EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000014249 (Gene tree)
Gene ID: -
Gene Symbol: crnkl1
Alias: zgc:55327
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 9432 bases
Position: chrNHOQ01000884.1:121853-131284
Accession: ZDB-GENE-040426-694
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021127	HAT	PF02184.16	2e-36	1	2
ENSGAFP00000021127	HAT	PF02184.16	2e-36	2	2
ENSGAFP00000021137	HAT	PF02184.16	1.1e-31	1	2
ENSGAFP00000021137	HAT	PF02184.16	1.1e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000021334	-	5440	-	ENSGAFP00000021137	681 (aa)	-	-
ENSGAFT00000021324	-	6005	-	ENSGAFP00000021127	761 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014249's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014249's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014249	crnkl1	90	84.672	ENSG00000101343	CRNKL1	97	86.336	Homo_sapiens
ENSGAFG00000014249	crnkl1	93	91.690	ENSAPOG00000009705	crnkl1	97	93.592	Acanthochromis_polyacanthus
ENSGAFG00000014249	crnkl1	93	83.711	ENSAMEG00000000270	CRNKL1	83	85.444	Ailuropoda_melanoleuca
ENSGAFG00000014249	crnkl1	95	88.350	ENSACIG00000015267	crnkl1	98	85.965	Amphilophus_citrinellus
ENSGAFG00000014249	crnkl1	93	92.254	ENSAOCG00000021964	crnkl1	93	92.079	Amphiprion_ocellaris
ENSGAFG00000014249	crnkl1	93	92.362	ENSAPEG00000015041	crnkl1	94	92.079	Amphiprion_percula
ENSGAFG00000014249	crnkl1	94	89.341	ENSATEG00000001068	crnkl1	88	92.975	Anabas_testudineus
ENSGAFG00000014249	crnkl1	87	85.455	ENSAPLG00000013105	CRNKL1	97	84.708	Anas_platyrhynchos
ENSGAFG00000014249	crnkl1	89	86.370	ENSACAG00000005284	CRNKL1	98	86.736	Anolis_carolinensis
ENSGAFG00000014249	crnkl1	83	86.349	ENSANAG00000024889	CRNKL1	99	86.349	Aotus_nancymaae
ENSGAFG00000014249	crnkl1	94	89.598	ENSACLG00000010813	crnkl1	89	94.311	Astatotilapia_calliptera
ENSGAFG00000014249	crnkl1	90	88.379	ENSAMXG00000018334	crnkl1	90	91.154	Astyanax_mexicanus
ENSGAFG00000014249	crnkl1	90	85.526	ENSBTAG00000008472	CRNKL1	96	87.237	Bos_taurus
ENSGAFG00000014249	crnkl1	84	63.919	WBGene00019762	M03F8.3	88	64.145	Caenorhabditis_elegans
ENSGAFG00000014249	crnkl1	91	84.470	ENSCJAG00000005393	CRNKL1	97	86.486	Callithrix_jacchus
ENSGAFG00000014249	crnkl1	89	85.441	ENSCAFG00000005333	CRNKL1	91	87.237	Canis_familiaris
ENSGAFG00000014249	crnkl1	90	85.547	ENSCAFG00020027488	CRNKL1	97	87.237	Canis_lupus_dingo
ENSGAFG00000014249	crnkl1	90	84.503	ENSCHIG00000013171	CRNKL1	96	86.336	Capra_hircus
ENSGAFG00000014249	crnkl1	90	84.302	ENSTSYG00000004197	CRNKL1	97	86.336	Carlito_syrichta
ENSGAFG00000014249	crnkl1	84	82.692	ENSCAPG00000010501	CRNKL1	96	85.142	Cavia_aperea
ENSGAFG00000014249	crnkl1	90	84.526	ENSCPOG00000004418	CRNKL1	97	86.186	Cavia_porcellus
ENSGAFG00000014249	crnkl1	91	84.325	ENSCCAG00000027037	CRNKL1	97	86.336	Cebus_capucinus
ENSGAFG00000014249	crnkl1	90	84.526	ENSCATG00000034247	CRNKL1	97	86.186	Cercocebus_atys
ENSGAFG00000014249	crnkl1	90	84.818	ENSCLAG00000013859	CRNKL1	97	86.486	Chinchilla_lanigera
ENSGAFG00000014249	crnkl1	90	84.526	ENSCSAG00000011434	CRNKL1	97	86.186	Chlorocebus_sabaeus
ENSGAFG00000014249	crnkl1	89	84.706	ENSCHOG00000006371	CRNKL1	81	86.486	Choloepus_hoffmanni
ENSGAFG00000014249	crnkl1	89	86.944	ENSCPBG00000023501	CRNKL1	98	87.034	Chrysemys_picta_bellii
ENSGAFG00000014249	crnkl1	87	68.722	ENSCING00000002709	-	97	68.722	Ciona_intestinalis
ENSGAFG00000014249	crnkl1	90	84.526	ENSCANG00000038789	CRNKL1	97	86.186	Colobus_angolensis_palliatus
ENSGAFG00000014249	crnkl1	90	84.818	ENSCGRG00001001115	-	97	86.486	Cricetulus_griseus_chok1gshd
ENSGAFG00000014249	crnkl1	90	84.818	ENSCGRG00001000687	-	97	86.486	Cricetulus_griseus_chok1gshd
ENSGAFG00000014249	crnkl1	90	84.818	ENSCGRG00000007854	Crnkl1	97	86.486	Cricetulus_griseus_crigri
ENSGAFG00000014249	crnkl1	94	88.703	ENSCSEG00000005594	crnkl1	85	93.145	Cynoglossus_semilaevis
ENSGAFG00000014249	crnkl1	88	97.156	ENSCVAG00000015172	crnkl1	100	91.386	Cyprinodon_variegatus
ENSGAFG00000014249	crnkl1	94	86.872	ENSDARG00000007901	crnkl1	95	86.732	Danio_rerio
ENSGAFG00000014249	crnkl1	90	85.007	ENSDNOG00000016226	CRNKL1	92	86.937	Dasypus_novemcinctus
ENSGAFG00000014249	crnkl1	90	83.502	ENSDORG00000000394	-	97	85.119	Dipodomys_ordii
ENSGAFG00000014249	crnkl1	88	78.689	ENSDORG00000030174	-	99	78.689	Dipodomys_ordii
ENSGAFG00000014249	crnkl1	88	79.372	ENSDORG00000023724	-	99	79.372	Dipodomys_ordii
ENSGAFG00000014249	crnkl1	87	69.670	FBgn0000377	crn	95	69.670	Drosophila_melanogaster
ENSGAFG00000014249	crnkl1	87	81.378	ENSETEG00000003711	CRNKL1	82	81.378	Echinops_telfairi
ENSGAFG00000014249	crnkl1	89	61.924	ENSEBUG00000013461	crnkl1	94	59.016	Eptatretus_burgeri
ENSGAFG00000014249	crnkl1	89	86.222	ENSEASG00005002072	CRNKL1	97	87.237	Equus_asinus_asinus
ENSGAFG00000014249	crnkl1	89	86.222	ENSECAG00000022215	CRNKL1	97	87.237	Equus_caballus
ENSGAFG00000014249	crnkl1	93	79.859	ENSEEUG00000000413	CRNKL1	93	81.766	Erinaceus_europaeus
ENSGAFG00000014249	crnkl1	88	89.355	ENSELUG00000015424	crnkl1	97	87.773	Esox_lucius
ENSGAFG00000014249	crnkl1	90	85.547	ENSFCAG00000000714	CRNKL1	97	87.237	Felis_catus
ENSGAFG00000014249	crnkl1	86	86.524	ENSFALG00000004611	CRNKL1	97	86.524	Ficedula_albicollis
ENSGAFG00000014249	crnkl1	90	85.109	ENSFDAG00000000604	CRNKL1	97	86.787	Fukomys_damarensis
ENSGAFG00000014249	crnkl1	97	88.672	ENSFHEG00000013163	crnkl1	97	90.521	Fundulus_heteroclitus
ENSGAFG00000014249	crnkl1	88	90.120	ENSGMOG00000007609	crnkl1	93	89.881	Gadus_morhua
ENSGAFG00000014249	crnkl1	88	87.106	ENSGALG00000008429	CRNKL1	97	87.106	Gallus_gallus
ENSGAFG00000014249	crnkl1	93	87.275	ENSGACG00000011852	crnkl1	90	91.667	Gasterosteus_aculeatus
ENSGAFG00000014249	crnkl1	85	85.404	ENSGAGG00000021233	CRNKL1	98	85.491	Gopherus_agassizii
ENSGAFG00000014249	crnkl1	90	84.672	ENSGGOG00000014176	CRNKL1	97	86.336	Gorilla_gorilla
ENSGAFG00000014249	crnkl1	97	87.186	ENSHBUG00000005246	crnkl1	88	94.461	Haplochromis_burtoni
ENSGAFG00000014249	crnkl1	89	85.778	ENSHGLG00000010856	CRNKL1	97	86.787	Heterocephalus_glaber_female
ENSGAFG00000014249	crnkl1	89	85.778	ENSHGLG00100011521	CRNKL1	97	86.787	Heterocephalus_glaber_male
ENSGAFG00000014249	crnkl1	88	89.805	ENSHCOG00000006420	crnkl1	97	89.450	Hippocampus_comes
ENSGAFG00000014249	crnkl1	89	76.219	ENSIPUG00000006836	-	98	76.532	Ictalurus_punctatus
ENSGAFG00000014249	crnkl1	85	89.214	ENSIPUG00000006751	crnkl1	90	89.247	Ictalurus_punctatus
ENSGAFG00000014249	crnkl1	83	70.283	ENSIPUG00000000315	-	99	71.496	Ictalurus_punctatus
ENSGAFG00000014249	crnkl1	90	85.255	ENSSTOG00000014747	CRNKL1	97	86.937	Ictidomys_tridecemlineatus
ENSGAFG00000014249	crnkl1	90	83.024	ENSJJAG00000016926	Crnkl1	97	84.604	Jaculus_jaculus
ENSGAFG00000014249	crnkl1	94	90.682	ENSKMAG00000003620	crnkl1	100	82.545	Kryptolebias_marmoratus
ENSGAFG00000014249	crnkl1	86	82.000	ENSLBEG00000003543	crnkl1	89	82.000	Labrus_bergylta
ENSGAFG00000014249	crnkl1	89	87.278	ENSLACG00000001129	CRNKL1	98	87.612	Latimeria_chalumnae
ENSGAFG00000014249	crnkl1	94	85.814	ENSLOCG00000016889	crnkl1	99	85.139	Lepisosteus_oculatus
ENSGAFG00000014249	crnkl1	90	84.548	ENSLAFG00000004512	CRNKL1	97	86.957	Loxodonta_africana
ENSGAFG00000014249	crnkl1	90	84.526	ENSMFAG00000039893	CRNKL1	97	86.186	Macaca_fascicularis
ENSGAFG00000014249	crnkl1	90	84.526	ENSMMUG00000007709	CRNKL1	97	86.186	Macaca_mulatta
ENSGAFG00000014249	crnkl1	90	84.526	ENSMNEG00000037490	CRNKL1	97	86.186	Macaca_nemestrina
ENSGAFG00000014249	crnkl1	90	84.526	ENSMLEG00000034885	CRNKL1	97	86.186	Mandrillus_leucophaeus
ENSGAFG00000014249	crnkl1	92	91.130	ENSMAMG00000008757	crnkl1	89	93.741	Mastacembelus_armatus
ENSGAFG00000014249	crnkl1	97	88.579	ENSMZEG00005022345	crnkl1	89	94.311	Maylandia_zebra
ENSGAFG00000014249	crnkl1	89	85.191	ENSMGAG00000003452	CRNKL1	93	85.926	Meleagris_gallopavo
ENSGAFG00000014249	crnkl1	90	84.818	ENSMAUG00000020764	Crnkl1	97	86.486	Mesocricetus_auratus
ENSGAFG00000014249	crnkl1	90	84.672	ENSMICG00000006048	CRNKL1	97	86.336	Microcebus_murinus
ENSGAFG00000014249	crnkl1	87	62.048	ENSMOCG00000004179	-	95	62.126	Microtus_ochrogaster
ENSGAFG00000014249	crnkl1	90	77.044	ENSMOCG00000000681	-	96	78.466	Microtus_ochrogaster
ENSGAFG00000014249	crnkl1	83	90.823	ENSMMOG00000017601	crnkl1	97	90.823	Mola_mola
ENSGAFG00000014249	crnkl1	89	83.140	ENSMODG00000005961	-	97	83.602	Monodelphis_domestica
ENSGAFG00000014249	crnkl1	90	79.270	ENSMODG00000010857	-	97	80.448	Monodelphis_domestica
ENSGAFG00000014249	crnkl1	97	61.879	ENSMALG00000011211	crnkl1	88	75.075	Monopterus_albus
ENSGAFG00000014249	crnkl1	89	85.926	MGP_CAROLIEiJ_G0024394	Crnkl1	97	86.787	Mus_caroli
ENSGAFG00000014249	crnkl1	90	85.109	ENSMUSG00000001767	Crnkl1	97	86.787	Mus_musculus
ENSGAFG00000014249	crnkl1	90	84.234	MGP_PahariEiJ_G0025838	Crnkl1	97	85.886	Mus_pahari
ENSGAFG00000014249	crnkl1	90	85.109	MGP_SPRETEiJ_G0025312	Crnkl1	97	86.787	Mus_spretus
ENSGAFG00000014249	crnkl1	90	85.547	ENSMPUG00000001226	CRNKL1	97	87.237	Mustela_putorius_furo
ENSGAFG00000014249	crnkl1	89	85.022	ENSMLUG00000016513	CRNKL1	86	86.807	Myotis_lucifugus
ENSGAFG00000014249	crnkl1	90	82.808	ENSNGAG00000023097	Crnkl1	97	84.389	Nannospalax_galili
ENSGAFG00000014249	crnkl1	94	89.736	ENSNBRG00000007867	crnkl1	88	94.461	Neolamprologus_brichardi
ENSGAFG00000014249	crnkl1	90	81.606	ENSNLEG00000009862	CRNKL1	97	83.183	Nomascus_leucogenys
ENSGAFG00000014249	crnkl1	91	79.740	ENSMEUG00000002361	-	98	81.009	Notamacropus_eugenii
ENSGAFG00000014249	crnkl1	88	85.202	ENSMEUG00000012167	-	98	86.565	Notamacropus_eugenii
ENSGAFG00000014249	crnkl1	77	59.496	ENSOPRG00000009242	-	61	59.496	Ochotona_princeps
ENSGAFG00000014249	crnkl1	90	84.672	ENSODEG00000012175	CRNKL1	97	86.336	Octodon_degus
ENSGAFG00000014249	crnkl1	95	89.583	ENSONIG00000018728	crnkl1	88	94.461	Oreochromis_niloticus
ENSGAFG00000014249	crnkl1	88	84.970	ENSOCUG00000015484	CRNKL1	82	85.735	Oryctolagus_cuniculus
ENSGAFG00000014249	crnkl1	94	87.552	ENSORLG00000017240	crnkl1	95	87.334	Oryzias_latipes
ENSGAFG00000014249	crnkl1	94	87.658	ENSORLG00020001742	crnkl1	90	91.654	Oryzias_latipes_hni
ENSGAFG00000014249	crnkl1	97	86.443	ENSORLG00015019564	crnkl1	90	91.803	Oryzias_latipes_hsok
ENSGAFG00000014249	crnkl1	94	88.268	ENSOMEG00000019895	crnkl1	90	92.399	Oryzias_melastigma
ENSGAFG00000014249	crnkl1	90	84.818	ENSOGAG00000011544	CRNKL1	97	86.486	Otolemur_garnettii
ENSGAFG00000014249	crnkl1	89	85.420	ENSOARG00000002150	CRNKL1	89	85.277	Ovis_aries
ENSGAFG00000014249	crnkl1	89	83.529	ENSPPAG00000027847	CRNKL1	84	82.973	Pan_paniscus
ENSGAFG00000014249	crnkl1	90	85.547	ENSPPRG00000001955	CRNKL1	97	87.237	Panthera_pardus
ENSGAFG00000014249	crnkl1	90	85.547	ENSPTIG00000007393	CRNKL1	97	87.237	Panthera_tigris_altaica
ENSGAFG00000014249	crnkl1	90	84.672	ENSPTRG00000030609	CRNKL1	97	86.336	Pan_troglodytes
ENSGAFG00000014249	crnkl1	90	84.526	ENSPANG00000017420	CRNKL1	97	86.186	Papio_anubis
ENSGAFG00000014249	crnkl1	87	86.036	ENSPKIG00000017093	crnkl1	88	85.460	Paramormyrops_kingsleyae
ENSGAFG00000014249	crnkl1	88	85.246	ENSPSIG00000012705	CRNKL1	97	85.329	Pelodiscus_sinensis
ENSGAFG00000014249	crnkl1	90	84.862	ENSPMGG00000006263	crnkl1	95	85.842	Periophthalmus_magnuspinnatus
ENSGAFG00000014249	crnkl1	90	85.109	ENSPEMG00000000073	-	96	86.787	Peromyscus_maniculatus_bairdii
ENSGAFG00000014249	crnkl1	91	81.700	ENSPMAG00000002250	crnkl1	97	83.358	Petromyzon_marinus
ENSGAFG00000014249	crnkl1	91	83.262	ENSPCIG00000025825	CRNKL1	98	83.714	Phascolarctos_cinereus
ENSGAFG00000014249	crnkl1	97	97.581	ENSPFOG00000005102	crnkl1	100	97.581	Poecilia_formosa
ENSGAFG00000014249	crnkl1	99	97.477	ENSPLAG00000007288	crnkl1	98	97.477	Poecilia_latipinna
ENSGAFG00000014249	crnkl1	97	97.835	ENSPMEG00000008865	crnkl1	99	97.835	Poecilia_mexicana
ENSGAFG00000014249	crnkl1	97	95.867	ENSPREG00000012615	crnkl1	100	95.867	Poecilia_reticulata
ENSGAFG00000014249	crnkl1	89	84.412	ENSPPYG00000010747	CRNKL1	79	86.186	Pongo_abelii
ENSGAFG00000014249	crnkl1	89	79.971	ENSPCAG00000003296	CRNKL1	84	81.009	Procavia_capensis
ENSGAFG00000014249	crnkl1	89	83.529	ENSPCOG00000017608	CRNKL1	82	84.218	Propithecus_coquereli
ENSGAFG00000014249	crnkl1	93	80.939	ENSPVAG00000006207	CRNKL1	86	83.121	Pteropus_vampyrus
ENSGAFG00000014249	crnkl1	94	89.459	ENSPNYG00000001977	crnkl1	88	94.162	Pundamilia_nyererei
ENSGAFG00000014249	crnkl1	91	87.288	ENSPNAG00000001507	crnkl1	96	86.647	Pygocentrus_nattereri
ENSGAFG00000014249	crnkl1	90	85.109	ENSRNOG00000010587	Crnkl1	97	86.787	Rattus_norvegicus
ENSGAFG00000014249	crnkl1	90	84.964	ENSRNOG00000040045	Crnkl1	97	86.637	Rattus_norvegicus
ENSGAFG00000014249	crnkl1	91	84.180	ENSRBIG00000031770	CRNKL1	97	86.186	Rhinopithecus_bieti
ENSGAFG00000014249	crnkl1	91	84.035	ENSRROG00000040450	CRNKL1	97	86.036	Rhinopithecus_roxellana
ENSGAFG00000014249	crnkl1	85	36.957	YLR117C	CLF1	99	37.048	Saccharomyces_cerevisiae
ENSGAFG00000014249	crnkl1	91	84.470	ENSSBOG00000029672	CRNKL1	97	86.486	Saimiri_boliviensis_boliviensis
ENSGAFG00000014249	crnkl1	87	69.394	ENSSHAG00000011199	CRNKL1	99	69.394	Sarcophilus_harrisii
ENSGAFG00000014249	crnkl1	87	89.894	ENSSFOG00015000946	crnkl1	87	89.805	Scleropages_formosus
ENSGAFG00000014249	crnkl1	93	89.028	ENSSMAG00000007933	crnkl1	87	93.304	Scophthalmus_maximus
ENSGAFG00000014249	crnkl1	93	83.898	ENSSDUG00000012625	crnkl1	96	81.367	Seriola_dumerili
ENSGAFG00000014249	crnkl1	95	89.698	ENSSLDG00000021413	crnkl1	87	94.328	Seriola_lalandi_dorsalis
ENSGAFG00000014249	crnkl1	93	82.419	ENSSARG00000006443	CRNKL1	83	83.960	Sorex_araneus
ENSGAFG00000014249	crnkl1	90	85.673	ENSSPUG00000005254	CRNKL1	97	87.256	Sphenodon_punctatus
ENSGAFG00000014249	crnkl1	93	91.796	ENSSPAG00000016150	crnkl1	93	90.430	Stegastes_partitus
ENSGAFG00000014249	crnkl1	90	85.380	ENSSSCG00000038587	CRNKL1	96	87.237	Sus_scrofa
ENSGAFG00000014249	crnkl1	88	86.826	ENSTGUG00000007645	CRNKL1	96	86.716	Taeniopygia_guttata
ENSGAFG00000014249	crnkl1	88	85.395	ENSTRUG00000015417	crnkl1	89	85.544	Takifugu_rubripes
ENSGAFG00000014249	crnkl1	88	89.820	ENSTNIG00000010710	crnkl1	97	89.820	Tetraodon_nigroviridis
ENSGAFG00000014249	crnkl1	82	84.640	ENSTBEG00000001304	CRNKL1	82	84.762	Tupaia_belangeri
ENSGAFG00000014249	crnkl1	82	82.400	ENSTTRG00000000484	CRNKL1	82	81.144	Tursiops_truncatus
ENSGAFG00000014249	crnkl1	90	85.547	ENSUAMG00000018586	CRNKL1	97	87.237	Ursus_americanus
ENSGAFG00000014249	crnkl1	90	85.547	ENSUMAG00000024957	CRNKL1	97	87.237	Ursus_maritimus
ENSGAFG00000014249	crnkl1	88	86.119	ENSVVUG00000012559	CRNKL1	80	87.237	Vulpes_vulpes
ENSGAFG00000014249	crnkl1	89	85.882	ENSXETG00000009698	crnkl1	98	86.478	Xenopus_tropicalis
ENSGAFG00000014249	crnkl1	97	97.196	ENSXCOG00000000824	crnkl1	100	97.196	Xiphophorus_couchianus
ENSGAFG00000014249	crnkl1	97	97.995	ENSXMAG00000006896	crnkl1	100	97.995	Xiphophorus_maculatus