAFG00000013887	r3hdm2	100	66.881	ENSPPAG00000034395	R3HDM2	99	65.572	Pan_paniscus
ENSGAFG00000013887	r3hdm2	100	66.238	ENSPPRG00000009240	R3HDM2	99	62.594	Panthera_pardus
ENSGAFG00000013887	r3hdm2	100	66.238	ENSPTIG00000008752	R3HDM2	99	62.594	Panthera_tigris_altaica
ENSGAFG00000013887	r3hdm2	100	66.774	ENSPTRG00000046457	R3HDM2	99	65.478	Pan_troglodytes
ENSGAFG00000013887	r3hdm2	100	66.774	ENSPANG00000024002	R3HDM2	96	66.595	Papio_anubis
ENSGAFG00000013887	r3hdm2	100	79.701	ENSPKIG00000003171	r3hdm2	100	79.811	Paramormyrops_kingsleyae
ENSGAFG00000013887	r3hdm2	65	53.090	ENSPSIG00000006954	R3HDM2	99	52.601	Pelodiscus_sinensis
ENSGAFG00000013887	r3hdm2	99	87.650	ENSPMGG00000007061	r3hdm2	99	87.432	Periophthalmus_magnuspinnatus
ENSGAFG00000013887	r3hdm2	100	63.627	ENSPEMG00000015964	R3hdm2	99	64.167	Peromyscus_maniculatus_bairdii
ENSGAFG00000013887	r3hdm2	100	64.038	ENSPCIG00000023841	R3HDM2	99	62.277	Phascolarctos_cinereus
ENSGAFG00000013887	r3hdm2	99	83.126	ENSPFOG00000006077	r3hdm2	98	85.000	Poecilia_formosa
ENSGAFG00000013887	r3hdm2	100	99.025	ENSPLAG00000002971	r3hdm2	100	99.147	Poecilia_latipinna
ENSGAFG00000013887	r3hdm2	100	99.025	ENSPMEG00000005330	r3hdm2	100	99.147	Poecilia_mexicana
ENSGAFG00000013887	r3hdm2	100	98.602	ENSPREG00000008424	r3hdm2	100	98.602	Poecilia_reticulata
ENSGAFG00000013887	r3hdm2	97	62.284	ENSPPYG00000004685	R3HDM2	80	58.239	Pongo_abelii
ENSGAFG00000013887	r3hdm2	88	78.445	ENSPCAG00000014642	R3HDM2	92	79.505	Procavia_capensis
ENSGAFG00000013887	r3hdm2	100	66.238	ENSPCOG00000013201	R3HDM2	99	63.242	Propithecus_coquereli
ENSGAFG00000013887	r3hdm2	99	65.556	ENSPVAG00000003967	R3HDM2	99	65.463	Pteropus_vampyrus
ENSGAFG00000013887	r3hdm2	99	82.304	ENSPNYG00000013479	r3hdm2	100	83.434	Pundamilia_nyererei
ENSGAFG00000013887	r3hdm2	100	75.543	ENSPNAG00000017473	r3hdm2	100	77.355	Pygocentrus_nattereri
ENSGAFG00000013887	r3hdm2	100	63.082	ENSRNOG00000007801	R3hdm2	99	64.107	Rattus_norvegicus
ENSGAFG00000013887	r3hdm2	100	62.798	ENSRBIG00000037403	R3HDM2	99	61.828	Rhinopithecus_bieti
ENSGAFG00000013887	r3hdm2	100	66.881	ENSRROG00000022271	R3HDM2	99	65.478	Rhinopithecus_roxellana
ENSGAFG00000013887	r3hdm2	100	66.418	ENSSBOG00000023547	R3HDM2	99	63.431	Saimiri_boliviensis_boliviensis
ENSGAFG00000013887	r3hdm2	99	63.494	ENSSHAG00000003511	R3HDM2	99	63.220	Sarcophilus_harrisii
ENSGAFG00000013887	r3hdm2	100	76.280	ENSSFOG00015011219	r3hdm2	99	75.653	Scleropages_formosus
ENSGAFG00000013887	r3hdm2	100	90.968	ENSSMAG00000012073	r3hdm2	100	91.155	Scophthalmus_maximus
ENSGAFG00000013887	r3hdm2	100	90.269	ENSSDUG00000019269	r3hdm2	100	91.902	Seriola_dumerili
ENSGAFG00000013887	r3hdm2	100	91.829	ENSSLDG00000005252	r3hdm2	100	92.115	Seriola_lalandi_dorsalis
ENSGAFG00000013887	r3hdm2	94	60.590	ENSSARG00000003958	R3HDM2	91	59.549	Sorex_araneus
ENSGAFG00000013887	r3hdm2	100	60.563	ENSSPUG00000014132	R3HDM2	99	58.577	Sphenodon_punctatus
ENSGAFG00000013887	r3hdm2	100	90.018	ENSSPAG00000022594	r3hdm2	100	92.481	Stegastes_partitus
ENSGAFG00000013887	r3hdm2	100	66.311	ENSSSCG00000026498	R3HDM2	100	66.812	Sus_scrofa
ENSGAFG00000013887	r3hdm2	73	63.371	ENSTGUG00000015881	R3HDM2	99	61.626	Taeniopygia_guttata
ENSGAFG00000013887	r3hdm2	100	89.069	ENSTRUG00000015075	r3hdm2	98	89.610	Takifugu_rubripes
ENSGAFG00000013887	r3hdm2	88	95.330	ENSTNIG00000007057	r3hdm2	89	95.330	Tetraodon_nigroviridis
ENSGAFG00000013887	r3hdm2	82	64.726	ENSTBEG00000015967	R3HDM2	78	65.753	Tupaia_belangeri
ENSGAFG00000013887	r3hdm2	92	65.054	ENSTTRG00000013082	R3HDM2	94	63.830	Tursiops_truncatus
ENSGAFG00000013887	r3hdm2	100	64.456	ENSUAMG00000020913	R3HDM2	99	65.352	Ursus_americanus
ENSGAFG00000013887	r3hdm2	96	66.000	ENSUMAG00000019179	R3HDM2	96	65.762	Ursus_maritimus
ENSGAFG00000013887	r3hdm2	90	80.328	ENSVPAG00000008656	R3HDM2	89	80.135	Vicugna_pacos
ENSGAFG00000013887	r3hdm2	93	67.197	ENSVVUG00000018014	R3HDM2	95	65.312	Vulpes_vulpes
ENSGAFG00000013887	r3hdm2	100	61.411	ENSXETG00000017153	r3hdm2	99	60.405	Xenopus_tropicalis
ENSGAFG00000013887	r3hdm2	92	98.588	ENSXCOG00000013882	r3hdm2	100	98.588	Xiphophorus_couchianus
ENSGAFG00000013887	r3hdm2	100	98.788	ENSXMAG00000017978	r3hdm2	100	98.788	Xiphophorus_maculatus