EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000014284 (Gene tree)
Gene ID: -
Gene Symbol: xrn2
Alias: wu:fb38g12|wu:fj53d06|zgc:55717
Full Name: 5'-3' exoribonuclease 2
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 12535 bases
Position: chrNHOQ01000884.1:168185-180719
Accession: ZDB-GENE-040426-2874
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021191	XRN_N	PF03159.18	2.4e-102	1	1
ENSGAFP00000021205	XRN_N	PF03159.18	3.1e-84	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000021390	-	3729	-	ENSGAFP00000021191	876 (aa)	-	-
ENSGAFT00000021404	-	1281	-	ENSGAFP00000021205	426 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014284's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014284	xrn2	98	73.721	ENSG00000088930	XRN2	89	73.721	Homo_sapiens
ENSGAFG00000014284	xrn2	99	87.687	ENSAPOG00000009818	xrn2	89	87.687	Acanthochromis_polyacanthus
ENSGAFG00000014284	xrn2	98	73.605	ENSAMEG00000012581	XRN2	89	73.605	Ailuropoda_melanoleuca
ENSGAFG00000014284	xrn2	99	81.900	ENSACIG00000015047	xrn2	95	87.429	Amphilophus_citrinellus
ENSGAFG00000014284	xrn2	99	88.377	ENSAOCG00000023632	xrn2	89	88.377	Amphiprion_ocellaris
ENSGAFG00000014284	xrn2	99	88.262	ENSAPEG00000014871	xrn2	89	88.262	Amphiprion_percula
ENSGAFG00000014284	xrn2	99	87.227	ENSATEG00000001273	xrn2	90	87.227	Anabas_testudineus
ENSGAFG00000014284	xrn2	96	73.547	ENSAPLG00000013869	XRN2	90	73.547	Anas_platyrhynchos
ENSGAFG00000014284	xrn2	99	73.744	ENSACAG00000005565	XRN2	90	73.913	Anolis_carolinensis
ENSGAFG00000014284	xrn2	98	73.605	ENSANAG00000020126	XRN2	89	73.605	Aotus_nancymaae
ENSGAFG00000014284	xrn2	99	85.780	ENSACLG00000010522	xrn2	98	85.780	Astatotilapia_calliptera
ENSGAFG00000014284	xrn2	98	82.699	ENSAMXG00000018301	xrn2	90	82.699	Astyanax_mexicanus
ENSGAFG00000014284	xrn2	98	73.256	ENSBTAG00000011304	XRN2	89	73.256	Bos_taurus
ENSGAFG00000014284	xrn2	93	61.111	WBGene00006964	xrn-2	89	53.165	Caenorhabditis_elegans
ENSGAFG00000014284	xrn2	98	73.372	ENSCJAG00000005611	XRN2	89	73.372	Callithrix_jacchus
ENSGAFG00000014284	xrn2	98	73.721	ENSCAFG00000005185	XRN2	89	73.721	Canis_familiaris
ENSGAFG00000014284	xrn2	98	73.721	ENSCAFG00020027479	XRN2	89	73.721	Canis_lupus_dingo
ENSGAFG00000014284	xrn2	98	73.372	ENSCHIG00000006921	XRN2	89	73.372	Capra_hircus
ENSGAFG00000014284	xrn2	98	73.605	ENSTSYG00000008315	XRN2	89	73.605	Carlito_syrichta
ENSGAFG00000014284	xrn2	95	63.517	ENSCAPG00000010773	XRN2	87	62.440	Cavia_aperea
ENSGAFG00000014284	xrn2	98	74.535	ENSCPOG00000009407	XRN2	89	74.535	Cavia_porcellus
ENSGAFG00000014284	xrn2	98	73.721	ENSCATG00000040350	XRN2	90	73.721	Cercocebus_atys
ENSGAFG00000014284	xrn2	98	74.070	ENSCLAG00000013419	XRN2	89	74.070	Chinchilla_lanigera
ENSGAFG00000014284	xrn2	98	73.721	ENSCSAG00000011094	XRN2	89	73.721	Chlorocebus_sabaeus
ENSGAFG00000014284	xrn2	67	87.097	ENSCHOG00000013404	XRN2	63	87.097	Choloepus_hoffmanni
ENSGAFG00000014284	xrn2	98	75.145	ENSCPBG00000023533	XRN2	89	75.145	Chrysemys_picta_bellii
ENSGAFG00000014284	xrn2	94	67.857	ENSCING00000022336	-	100	60.592	Ciona_intestinalis
ENSGAFG00000014284	xrn2	95	66.824	ENSCSAVG00000011217	-	91	71.325	Ciona_savignyi
ENSGAFG00000014284	xrn2	98	73.721	ENSCANG00000040240	XRN2	89	73.721	Colobus_angolensis_palliatus
ENSGAFG00000014284	xrn2	98	74.564	ENSCGRG00001010676	Xrn2	91	74.797	Cricetulus_griseus_chok1gshd
ENSGAFG00000014284	xrn2	95	73.533	ENSCGRG00000006378	Xrn2	89	73.772	Cricetulus_griseus_crigri
ENSGAFG00000014284	xrn2	92	78.832	ENSCSEG00000005628	xrn2	100	79.423	Cynoglossus_semilaevis
ENSGAFG00000014284	xrn2	99	88.335	ENSCVAG00000018999	xrn2	98	94.264	Cyprinodon_variegatus
ENSGAFG00000014284	xrn2	98	81.588	ENSDARG00000101900	xrn2	96	85.086	Danio_rerio
ENSGAFG00000014284	xrn2	98	73.721	ENSDNOG00000001895	XRN2	89	73.721	Dasypus_novemcinctus
ENSGAFG00000014284	xrn2	92	78.832	ENSDORG00000005434	Xrn2	89	72.674	Dipodomys_ordii
ENSGAFG00000014284	xrn2	93	65.714	FBgn0031868	Rat1	92	53.776	Drosophila_melanogaster
ENSGAFG00000014284	xrn2	92	73.966	ENSETEG00000001740	XRN2	82	79.319	Echinops_telfairi
ENSGAFG00000014284	xrn2	94	75.238	ENSEBUG00000016136	xrn2	100	69.016	Eptatretus_burgeri
ENSGAFG00000014284	xrn2	98	73.733	ENSEASG00005002484	XRN2	90	73.733	Equus_asinus_asinus
ENSGAFG00000014284	xrn2	92	92.308	ENSECAG00000018988	XRN2	86	92.308	Equus_caballus
ENSGAFG00000014284	xrn2	73	96.000	ENSEEUG00000009265	XRN2	67	96.000	Erinaceus_europaeus
ENSGAFG00000014284	xrn2	99	83.812	ENSELUG00000000552	xrn2	88	83.812	Esox_lucius
ENSGAFG00000014284	xrn2	98	73.372	ENSFCAG00000007970	XRN2	89	73.372	Felis_catus
ENSGAFG00000014284	xrn2	99	74.164	ENSFALG00000004508	XRN2	90	74.164	Ficedula_albicollis
ENSGAFG00000014284	xrn2	98	73.953	ENSFDAG00000016311	XRN2	89	73.953	Fukomys_damarensis
ENSGAFG00000014284	xrn2	92	88.665	ENSFHEG00000013039	xrn2	98	86.015	Fundulus_heteroclitus
ENSGAFG00000014284	xrn2	92	84.672	ENSGMOG00000013436	xrn2	100	80.168	Gadus_morhua
ENSGAFG00000014284	xrn2	99	73.479	ENSGALG00000008372	XRN2	90	73.479	Gallus_gallus
ENSGAFG00000014284	xrn2	92	85.645	ENSGACG00000011870	xrn2	96	86.756	Gasterosteus_aculeatus
ENSGAFG00000014284	xrn2	98	74.797	ENSGAGG00000004884	XRN2	89	74.797	Gopherus_agassizii
ENSGAFG00000014284	xrn2	98	73.721	ENSGGOG00000013738	XRN2	89	73.721	Gorilla_gorilla
ENSGAFG00000014284	xrn2	92	84.672	ENSHBUG00000005077	xrn2	94	87.548	Haplochromis_burtoni
ENSGAFG00000014284	xrn2	95	77.305	ENSHGLG00000014831	XRN2	89	72.907	Heterocephalus_glaber_female
ENSGAFG00000014284	xrn2	95	77.305	ENSHGLG00100013130	XRN2	89	72.907	Heterocephalus_glaber_male
ENSGAFG00000014284	xrn2	99	84.943	ENSHCOG00000011994	xrn2	94	81.537	Hippocampus_comes
ENSGAFG00000014284	xrn2	99	81.278	ENSIPUG00000006639	xrn2	92	81.278	Ictalurus_punctatus
ENSGAFG00000014284	xrn2	98	73.953	ENSSTOG00000000589	XRN2	89	73.953	Ictidomys_tridecemlineatus
ENSGAFG00000014284	xrn2	98	74.535	ENSJJAG00000022128	Xrn2	89	74.535	Jaculus_jaculus
ENSGAFG00000014284	xrn2	92	87.105	ENSLBEG00000010041	xrn2	100	88.676	Labrus_bergylta
ENSGAFG00000014284	xrn2	95	75.682	ENSLACG00000008307	XRN2	97	76.108	Latimeria_chalumnae
ENSGAFG00000014284	xrn2	92	85.645	ENSLOCG00000016874	xrn2	93	80.353	Lepisosteus_oculatus
ENSGAFG00000014284	xrn2	98	74.070	ENSLAFG00000014624	XRN2	89	74.070	Loxodonta_africana
ENSGAFG00000014284	xrn2	98	73.721	ENSMFAG00000038122	XRN2	89	73.721	Macaca_fascicularis
ENSGAFG00000014284	xrn2	98	73.721	ENSMMUG00000011405	XRN2	89	73.721	Macaca_mulatta
ENSGAFG00000014284	xrn2	98	73.488	ENSMNEG00000040626	XRN2	89	73.605	Macaca_nemestrina
ENSGAFG00000014284	xrn2	98	73.605	ENSMLEG00000041897	XRN2	89	73.605	Mandrillus_leucophaeus
ENSGAFG00000014284	xrn2	99	88.377	ENSMAMG00000008633	xrn2	90	88.377	Mastacembelus_armatus
ENSGAFG00000014284	xrn2	99	87.729	ENSMZEG00005022362	xrn2	98	87.729	Maylandia_zebra
ENSGAFG00000014284	xrn2	99	73.029	ENSMGAG00000003196	XRN2	90	73.029	Meleagris_gallopavo
ENSGAFG00000014284	xrn2	98	74.681	ENSMAUG00000021842	Xrn2	89	74.681	Mesocricetus_auratus
ENSGAFG00000014284	xrn2	98	73.488	ENSMICG00000008126	XRN2	89	73.488	Microcebus_murinus
ENSGAFG00000014284	xrn2	98	74.070	ENSMOCG00000012588	Xrn2	89	74.302	Microtus_ochrogaster
ENSGAFG00000014284	xrn2	99	85.164	ENSMMOG00000017576	xrn2	96	86.450	Mola_mola
ENSGAFG00000014284	xrn2	98	74.476	ENSMODG00000006163	XRN2	89	74.476	Monodelphis_domestica
ENSGAFG00000014284	xrn2	99	86.348	ENSMALG00000011355	xrn2	95	91.363	Monopterus_albus
ENSGAFG00000014284	xrn2	98	74.126	MGP_CAROLIEiJ_G0024400	Xrn2	89	74.126	Mus_caroli
ENSGAFG00000014284	xrn2	98	74.302	ENSMUSG00000027433	Xrn2	89	74.302	Mus_musculus
ENSGAFG00000014284	xrn2	98	74.186	MGP_PahariEiJ_G0025843	Xrn2	89	74.186	Mus_pahari
ENSGAFG00000014284	xrn2	98	74.302	MGP_SPRETEiJ_G0025318	Xrn2	94	84.034	Mus_spretus
ENSGAFG00000014284	xrn2	92	78.832	ENSMPUG00000001198	XRN2	83	72.292	Mustela_putorius_furo
ENSGAFG00000014284	xrn2	98	73.574	ENSMLUG00000001536	XRN2	89	73.574	Myotis_lucifugus
ENSGAFG00000014284	xrn2	98	74.419	ENSNGAG00000018138	Xrn2	89	74.419	Nannospalax_galili
ENSGAFG00000014284	xrn2	99	87.729	ENSNBRG00000008062	xrn2	98	87.729	Neolamprologus_brichardi
ENSGAFG00000014284	xrn2	98	73.721	ENSNLEG00000009991	XRN2	89	73.721	Nomascus_leucogenys
ENSGAFG00000014284	xrn2	81	59.167	ENSMEUG00000008622	-	53	82.222	Notamacropus_eugenii
ENSGAFG00000014284	xrn2	67	72.105	ENSOPRG00000001397	-	63	72.105	Ochotona_princeps
ENSGAFG00000014284	xrn2	96	68.241	ENSODEG00000000860	-	91	67.769	Octodon_degus
ENSGAFG00000014284	xrn2	98	73.837	ENSODEG00000010745	-	89	73.837	Octodon_degus
ENSGAFG00000014284	xrn2	99	87.572	ENSONIG00000018720	xrn2	89	85.780	Oreochromis_niloticus
ENSGAFG00000014284	xrn2	98	74.535	ENSOANG00000015673	XRN2	89	74.535	Ornithorhynchus_anatinus
ENSGAFG00000014284	xrn2	98	74.302	ENSOCUG00000013468	XRN2	89	74.302	Oryctolagus_cuniculus
ENSGAFG00000014284	xrn2	99	86.682	ENSORLG00000017213	xrn2	98	86.682	Oryzias_latipes
ENSGAFG00000014284	xrn2	99	86.651	ENSORLG00020001824	xrn2	90	86.651	Oryzias_latipes_hni
ENSGAFG00000014284	xrn2	99	86.191	ENSORLG00015019747	xrn2	90	86.191	Oryzias_latipes_hsok
ENSGAFG00000014284	xrn2	99	86.191	ENSOMEG00000019820	xrn2	89	86.191	Oryzias_melastigma
ENSGAFG00000014284	xrn2	98	73.812	ENSOGAG00000001068	XRN2	89	73.812	Otolemur_garnettii
ENSGAFG00000014284	xrn2	95	72.662	ENSOARG00000004443	XRN2	89	72.662	Ovis_aries
ENSGAFG00000014284	xrn2	98	73.721	ENSPPAG00000033549	XRN2	89	73.721	Pan_paniscus
ENSGAFG00000014284	xrn2	98	73.372	ENSPPRG00000008732	XRN2	89	73.372	Panthera_pardus
ENSGAFG00000014284	xrn2	95	72.782	ENSPTIG00000015683	XRN2	87	72.782	Panthera_tigris_altaica
ENSGAFG00000014284	xrn2	98	73.721	ENSPTRG00000013308	XRN2	89	73.721	Pan_troglodytes
ENSGAFG00000014284	xrn2	98	73.721	ENSPANG00000018088	XRN2	89	73.721	Papio_anubis
ENSGAFG00000014284	xrn2	98	81.998	ENSPKIG00000016889	xrn2	89	81.808	Paramormyrops_kingsleyae
ENSGAFG00000014284	xrn2	88	76.221	ENSPSIG00000014666	XRN2	100	76.221	Pelodiscus_sinensis
ENSGAFG00000014284	xrn2	98	74.302	ENSPEMG00000000111	Xrn2	89	74.302	Peromyscus_maniculatus_bairdii
ENSGAFG00000014284	xrn2	59	73.333	ENSPMAG00000002576	xrn2	99	72.941	Petromyzon_marinus
ENSGAFG00000014284	xrn2	99	98.387	ENSPFOG00000004182	xrn2	90	98.387	Poecilia_formosa
ENSGAFG00000014284	xrn2	100	98.402	ENSPLAG00000007351	xrn2	98	98.402	Poecilia_latipinna
ENSGAFG00000014284	xrn2	93	98.034	ENSPMEG00000011798	xrn2	89	98.034	Poecilia_mexicana
ENSGAFG00000014284	xrn2	99	97.581	ENSPREG00000012452	xrn2	97	97.581	Poecilia_reticulata
ENSGAFG00000014284	xrn2	98	73.372	ENSPPYG00000010755	XRN2	89	73.372	Pongo_abelii
ENSGAFG00000014284	xrn2	92	78.345	ENSPCAG00000011191	XRN2	89	69.374	Procavia_capensis
ENSGAFG00000014284	xrn2	92	76.845	ENSPCOG00000016468	XRN2	88	67.093	Propithecus_coquereli
ENSGAFG00000014284	xrn2	92	65.693	ENSPVAG00000004596	XRN2	82	64.317	Pteropus_vampyrus
ENSGAFG00000014284	xrn2	99	85.780	ENSPNYG00000001765	xrn2	98	85.780	Pundamilia_nyererei
ENSGAFG00000014284	xrn2	98	81.724	ENSPNAG00000010956	xrn2	89	81.724	Pygocentrus_nattereri
ENSGAFG00000014284	xrn2	98	75.000	ENSRNOG00000011785	Xrn2	89	75.000	Rattus_norvegicus
ENSGAFG00000014284	xrn2	92	78.345	ENSRBIG00000036193	XRN2	100	74.699	Rhinopithecus_bieti
ENSGAFG00000014284	xrn2	98	73.721	ENSRROG00000044400	XRN2	81	73.721	Rhinopithecus_roxellana
ENSGAFG00000014284	xrn2	94	48.706	YOR048C	RAT1	63	53.511	Saccharomyces_cerevisiae
ENSGAFG00000014284	xrn2	98	73.605	ENSSBOG00000021014	XRN2	89	73.605	Saimiri_boliviensis_boliviensis
ENSGAFG00000014284	xrn2	98	82.944	ENSSFOG00015001091	xrn2	89	82.944	Scleropages_formosus
ENSGAFG00000014284	xrn2	99	86.782	ENSSMAG00000007834	xrn2	88	86.782	Scophthalmus_maximus
ENSGAFG00000014284	xrn2	98	86.860	ENSSDUG00000012802	xrn2	99	85.666	Seriola_dumerili
ENSGAFG00000014284	xrn2	99	87.802	ENSSLDG00000021273	xrn2	98	87.802	Seriola_lalandi_dorsalis
ENSGAFG00000014284	xrn2	60	96.000	ENSSARG00000005859	-	56	96.000	Sorex_araneus
ENSGAFG00000014284	xrn2	92	80.049	ENSSPUG00000005485	XRN2	88	72.769	Sphenodon_punctatus
ENSGAFG00000014284	xrn2	99	87.572	ENSSPAG00000016027	xrn2	89	87.572	Stegastes_partitus
ENSGAFG00000014284	xrn2	92	78.832	ENSSSCG00000007109	XRN2	89	72.093	Sus_scrofa
ENSGAFG00000014284	xrn2	99	72.727	ENSTGUG00000007535	XRN2	90	72.727	Taeniopygia_guttata
ENSGAFG00000014284	xrn2	99	83.793	ENSTRUG00000015489	xrn2	88	83.793	Takifugu_rubripes
ENSGAFG00000014284	xrn2	99	82.648	ENSTNIG00000010712	xrn2	90	82.648	Tetraodon_nigroviridis
ENSGAFG00000014284	xrn2	98	73.953	ENSTBEG00000004119	XRN2	89	73.953	Tupaia_belangeri
ENSGAFG00000014284	xrn2	92	78.345	ENSTTRG00000009087	XRN2	82	76.720	Tursiops_truncatus
ENSGAFG00000014284	xrn2	99	74.661	ENSUAMG00000024634	XRN2	92	72.326	Ursus_americanus
ENSGAFG00000014284	xrn2	95	73.141	ENSUMAG00000004012	XRN2	84	73.141	Ursus_maritimus
ENSGAFG00000014284	xrn2	77	81.553	ENSVPAG00000010694	XRN2	73	81.553	Vicugna_pacos
ENSGAFG00000014284	xrn2	98	73.605	ENSVVUG00000012178	XRN2	89	73.605	Vulpes_vulpes
ENSGAFG00000014284	xrn2	92	81.995	ENSXETG00000023501	xrn2	91	75.691	Xenopus_tropicalis
ENSGAFG00000014284	xrn2	99	98.733	ENSXMAG00000000242	xrn2	100	96.305	Xiphophorus_maculatus