EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014646 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 4130 bases
Position: chrNHOQ01002476.1:158356-162485
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021736	GTP_EFTU	PF00009.27	2.4e-53	1	1
ENSGAFP00000021736	GTP_EFTU_D2	PF03144.25	3.1e-15	1	1
ENSGAFP00000021736	GTP_EFTU_D3	PF03143.17	2.8e-42	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000021938	-	2182	-	ENSGAFP00000021736	461 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014646's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014646's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014646	-	100	87.229	ENSGAFG00000007246	-	98	87.611
ENSGAFG00000014646	-	96	30.088	ENSGAFG00000004682	tufm	91	30.088
ENSGAFG00000014646	-	98	63.556	ENSGAFG00000000367	si:dkey-37o8.1	99	63.556
ENSGAFG00000014646	-	95	38.724	ENSGAFG00000005676	gspt1l	76	38.724
ENSGAFG00000014646	-	100	87.013	ENSGAFG00000012643	eef1a1b	98	87.611
ENSGAFG00000014646	-	96	37.162	ENSGAFG00000020793	-	86	37.246
ENSGAFG00000014646	-	100	89.827	ENSGAFG00000014639	-	97	90.625
ENSGAFG00000014646	-	95	41.648	ENSGAFG00000004157	hbs1l	61	41.648

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014646	-	98	93.348	ENSAPOG00000004714	-	98	93.348	Acanthochromis_polyacanthus
ENSGAFG00000014646	-	90	94.189	ENSACIG00000001219	-	97	94.293	Amphilophus_citrinellus
ENSGAFG00000014646	-	87	94.789	ENSAOCG00000022002	-	98	94.789	Amphiprion_ocellaris
ENSGAFG00000014646	-	100	90.239	ENSAOCG00000022039	-	98	90.687	Amphiprion_ocellaris
ENSGAFG00000014646	-	100	90.889	ENSAPEG00000016361	-	98	91.353	Amphiprion_percula
ENSGAFG00000014646	-	98	95.787	ENSATEG00000003244	-	95	95.787	Anabas_testudineus
ENSGAFG00000014646	-	100	94.577	ENSACLG00000022560	-	98	94.678	Astatotilapia_calliptera
ENSGAFG00000014646	-	100	82.251	WBGene00001168	eef-1A.1	98	82.743	Caenorhabditis_elegans
ENSGAFG00000014646	-	100	82.251	WBGene00001169	eef-1A.2	98	82.743	Caenorhabditis_elegans
ENSGAFG00000014646	-	98	80.617	ENSCING00000018894	-	97	80.617	Ciona_intestinalis
ENSGAFG00000014646	-	99	84.716	ENSCING00000021478	-	98	85.301	Ciona_intestinalis
ENSGAFG00000014646	-	100	78.112	ENSCING00000007703	-	97	78.289	Ciona_intestinalis
ENSGAFG00000014646	-	98	81.099	ENSCING00000005126	-	98	81.099	Ciona_intestinalis
ENSGAFG00000014646	-	99	75.817	ENSCSAVG00000001085	-	89	76.906	Ciona_savignyi
ENSGAFG00000014646	-	99	84.683	ENSCSAVG00000006357	-	96	94.000	Ciona_savignyi
ENSGAFG00000014646	-	98	81.978	ENSCSAVG00000009663	-	98	81.978	Ciona_savignyi
ENSGAFG00000014646	-	98	80.828	ENSCSAVG00000003196	-	98	80.828	Ciona_savignyi
ENSGAFG00000014646	-	90	85.749	ENSCSEG00000007972	-	98	86.139	Cynoglossus_semilaevis
ENSGAFG00000014646	-	98	95.565	ENSCSEG00000008011	-	98	95.565	Cynoglossus_semilaevis
ENSGAFG00000014646	-	89	85.680	ENSCSEG00000007992	-	97	85.856	Cynoglossus_semilaevis
ENSGAFG00000014646	-	100	98.265	ENSCVAG00000019356	-	100	98.265	Cyprinodon_variegatus
ENSGAFG00000014646	-	100	86.797	FBgn0284245	eEF1alpha1	97	87.277	Drosophila_melanogaster
ENSGAFG00000014646	-	98	85.619	FBgn0000557	eEF1alpha2	98	85.619	Drosophila_melanogaster
ENSGAFG00000014646	-	99	82.609	ENSEBUG00000015814	-	98	83.149	Eptatretus_burgeri
ENSGAFG00000014646	-	100	97.831	ENSFHEG00000015054	-	100	97.831	Fundulus_heteroclitus
ENSGAFG00000014646	-	98	95.565	ENSGACG00000002182	-	98	95.565	Gasterosteus_aculeatus
ENSGAFG00000014646	-	100	93.492	ENSGACG00000002143	-	98	93.792	Gasterosteus_aculeatus
ENSGAFG00000014646	-	56	91.016	ENSHBUG00000017166	-	92	91.057	Haplochromis_burtoni
ENSGAFG00000014646	-	98	95.344	ENSHCOG00000008468	-	98	95.344	Hippocampus_comes
ENSGAFG00000014646	-	99	85.249	ENSHCOG00000008489	-	97	85.491	Hippocampus_comes
ENSGAFG00000014646	-	99	84.348	ENSLBEG00000002955	-	98	84.479	Labrus_bergylta
ENSGAFG00000014646	-	98	94.678	ENSLBEG00000002759	-	98	94.678	Labrus_bergylta
ENSGAFG00000014646	-	100	96.963	ENSMAMG00000007715	-	100	96.963	Mastacembelus_armatus
ENSGAFG00000014646	-	98	92.683	ENSMMOG00000001165	-	100	94.444	Mola_mola
ENSGAFG00000014646	-	99	76.316	ENSMMOG00000018160	-	95	86.957	Mola_mola
ENSGAFG00000014646	-	99	85.870	ENSMMOG00000001106	-	98	86.253	Mola_mola
ENSGAFG00000014646	-	100	83.117	ENSNBRG00000017346	-	97	82.965	Neolamprologus_brichardi
ENSGAFG00000014646	-	76	91.477	ENSONIG00000017760	-	98	91.477	Oreochromis_niloticus
ENSGAFG00000014646	-	100	97.397	ENSORLG00000007614	eef1a	100	97.397	Oryzias_latipes
ENSGAFG00000014646	-	100	97.180	ENSORLG00015002397	-	100	97.180	Oryzias_latipes_hsok
ENSGAFG00000014646	-	100	98.048	ENSOMEG00000018226	-	100	98.048	Oryzias_melastigma
ENSGAFG00000014646	-	95	48.747	ENSPMGG00000022427	-	97	60.000	Periophthalmus_magnuspinnatus
ENSGAFG00000014646	-	98	94.469	ENSPMGG00000023911	-	100	97.674	Periophthalmus_magnuspinnatus
ENSGAFG00000014646	-	100	99.783	ENSPFOG00000003924	-	100	99.758	Poecilia_formosa
ENSGAFG00000014646	-	100	99.783	ENSPLAG00000004316	-	100	99.783	Poecilia_latipinna
ENSGAFG00000014646	-	100	99.566	ENSPMEG00000001010	-	100	99.566	Poecilia_mexicana
ENSGAFG00000014646	-	100	99.132	ENSPREG00000008243	-	100	99.132	Poecilia_reticulata
ENSGAFG00000014646	-	100	94.577	ENSPNYG00000007263	-	98	94.678	Pundamilia_nyererei
ENSGAFG00000014646	-	97	81.124	YPR080W	TEF1	98	80.488	Saccharomyces_cerevisiae
ENSGAFG00000014646	-	97	81.124	YBR118W	TEF2	98	80.488	Saccharomyces_cerevisiae
ENSGAFG00000014646	-	98	83.510	ENSSMAG00000018469	-	98	83.510	Scophthalmus_maximus
ENSGAFG00000014646	-	53	93.033	ENSSMAG00000016277	-	96	93.033	Scophthalmus_maximus
ENSGAFG00000014646	-	98	95.787	ENSSDUG00000008198	-	98	95.787	Seriola_dumerili
ENSGAFG00000014646	-	98	93.792	ENSSPAG00000001710	-	98	93.792	Stegastes_partitus
ENSGAFG00000014646	-	98	95.787	ENSTRUG00000005727	ef-1a	98	95.787	Takifugu_rubripes
ENSGAFG00000014646	-	99	85.870	ENSTRUG00000005066	-	98	86.253	Takifugu_rubripes
ENSGAFG00000014646	-	98	94.900	ENSTNIG00000002619	-	98	94.900	Tetraodon_nigroviridis
ENSGAFG00000014646	-	99	81.957	ENSTNIG00000002617	-	94	83.742	Tetraodon_nigroviridis
ENSGAFG00000014646	-	100	99.783	ENSXCOG00000001542	-	100	100.000	Xiphophorus_couchianus