EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014303 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5261 bases
Position: chrNHOQ01002686.1:877998-883258
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021215	zf-C2H2	PF00096.26	9e-17	1	3
ENSGAFP00000021215	zf-C2H2	PF00096.26	9e-17	2	3
ENSGAFP00000021215	zf-C2H2	PF00096.26	9e-17	3	3
ENSGAFP00000021215	zf-met	PF12874.7	0.00038	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000021414	-	1757	-	ENSGAFP00000021215	323 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014303's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014303's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014303	-	50	40.179	ENSGAFG00000002659	-	69	40.179
ENSGAFG00000014303	-	58	39.759	ENSGAFG00000012934	-	73	39.759
ENSGAFG00000014303	-	60	43.925	ENSGAFG00000013677	-	85	45.794
ENSGAFG00000014303	-	52	44.340	ENSGAFG00000007104	-	60	44.340
ENSGAFG00000014303	-	57	42.056	ENSGAFG00000016322	-	62	42.056
ENSGAFG00000014303	-	55	44.330	ENSGAFG00000013491	-	68	44.330
ENSGAFG00000014303	-	52	42.857	ENSGAFG00000011913	si:ch211-161m3.4	78	42.857
ENSGAFG00000014303	-	57	42.574	ENSGAFG00000013069	-	63	42.574
ENSGAFG00000014303	-	59	44.231	ENSGAFG00000013624	-	52	44.231
ENSGAFG00000014303	-	58	41.379	ENSGAFG00000020503	-	50	41.379
ENSGAFG00000014303	-	55	44.304	ENSGAFG00000020501	-	67	44.304
ENSGAFG00000014303	-	81	45.679	ENSGAFG00000020505	-	69	45.679
ENSGAFG00000014303	-	71	44.643	ENSGAFG00000013363	-	77	44.643
ENSGAFG00000014303	-	55	44.037	ENSGAFG00000011999	-	85	44.037
ENSGAFG00000014303	-	54	43.860	ENSGAFG00000017761	-	83	43.860
ENSGAFG00000014303	-	57	40.833	ENSGAFG00000011287	-	51	40.833
ENSGAFG00000014303	-	66	49.107	ENSGAFG00000011288	-	80	49.107
ENSGAFG00000014303	-	61	44.086	ENSGAFG00000011326	-	94	44.086
ENSGAFG00000014303	-	54	45.545	ENSGAFG00000020499	-	60	45.545
ENSGAFG00000014303	-	58	42.202	ENSGAFG00000011944	-	58	42.202
ENSGAFG00000014303	-	66	39.394	ENSGAFG00000014188	-	96	42.453
ENSGAFG00000014303	-	52	50.000	ENSGAFG00000013969	-	92	50.000
ENSGAFG00000014303	-	69	47.561	ENSGAFG00000018302	-	92	47.561
ENSGAFG00000014303	-	68	41.509	ENSGAFG00000013000	-	84	41.818
ENSGAFG00000014303	-	93	47.674	ENSGAFG00000014369	-	94	46.429
ENSGAFG00000014303	-	57	41.071	ENSGAFG00000018422	-	50	41.071
ENSGAFG00000014303	-	51	41.071	ENSGAFG00000014413	-	73	42.056
ENSGAFG00000014303	-	59	37.209	ENSGAFG00000016347	znf668	79	37.209
ENSGAFG00000014303	-	57	39.773	ENSGAFG00000012977	-	86	39.773
ENSGAFG00000014303	-	51	41.964	ENSGAFG00000013605	-	97	41.964
ENSGAFG00000014303	-	58	45.283	ENSGAFG00000016595	-	83	45.283
ENSGAFG00000014303	-	61	40.323	ENSGAFG00000013055	-	66	40.323
ENSGAFG00000014303	-	56	44.340	ENSGAFG00000013934	-	98	43.860
ENSGAFG00000014303	-	55	40.566	ENSGAFG00000013452	-	67	40.566
ENSGAFG00000014303	-	52	46.835	ENSGAFG00000013396	-	77	46.835
ENSGAFG00000014303	-	53	43.396	ENSGAFG00000021140	-	99	43.396
ENSGAFG00000014303	-	55	40.870	ENSGAFG00000010637	-	95	40.870
ENSGAFG00000014303	-	52	46.341	ENSGAFG00000001879	-	61	46.341
ENSGAFG00000014303	-	69	41.228	ENSGAFG00000003108	-	77	41.228
ENSGAFG00000014303	-	55	42.975	ENSGAFG00000018820	-	72	42.975
ENSGAFG00000014303	-	52	45.455	ENSGAFG00000012035	-	82	45.455
ENSGAFG00000014303	-	52	45.977	ENSGAFG00000011965	-	75	43.363
ENSGAFG00000014303	-	61	42.400	ENSGAFG00000018645	-	74	42.400
ENSGAFG00000014303	-	54	44.828	ENSGAFG00000013438	-	89	42.857
ENSGAFG00000014303	-	54	40.566	ENSGAFG00000013420	-	68	40.566
ENSGAFG00000014303	-	52	41.509	ENSGAFG00000013911	-	96	41.509
ENSGAFG00000014303	-	62	44.643	ENSGAFG00000008226	-	72	44.643
ENSGAFG00000014303	-	56	46.000	ENSGAFG00000021132	-	58	46.000
ENSGAFG00000014303	-	54	44.643	ENSGAFG00000021131	-	79	44.643
ENSGAFG00000014303	-	68	37.736	ENSGAFG00000011906	-	67	37.736
ENSGAFG00000014303	-	55	44.340	ENSGAFG00000012069	-	87	45.312
ENSGAFG00000014303	-	54	41.250	ENSGAFG00000005321	zbtb47b	71	41.250
ENSGAFG00000014303	-	59	44.318	ENSGAFG00000011884	-	94	42.241
ENSGAFG00000014303	-	55	44.048	ENSGAFG00000011290	-	50	44.048
ENSGAFG00000014303	-	82	47.170	ENSGAFG00000001481	-	86	47.170
ENSGAFG00000014303	-	55	44.554	ENSGAFG00000008274	-	95	44.554
ENSGAFG00000014303	-	52	44.954	ENSGAFG00000008231	-	68	44.954

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014303	-	89	52.215	ENSAMXG00000015228	-	96	52.215	Astyanax_mexicanus
ENSGAFG00000014303	-	89	38.973	ENSAMXG00000006669	GFI1	99	38.973	Astyanax_mexicanus
ENSGAFG00000014303	-	89	43.275	ENSELUG00000006948	-	99	44.575	Esox_lucius
ENSGAFG00000014303	-	89	40.606	ENSHCOG00000019555	GFI1	100	40.606	Hippocampus_comes
ENSGAFG00000014303	-	89	51.466	ENSIPUG00000021407	-	96	51.792	Ictalurus_punctatus
ENSGAFG00000014303	-	89	40.533	ENSLACG00000017590	-	99	39.466	Latimeria_chalumnae
ENSGAFG00000014303	-	65	53.052	ENSMODG00000011802	GFI1	50	52.018	Monodelphis_domestica
ENSGAFG00000014303	-	89	42.643	ENSPLAG00000010879	gfi1ab	100	80.702	Poecilia_latipinna
ENSGAFG00000014303	-	89	42.598	ENSPREG00000007997	GFI1	100	42.598	Poecilia_reticulata
ENSGAFG00000014303	-	89	53.896	ENSPNAG00000014299	-	98	53.896	Pygocentrus_nattereri
ENSGAFG00000014303	-	91	47.432	ENSSFOG00015008114	-	99	47.748	Scleropages_formosus
ENSGAFG00000014303	-	91	63.051	ENSSMAG00000002798	-	99	63.051	Scophthalmus_maximus
ENSGAFG00000014303	-	89	42.368	ENSSPAG00000009140	gfi1ab	100	42.368	Stegastes_partitus