EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014571 (Gene tree)
Gene ID: -
Gene Symbol: sfpq
Alias: hm:zeh0027|wis|wu:fa11h12|wu:fd10f03|zgc:85935
Full Name: splicing factor proline/glutamine-rich
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 23485 bases
Position: chrNHOQ01002476.1:72083-95567
Accession: ZDB-GENE-040426-2452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021643	RRM_1	PF00076.22	5.5e-30	1	2
ENSGAFP00000021643	RRM_1	PF00076.22	5.5e-30	2	2
ENSGAFP00000021630	RRM_1	PF00076.22	8.4e-30	1	2
ENSGAFP00000021630	RRM_1	PF00076.22	8.4e-30	2	2
ENSGAFP00000021637	RRM_1	PF00076.22	9.3e-30	1	2
ENSGAFP00000021637	RRM_1	PF00076.22	9.3e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000021838	-	2552	-	ENSGAFP00000021637	700 (aa)	-	-
ENSGAFT00000021831	-	2465	-	ENSGAFP00000021630	671 (aa)	-	-
ENSGAFT00000021844	-	1725	-	ENSGAFP00000021643	574 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014571's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014571's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014571	sfpq	57	58.559	ENSGAFG00000006327	pspc1	72	57.062
ENSGAFG00000014571	sfpq	53	64.052	ENSGAFG00000011460	nono	94	54.484

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014571	sfpq	57	77.914	ENSG00000116560	SFPQ	98	63.927	Homo_sapiens
ENSGAFG00000014571	sfpq	96	76.056	ENSAPOG00000024257	sfpq	100	72.394	Acanthochromis_polyacanthus
ENSGAFG00000014571	sfpq	57	77.914	ENSAMEG00000000815	SFPQ	99	67.654	Ailuropoda_melanoleuca
ENSGAFG00000014571	sfpq	93	73.694	ENSACIG00000000905	sfpq	94	73.227	Amphilophus_citrinellus
ENSGAFG00000014571	sfpq	97	74.658	ENSAOCG00000002889	sfpq	100	71.243	Amphiprion_ocellaris
ENSGAFG00000014571	sfpq	97	74.658	ENSAPEG00000016556	sfpq	100	71.243	Amphiprion_percula
ENSGAFG00000014571	sfpq	96	76.446	ENSATEG00000002981	sfpq	99	70.083	Anabas_testudineus
ENSGAFG00000014571	sfpq	79	45.151	ENSANAG00000027438	-	88	48.722	Aotus_nancymaae
ENSGAFG00000014571	sfpq	100	71.227	ENSACLG00000022332	sfpq	100	71.368	Astatotilapia_calliptera
ENSGAFG00000014571	sfpq	69	69.668	ENSAMXG00000011538	sfpq	94	58.088	Astyanax_mexicanus
ENSGAFG00000014571	sfpq	57	77.914	ENSBTAG00000016328	SFPQ	92	53.323	Bos_taurus
ENSGAFG00000014571	sfpq	57	77.914	ENSCJAG00000001431	SFPQ	74	60.566	Callithrix_jacchus
ENSGAFG00000014571	sfpq	60	72.046	ENSCAFG00000018271	-	82	57.040	Canis_familiaris
ENSGAFG00000014571	sfpq	64	64.230	ENSCAFG00000017608	-	69	60.677	Canis_familiaris
ENSGAFG00000014571	sfpq	57	77.914	ENSCAFG00000003595	-	85	57.666	Canis_familiaris
ENSGAFG00000014571	sfpq	50	65.646	ENSCAFG00020010702	-	100	62.108	Canis_lupus_dingo
ENSGAFG00000014571	sfpq	60	72.046	ENSCAFG00020004881	-	82	57.092	Canis_lupus_dingo
ENSGAFG00000014571	sfpq	57	77.914	ENSCHIG00000023097	SFPQ	92	53.453	Capra_hircus
ENSGAFG00000014571	sfpq	50	56.721	ENSTSYG00000035106	-	87	59.936	Carlito_syrichta
ENSGAFG00000014571	sfpq	57	77.914	ENSCCAG00000029361	-	74	60.755	Cebus_capucinus
ENSGAFG00000014571	sfpq	57	51.205	ENSCATG00000032664	-	74	42.144	Cercocebus_atys
ENSGAFG00000014571	sfpq	57	75.767	ENSCATG00000036179	-	97	49.850	Cercocebus_atys
ENSGAFG00000014571	sfpq	57	77.914	ENSCSAG00000001082	SFPQ	74	60.566	Chlorocebus_sabaeus
ENSGAFG00000014571	sfpq	52	67.717	ENSCHOG00000009131	SFPQ	100	65.879	Choloepus_hoffmanni
ENSGAFG00000014571	sfpq	57	78.528	ENSCPBG00000018674	SFPQ	85	58.246	Chrysemys_picta_bellii
ENSGAFG00000014571	sfpq	59	75.073	ENSCGRG00001011698	Sfpq	90	53.882	Cricetulus_griseus_chok1gshd
ENSGAFG00000014571	sfpq	57	77.607	ENSCGRG00000010128	Sfpq	96	67.586	Cricetulus_griseus_crigri
ENSGAFG00000014571	sfpq	100	62.642	ENSCSEG00000007852	sfpq	100	63.105	Cynoglossus_semilaevis
ENSGAFG00000014571	sfpq	96	83.957	ENSCVAG00000019538	sfpq	100	72.959	Cyprinodon_variegatus
ENSGAFG00000014571	sfpq	90	59.747	ENSDARG00000011564	sfpq	100	78.261	Danio_rerio
ENSGAFG00000014571	sfpq	57	77.914	ENSDNOG00000049454	SFPQ	98	50.621	Dasypus_novemcinctus
ENSGAFG00000014571	sfpq	57	77.914	ENSDORG00000008109	Sfpq	90	53.787	Dipodomys_ordii
ENSGAFG00000014571	sfpq	57	69.325	ENSETEG00000001095	SFPQ	61	58.901	Echinops_telfairi
ENSGAFG00000014571	sfpq	57	77.914	ENSEASG00005012012	SFPQ	98	50.970	Equus_asinus_asinus
ENSGAFG00000014571	sfpq	57	77.914	ENSECAG00000000642	SFPQ	98	50.970	Equus_caballus
ENSGAFG00000014571	sfpq	71	68.664	ENSELUG00000023145	sfpq	93	60.067	Esox_lucius
ENSGAFG00000014571	sfpq	57	77.914	ENSFCAG00000042862	SFPQ	80	57.491	Felis_catus
ENSGAFG00000014571	sfpq	50	68.954	ENSFALG00000000731	SFPQ	100	65.439	Ficedula_albicollis
ENSGAFG00000014571	sfpq	50	57.003	ENSFDAG00000017723	-	100	59.605	Fukomys_damarensis
ENSGAFG00000014571	sfpq	100	76.337	ENSFHEG00000015200	sfpq	100	77.005	Fundulus_heteroclitus
ENSGAFG00000014571	sfpq	93	66.727	ENSGMOG00000011950	SFPQ	99	78.282	Gadus_morhua
ENSGAFG00000014571	sfpq	88	61.844	ENSGMOG00000011957	sfpq	94	63.105	Gadus_morhua
ENSGAFG00000014571	sfpq	64	70.833	ENSGALG00000002514	SFPQ	80	59.353	Gallus_gallus
ENSGAFG00000014571	sfpq	95	69.151	ENSGACG00000002034	sfpq	100	64.255	Gasterosteus_aculeatus
ENSGAFG00000014571	sfpq	57	77.914	ENSGGOG00000026354	SFPQ	100	65.722	Gorilla_gorilla
ENSGAFG00000014571	sfpq	100	71.227	ENSHBUG00000016818	sfpq	100	71.368	Haplochromis_burtoni
ENSGAFG00000014571	sfpq	57	77.914	ENSHGLG00000012001	SFPQ	82	57.366	Heterocephalus_glaber_female
ENSGAFG00000014571	sfpq	94	74.817	ENSHCOG00000008612	sfpq	91	75.749	Hippocampus_comes
ENSGAFG00000014571	sfpq	76	67.873	ENSIPUG00000013076	SFPQ	95	60.217	Ictalurus_punctatus
ENSGAFG00000014571	sfpq	57	77.914	ENSJJAG00000015633	Sfpq	89	53.456	Jaculus_jaculus
ENSGAFG00000014571	sfpq	100	65.924	ENSKMAG00000000238	sfpq	100	67.004	Kryptolebias_marmoratus
ENSGAFG00000014571	sfpq	100	63.815	ENSLBEG00000003163	sfpq	93	66.032	Labrus_bergylta
ENSGAFG00000014571	sfpq	65	69.509	ENSLACG00000014728	SFPQ	95	56.410	Latimeria_chalumnae
ENSGAFG00000014571	sfpq	95	53.683	ENSLOCG00000001067	sfpq	90	65.430	Lepisosteus_oculatus
ENSGAFG00000014571	sfpq	57	77.914	ENSLAFG00000015951	SFPQ	86	58.393	Loxodonta_africana
ENSGAFG00000014571	sfpq	57	77.914	ENSMFAG00000000797	SFPQ	74	60.640	Macaca_fascicularis
ENSGAFG00000014571	sfpq	57	77.914	ENSMMUG00000019154	SFPQ	79	57.639	Macaca_mulatta
ENSGAFG00000014571	sfpq	57	77.914	ENSMNEG00000038895	SFPQ	74	60.566	Macaca_nemestrina
ENSGAFG00000014571	sfpq	97	70.364	ENSMAMG00000007875	sfpq	99	69.536	Mastacembelus_armatus
ENSGAFG00000014571	sfpq	100	70.480	ENSMZEG00005026091	sfpq	100	70.621	Maylandia_zebra
ENSGAFG00000014571	sfpq	55	69.940	ENSMGAG00000004237	SFPQ	86	69.940	Meleagris_gallopavo
ENSGAFG00000014571	sfpq	59	75.073	ENSMAUG00000006402	Sfpq	90	53.727	Mesocricetus_auratus
ENSGAFG00000014571	sfpq	57	77.914	ENSMICG00000027265	SFPQ	98	51.498	Microcebus_murinus
ENSGAFG00000014571	sfpq	59	71.848	ENSMOCG00000019075	Sfpq	92	63.901	Microtus_ochrogaster
ENSGAFG00000014571	sfpq	100	68.503	ENSMMOG00000001074	sfpq	100	68.079	Mola_mola
ENSGAFG00000014571	sfpq	64	70.235	ENSMODG00000017937	SFPQ	64	68.372	Monodelphis_domestica
ENSGAFG00000014571	sfpq	96	73.345	ENSMALG00000010381	sfpq	99	73.860	Monopterus_albus
ENSGAFG00000014571	sfpq	57	77.607	MGP_CAROLIEiJ_G0026487	Sfpq	90	53.077	Mus_caroli
ENSGAFG00000014571	sfpq	57	77.607	ENSMUSG00000028820	Sfpq	90	53.251	Mus_musculus
ENSGAFG00000014571	sfpq	57	77.607	MGP_PahariEiJ_G0028818	Sfpq	98	51.149	Mus_pahari
ENSGAFG00000014571	sfpq	57	77.607	MGP_SPRETEiJ_G0027466	Sfpq	90	53.251	Mus_spretus
ENSGAFG00000014571	sfpq	51	67.203	ENSMPUG00000014931	-	100	67.628	Mustela_putorius_furo
ENSGAFG00000014571	sfpq	64	68.750	ENSMLUG00000027090	SFPQ	98	66.968	Myotis_lucifugus
ENSGAFG00000014571	sfpq	57	77.607	ENSNGAG00000000888	Sfpq	93	52.941	Nannospalax_galili
ENSGAFG00000014571	sfpq	100	70.014	ENSNBRG00000017479	sfpq	100	70.904	Neolamprologus_brichardi
ENSGAFG00000014571	sfpq	64	70.157	ENSMEUG00000014082	SFPQ	63	67.793	Notamacropus_eugenii
ENSGAFG00000014571	sfpq	57	77.914	ENSOPRG00000013696	SFPQ	62	67.195	Ochotona_princeps
ENSGAFG00000014571	sfpq	63	64.187	ENSODEG00000005485	SFPQ	90	54.016	Octodon_degus
ENSGAFG00000014571	sfpq	100	69.350	ENSONIG00000017737	sfpq	100	69.412	Oreochromis_niloticus
ENSGAFG00000014571	sfpq	50	67.541	ENSOANG00000008789	-	100	66.193	Ornithorhynchus_anatinus
ENSGAFG00000014571	sfpq	57	77.914	ENSOCUG00000001877	SFPQ	90	65.443	Oryctolagus_cuniculus
ENSGAFG00000014571	sfpq	100	64.333	ENSORLG00000007459	sfpq	100	68.919	Oryzias_latipes
ENSGAFG00000014571	sfpq	100	67.158	ENSORLG00020011818	sfpq	100	68.237	Oryzias_latipes_hni
ENSGAFG00000014571	sfpq	100	63.995	ENSORLG00015002131	sfpq	100	68.371	Oryzias_latipes_hsok
ENSGAFG00000014571	sfpq	100	68.750	ENSOMEG00000018020	sfpq	100	69.304	Oryzias_melastigma
ENSGAFG00000014571	sfpq	57	77.914	ENSOGAG00000027710	SFPQ	99	58.877	Otolemur_garnettii
ENSGAFG00000014571	sfpq	57	77.508	ENSOARG00000019439	SFPQ	66	67.981	Ovis_aries
ENSGAFG00000014571	sfpq	57	77.914	ENSPPAG00000030078	SFPQ	61	68.213	Pan_paniscus
ENSGAFG00000014571	sfpq	57	70.859	ENSPTRG00000000518	SFPQ	78	53.565	Pan_troglodytes
ENSGAFG00000014571	sfpq	57	77.914	ENSPANG00000005380	SFPQ	65	67.882	Papio_anubis
ENSGAFG00000014571	sfpq	87	61.996	ENSPKIG00000023035	sfpq	95	65.225	Paramormyrops_kingsleyae
ENSGAFG00000014571	sfpq	64	70.052	ENSPSIG00000011494	SFPQ	99	67.824	Pelodiscus_sinensis
ENSGAFG00000014571	sfpq	100	59.207	ENSPMGG00000023883	sfpq	100	57.806	Periophthalmus_magnuspinnatus
ENSGAFG00000014571	sfpq	59	75.073	ENSPEMG00000009794	Sfpq	92	66.443	Peromyscus_maniculatus_bairdii
ENSGAFG00000014571	sfpq	55	70.347	ENSPMAG00000005583	sfpq	99	55.278	Petromyzon_marinus
ENSGAFG00000014571	sfpq	68	67.574	ENSPCIG00000000923	SFPQ	75	60.300	Phascolarctos_cinereus
ENSGAFG00000014571	sfpq	97	91.795	ENSPFOG00000003127	sfpq	100	84.345	Poecilia_formosa
ENSGAFG00000014571	sfpq	100	93.653	ENSPREG00000008060	sfpq	100	93.653	Poecilia_reticulata
ENSGAFG00000014571	sfpq	57	77.914	ENSPPYG00000001560	SFPQ	79	57.565	Pongo_abelii
ENSGAFG00000014571	sfpq	56	78.328	ENSPCAG00000006164	SFPQ	60	67.907	Procavia_capensis
ENSGAFG00000014571	sfpq	57	77.914	ENSPCOG00000027127	SFPQ	90	53.643	Propithecus_coquereli
ENSGAFG00000014571	sfpq	57	75.767	ENSPVAG00000001865	SFPQ	80	56.469	Pteropus_vampyrus
ENSGAFG00000014571	sfpq	97	72.231	ENSPNYG00000007494	sfpq	100	71.127	Pundamilia_nyererei
ENSGAFG00000014571	sfpq	82	63.786	ENSPNAG00000002128	sfpq	89	66.917	Pygocentrus_nattereri
ENSGAFG00000014571	sfpq	57	77.607	ENSRNOG00000058461	Sfpq	98	51.073	Rattus_norvegicus
ENSGAFG00000014571	sfpq	56	70.245	ENSRBIG00000035286	SFPQ	100	65.722	Rhinopithecus_bieti
ENSGAFG00000014571	sfpq	57	77.914	ENSRROG00000040992	SFPQ	100	65.722	Rhinopithecus_roxellana
ENSGAFG00000014571	sfpq	50	65.033	ENSSHAG00000012312	-	100	62.857	Sarcophilus_harrisii
ENSGAFG00000014571	sfpq	64	70.052	ENSSHAG00000016107	-	83	70.466	Sarcophilus_harrisii
ENSGAFG00000014571	sfpq	76	68.597	ENSSFOG00015009289	sfpq	94	67.495	Scleropages_formosus
ENSGAFG00000014571	sfpq	93	74.262	ENSSMAG00000018201	sfpq	100	62.625	Scophthalmus_maximus
ENSGAFG00000014571	sfpq	100	67.373	ENSSDUG00000008402	sfpq	100	66.760	Seriola_dumerili
ENSGAFG00000014571	sfpq	100	66.111	ENSSLDG00000018917	sfpq	99	68.013	Seriola_lalandi_dorsalis
ENSGAFG00000014571	sfpq	50	68.649	ENSSARG00000006409	SFPQ	100	66.757	Sorex_araneus
ENSGAFG00000014571	sfpq	96	80.046	ENSSPAG00000016550	sfpq	100	70.950	Stegastes_partitus
ENSGAFG00000014571	sfpq	57	77.914	ENSSSCG00000035690	SFPQ	61	67.981	Sus_scrofa
ENSGAFG00000014571	sfpq	64	71.094	ENSTGUG00000001722	SFPQ	99	68.056	Taeniopygia_guttata
ENSGAFG00000014571	sfpq	100	64.869	ENSTRUG00000003783	sfpq	100	68.652	Takifugu_rubripes
ENSGAFG00000014571	sfpq	88	68.123	ENSTNIG00000011331	sfpq	95	67.851	Tetraodon_nigroviridis
ENSGAFG00000014571	sfpq	57	77.914	ENSTTRG00000013930	SFPQ	61	65.661	Tursiops_truncatus
ENSGAFG00000014571	sfpq	50	78.746	ENSVPAG00000006960	-	58	64.156	Vicugna_pacos
ENSGAFG00000014571	sfpq	57	77.301	ENSXETG00000009682	sfpq	96	74.571	Xenopus_tropicalis
ENSGAFG00000014571	sfpq	100	93.926	ENSXMAG00000016391	sfpq	100	93.520	Xiphophorus_maculatus