EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014563 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 6223 bases
Position: chrNHOQ01000885.1:378087-384309
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021622	zf-C2H2	PF00096.26	3.2e-28	1	5
ENSGAFP00000021622	zf-C2H2	PF00096.26	3.2e-28	2	5
ENSGAFP00000021622	zf-C2H2	PF00096.26	3.2e-28	3	5
ENSGAFP00000021622	zf-C2H2	PF00096.26	3.2e-28	4	5
ENSGAFP00000021622	zf-C2H2	PF00096.26	3.2e-28	5	5
ENSGAFP00000021622	zf-met	PF12874.7	5.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000021823	-	3685	-	ENSGAFP00000021622	326 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014563's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014563's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014563	-	91	46.586	ENSGAFG00000016595	-	98	47.107
ENSGAFG00000014563	-	57	48.246	ENSGAFG00000013605	-	96	48.246
ENSGAFG00000014563	-	90	48.630	ENSGAFG00000013363	-	97	48.630
ENSGAFG00000014563	-	58	41.791	ENSGAFG00000005337	-	95	46.364
ENSGAFG00000014563	-	54	50.000	ENSGAFG00000000037	-	62	50.602
ENSGAFG00000014563	-	85	40.833	ENSGAFG00000018663	-	91	40.659
ENSGAFG00000014563	-	73	49.153	ENSGAFG00000017066	-	58	49.153
ENSGAFG00000014563	-	90	45.890	ENSGAFG00000013677	-	99	43.787
ENSGAFG00000014563	-	53	47.701	ENSGAFG00000021139	-	86	47.701
ENSGAFG00000014563	-	95	41.935	ENSGAFG00000013055	-	97	44.706
ENSGAFG00000014563	-	91	46.000	ENSGAFG00000013019	-	97	41.341
ENSGAFG00000014563	-	52	43.860	ENSGAFG00000012945	-	56	43.860
ENSGAFG00000014563	-	94	47.826	ENSGAFG00000012004	-	84	47.826
ENSGAFG00000014563	-	75	47.514	ENSGAFG00000011924	-	88	47.514
ENSGAFG00000014563	-	92	50.867	ENSGAFG00000019072	-	92	53.020
ENSGAFG00000014563	-	66	50.000	ENSGAFG00000013366	-	52	50.000
ENSGAFG00000014563	-	99	41.525	ENSGAFG00000007110	-	97	41.525
ENSGAFG00000014563	-	70	46.108	ENSGAFG00000016093	-	70	46.108
ENSGAFG00000014563	-	98	49.206	ENSGAFG00000013116	-	98	49.206
ENSGAFG00000014563	-	81	52.830	ENSGAFG00000012767	-	89	51.149
ENSGAFG00000014563	-	70	49.102	ENSGAFG00000014413	-	91	49.102
ENSGAFG00000014563	-	54	45.833	ENSGAFG00000013616	-	71	45.833
ENSGAFG00000014563	-	80	44.379	ENSGAFG00000014088	-	89	44.379
ENSGAFG00000014563	-	91	44.828	ENSGAFG00000014085	-	86	44.828
ENSGAFG00000014563	-	58	33.000	ENSGAFG00000013839	-	56	31.455
ENSGAFG00000014563	-	79	43.023	ENSGAFG00000016322	-	69	43.023
ENSGAFG00000014563	-	65	50.595	ENSGAFG00000007098	-	99	50.289
ENSGAFG00000014563	-	68	47.619	ENSGAFG00000013491	-	81	47.619
ENSGAFG00000014563	-	54	45.562	ENSGAFG00000011913	si:ch211-161m3.4	72	45.562
ENSGAFG00000014563	-	57	50.000	ENSGAFG00000016587	-	89	50.000
ENSGAFG00000014563	-	95	44.444	ENSGAFG00000013069	-	96	39.860
ENSGAFG00000014563	-	80	44.706	ENSGAFG00000013066	-	95	44.706
ENSGAFG00000014563	-	94	47.701	ENSGAFG00000007104	-	89	47.701
ENSGAFG00000014563	-	92	46.479	ENSGAFG00000020501	-	74	46.479
ENSGAFG00000014563	-	94	51.064	ENSGAFG00000011944	-	88	51.064
ENSGAFG00000014563	-	72	46.667	ENSGAFG00000001156	-	78	46.667
ENSGAFG00000014563	-	95	44.379	ENSGAFG00000013048	-	98	45.181
ENSGAFG00000014563	-	72	39.130	ENSGAFG00000000521	-	90	39.130
ENSGAFG00000014563	-	78	49.112	ENSGAFG00000011999	-	96	50.296
ENSGAFG00000014563	-	94	43.182	ENSGAFG00000011998	-	68	32.042
ENSGAFG00000014563	-	52	44.444	ENSGAFG00000011287	-	52	44.444
ENSGAFG00000014563	-	99	46.784	ENSGAFG00000011288	-	99	46.784
ENSGAFG00000014563	-	75	42.857	ENSGAFG00000013462	-	87	42.857
ENSGAFG00000014563	-	52	42.609	ENSGAFG00000007532	-	74	42.609
ENSGAFG00000014563	-	99	46.610	ENSGAFG00000010983	-	90	46.610
ENSGAFG00000014563	-	97	47.887	ENSGAFG00000011326	-	99	50.296
ENSGAFG00000014563	-	52	41.916	ENSGAFG00000011290	-	93	41.916
ENSGAFG00000014563	-	54	44.848	ENSGAFG00000012953	-	78	44.848
ENSGAFG00000014563	-	92	49.383	ENSGAFG00000011940	-	98	49.383
ENSGAFG00000014563	-	99	37.464	ENSGAFG00000018422	-	86	37.464
ENSGAFG00000014563	-	61	46.429	ENSGAFG00000017761	-	89	46.429
ENSGAFG00000014563	-	94	49.624	ENSGAFG00000014419	-	93	49.624
ENSGAFG00000014563	-	54	44.578	ENSGAFG00000014410	-	84	44.578
ENSGAFG00000014563	-	75	51.724	ENSGAFG00000021131	-	92	51.724
ENSGAFG00000014563	-	74	51.948	ENSGAFG00000021132	-	72	51.948
ENSGAFG00000014563	-	99	48.630	ENSGAFG00000012054	-	88	48.630
ENSGAFG00000014563	-	54	46.512	ENSGAFG00000016347	znf668	75	46.512
ENSGAFG00000014563	-	59	41.975	ENSGAFG00000013430	-	79	41.975
ENSGAFG00000014563	-	53	42.069	ENSGAFG00000013438	-	85	42.754
ENSGAFG00000014563	-	55	45.455	ENSGAFG00000013006	-	98	45.455
ENSGAFG00000014563	-	76	42.657	ENSGAFG00000013000	-	96	42.177
ENSGAFG00000014563	-	53	44.444	ENSGAFG00000012977	-	86	44.444
ENSGAFG00000014563	-	91	47.586	ENSGAFG00000020503	-	83	45.304
ENSGAFG00000014563	-	77	40.187	ENSGAFG00000020507	-	70	40.187
ENSGAFG00000014563	-	90	46.746	ENSGAFG00000020505	-	58	51.351
ENSGAFG00000014563	-	87	49.112	ENSGAFG00000008231	-	94	49.112
ENSGAFG00000014563	-	97	50.000	ENSGAFG00000010524	-	82	50.000
ENSGAFG00000014563	-	70	46.746	ENSGAFG00000013911	-	97	46.746
ENSGAFG00000014563	-	91	44.970	ENSGAFG00000014097	-	91	44.970
ENSGAFG00000014563	-	76	43.017	ENSGAFG00000013408	-	92	44.643
ENSGAFG00000014563	-	91	41.530	ENSGAFG00000011884	-	98	50.568
ENSGAFG00000014563	-	53	50.340	ENSGAFG00000011965	-	86	50.000
ENSGAFG00000014563	-	56	41.520	ENSGAFG00000012987	-	90	41.520
ENSGAFG00000014563	-	97	48.993	ENSGAFG00000008204	-	84	48.993
ENSGAFG00000014563	-	50	46.043	ENSGAFG00000011278	-	87	46.043
ENSGAFG00000014563	-	95	49.425	ENSGAFG00000016976	-	99	49.425
ENSGAFG00000014563	-	54	38.182	ENSGAFG00000021891	znf319b	81	36.735
ENSGAFG00000014563	-	64	42.500	ENSGAFG00000021126	-	54	42.500
ENSGAFG00000014563	-	61	42.105	ENSGAFG00000019233	prdm5	67	42.105
ENSGAFG00000014563	-	91	47.337	ENSGAFG00000013452	-	99	47.337
ENSGAFG00000014563	-	53	50.888	ENSGAFG00000021140	-	99	50.888
ENSGAFG00000014563	-	73	45.872	ENSGAFG00000021143	-	92	39.062
ENSGAFG00000014563	-	53	44.048	ENSGAFG00000013053	-	50	44.048
ENSGAFG00000014563	-	55	42.537	ENSGAFG00000002659	-	67	43.195
ENSGAFG00000014563	-	69	47.059	ENSGAFG00000010637	-	85	47.059
ENSGAFG00000014563	-	91	42.604	ENSGAFG00000013457	-	95	42.604
ENSGAFG00000014563	-	54	44.295	ENSGAFG00000012733	-	98	44.295
ENSGAFG00000014563	-	56	45.690	ENSGAFG00000003108	-	79	45.690
ENSGAFG00000014563	-	94	50.704	ENSGAFG00000008226	-	90	50.704
ENSGAFG00000014563	-	81	42.778	ENSGAFG00000013969	-	98	42.778
ENSGAFG00000014563	-	56	47.929	ENSGAFG00000014362	-	57	47.929
ENSGAFG00000014563	-	90	48.810	ENSGAFG00000014369	-	98	46.471
ENSGAFG00000014563	-	65	34.595	ENSGAFG00000016981	-	84	34.595
ENSGAFG00000014563	-	75	51.678	ENSGAFG00000012035	-	96	50.000
ENSGAFG00000014563	-	79	46.789	ENSGAFG00000001879	-	98	46.789
ENSGAFG00000014563	-	97	51.282	ENSGAFG00000013934	-	98	48.824
ENSGAFG00000014563	-	61	44.390	ENSGAFG00000020509	-	88	44.390
ENSGAFG00000014563	-	68	47.260	ENSGAFG00000011174	-	78	47.260
ENSGAFG00000014563	-	53	42.958	ENSGAFG00000000266	-	74	42.958
ENSGAFG00000014563	-	91	41.036	ENSGAFG00000014188	-	99	45.395
ENSGAFG00000014563	-	50	37.069	ENSGAFG00000003093	scrt2	67	37.069
ENSGAFG00000014563	-	58	43.571	ENSGAFG00000018659	-	99	43.571
ENSGAFG00000014563	-	53	47.953	ENSGAFG00000018645	-	95	47.953
ENSGAFG00000014563	-	90	51.553	ENSGAFG00000012069	-	98	51.553
ENSGAFG00000014563	-	99	44.828	ENSGAFG00000013420	-	92	44.828
ENSGAFG00000014563	-	53	45.614	ENSGAFG00000007636	scrt1b	50	45.614
ENSGAFG00000014563	-	67	48.673	ENSGAFG00000003150	-	100	43.103
ENSGAFG00000014563	-	72	33.600	ENSGAFG00000020131	znf341	53	34.513
ENSGAFG00000014563	-	75	45.562	ENSGAFG00000011906	-	75	45.562
ENSGAFG00000014563	-	60	33.520	ENSGAFG00000003119	-	67	33.333
ENSGAFG00000014563	-	52	48.148	ENSGAFG00000005321	zbtb47b	79	48.148
ENSGAFG00000014563	-	56	44.444	ENSGAFG00000003059	gfi1b	85	44.444
ENSGAFG00000014563	-	66	45.029	ENSGAFG00000012934	-	80	45.029
ENSGAFG00000014563	-	100	47.531	ENSGAFG00000018302	-	100	47.531
ENSGAFG00000014563	-	54	43.678	ENSGAFG00000013390	-	64	43.678
ENSGAFG00000014563	-	91	43.195	ENSGAFG00000013471	-	89	43.195
ENSGAFG00000014563	-	91	44.444	ENSGAFG00000011938	-	92	46.821
ENSGAFG00000014563	-	75	47.518	ENSGAFG00000018820	-	89	44.271
ENSGAFG00000014563	-	76	45.455	ENSGAFG00000013624	-	91	43.976
ENSGAFG00000014563	-	70	46.067	ENSGAFG00000001481	-	85	46.067
ENSGAFG00000014563	-	68	45.872	ENSGAFG00000008274	-	99	47.260
ENSGAFG00000014563	-	90	48.175	ENSGAFG00000020499	-	91	48.175
ENSGAFG00000014563	-	53	40.000	ENSGAFG00000008457	zbtb41	61	40.000
ENSGAFG00000014563	-	52	37.615	ENSGAFG00000021427	snai2	91	35.366
ENSGAFG00000014563	-	91	46.746	ENSGAFG00000013396	-	97	46.746
ENSGAFG00000014563	-	74	46.108	ENSGAFG00000001402	-	96	46.386

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014563	-	58	46.429	ENSEBUG00000012314	-	64	46.429	Eptatretus_burgeri
ENSGAFG00000014563	-	52	49.112	ENSEBUG00000010204	-	55	49.112	Eptatretus_burgeri
ENSGAFG00000014563	-	58	44.681	ENSEBUG00000014042	-	56	44.681	Eptatretus_burgeri
ENSGAFG00000014563	-	52	42.012	ENSEBUG00000011730	-	50	42.012	Eptatretus_burgeri
ENSGAFG00000014563	-	68	53.939	ENSHBUG00000009941	-	81	53.939	Haplochromis_burtoni
ENSGAFG00000014563	-	58	50.833	ENSKMAG00000019180	-	67	50.833	Kryptolebias_marmoratus
ENSGAFG00000014563	-	52	50.000	ENSLOCG00000018285	-	100	50.000	Lepisosteus_oculatus
ENSGAFG00000014563	-	50	47.959	ENSMMOG00000011435	-	92	47.959	Mola_mola
ENSGAFG00000014563	-	63	49.505	ENSORLG00000028457	-	91	49.505	Oryzias_latipes
ENSGAFG00000014563	-	52	49.635	ENSORLG00020006820	-	65	49.635	Oryzias_latipes_hni
ENSGAFG00000014563	-	98	84.356	ENSPMEG00000022852	-	95	84.356	Poecilia_mexicana
ENSGAFG00000014563	-	99	84.639	ENSPREG00000016593	-	85	84.639	Poecilia_reticulata
ENSGAFG00000014563	-	76	48.837	ENSPREG00000004746	-	78	48.837	Poecilia_reticulata
ENSGAFG00000014563	-	72	52.542	ENSPNYG00000011973	-	99	52.542	Pundamilia_nyererei
ENSGAFG00000014563	-	53	57.812	ENSPNYG00000006306	-	90	57.812	Pundamilia_nyererei
ENSGAFG00000014563	-	67	40.553	ENSPNAG00000015513	si:dkey-210j14.3	88	43.017	Pygocentrus_nattereri
ENSGAFG00000014563	-	51	48.571	ENSXCOG00000010950	si:dkey-210j14.3	56	48.571	Xiphophorus_couchianus
ENSGAFG00000014563	-	55	53.774	ENSXMAG00000022137	-	82	53.774	Xiphophorus_maculatus