EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014730 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5578 bases
Position: chrNHOQ01001904.1:11685434-11691011
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021834	MMR_HSR1	PF01926.23	5.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022043	-	3500	-	ENSGAFP00000021834	202 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014730's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014730's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014730	-	79	35.366	ENSGAFG00000020102	si:dkey-13a21.4	79	35.366
ENSGAFG00000014730	-	78	36.025	ENSGAFG00000015135	rab36	62	36.025
ENSGAFG00000014730	-	83	42.857	ENSGAFG00000021725	rab11al	77	42.857
ENSGAFG00000014730	-	95	36.041	ENSGAFG00000021724	rab25b	94	36.041
ENSGAFG00000014730	-	80	38.788	ENSGAFG00000021688	-	79	38.788
ENSGAFG00000014730	-	83	43.195	ENSGAFG00000004604	RAB39B	78	43.195
ENSGAFG00000014730	-	83	44.379	ENSGAFG00000006932	-	78	44.379
ENSGAFG00000014730	-	94	33.010	ENSGAFG00000012579	rab34a	77	33.010
ENSGAFG00000014730	-	81	40.476	ENSGAFG00000018916	-	73	40.476
ENSGAFG00000014730	-	79	45.283	ENSGAFG00000006356	rab6a	76	45.283
ENSGAFG00000014730	-	83	47.024	ENSGAFG00000006846	rab2a	79	47.024
ENSGAFG00000014730	-	86	31.792	ENSGAFG00000005188	rabl2	74	31.792
ENSGAFG00000014730	-	96	43.814	ENSGAFG00000014787	-	97	43.814
ENSGAFG00000014730	-	85	42.442	ENSGAFG00000015702	zgc:171927	69	42.442
ENSGAFG00000014730	-	80	38.788	ENSGAFG00000020476	RAB7A	79	38.788
ENSGAFG00000014730	-	81	36.686	ENSGAFG00000015490	rab33a	61	36.686
ENSGAFG00000014730	-	88	31.746	ENSGAFG00000014541	rras2	91	32.828
ENSGAFG00000014730	-	70	37.415	ENSGAFG00000020906	rheb	77	37.415
ENSGAFG00000014730	-	81	43.558	ENSGAFG00000002756	rab15	76	43.558
ENSGAFG00000014730	-	83	30.601	ENSGAFG00000007473	rasl11a	69	30.601
ENSGAFG00000014730	-	58	30.252	ENSGAFG00000008497	arl8bb	61	30.252
ENSGAFG00000014730	-	96	37.129	ENSGAFG00000000591	rab9a	90	37.129
ENSGAFG00000014730	-	83	33.136	ENSGAFG00000010541	rras	91	33.702
ENSGAFG00000014730	-	79	45.283	ENSGAFG00000019872	rab41	75	45.283
ENSGAFG00000014730	-	82	42.169	ENSGAFG00000000918	-	82	42.169
ENSGAFG00000014730	-	98	37.879	ENSGAFG00000011713	rab25a	97	37.379
ENSGAFG00000014730	-	75	33.553	ENSGAFG00000021765	kras	95	31.915
ENSGAFG00000014730	-	80	35.185	ENSGAFG00000001301	rab22a	83	35.185
ENSGAFG00000014730	-	80	40.491	ENSGAFG00000002141	rab42a	74	40.491
ENSGAFG00000014730	-	95	31.863	ENSGAFG00000000629	RAB29	98	31.863
ENSGAFG00000014730	-	94	41.146	ENSGAFG00000010916	rab6bb	92	41.146
ENSGAFG00000014730	-	82	39.106	ENSGAFG00000019659	rab33ba	74	39.106
ENSGAFG00000014730	-	80	32.716	ENSGAFG00000021814	hrasb	89	33.918
ENSGAFG00000014730	-	95	33.790	ENSGAFG00000015249	-	90	34.247
ENSGAFG00000014730	-	85	48.555	ENSGAFG00000020309	rab30	91	48.555
ENSGAFG00000014730	-	95	38.776	ENSGAFG00000019305	rab1ba	97	38.776
ENSGAFG00000014730	-	84	32.749	ENSGAFG00000021738	rhebl1	92	32.749
ENSGAFG00000014730	-	94	40.415	ENSGAFG00000011619	rab5aa	88	40.415
ENSGAFG00000014730	-	91	38.251	ENSGAFG00000017305	RAB15	88	42.424
ENSGAFG00000014730	-	90	30.851	ENSGAFG00000007684	rab23	96	31.000
ENSGAFG00000014730	-	80	40.000	ENSGAFG00000004099	rab9b	73	40.000
ENSGAFG00000014730	-	96	37.864	ENSGAFG00000016549	rab11a	95	37.864
ENSGAFG00000014730	-	79	44.025	ENSGAFG00000003642	-	88	38.579
ENSGAFG00000014730	-	93	41.361	ENSGAFG00000017270	rab6ba	91	41.361
ENSGAFG00000014730	-	89	41.899	ENSGAFG00000005477	rab4a	82	41.899
ENSGAFG00000014730	-	84	43.860	ENSGAFG00000008560	rab18b	80	43.860
ENSGAFG00000014730	-	82	41.212	ENSGAFG00000005388	si:dkey-16l2.16	78	41.212
ENSGAFG00000014730	-	82	43.373	ENSGAFG00000007102	rab11bb	76	43.373
ENSGAFG00000014730	-	86	44.000	ENSGAFG00000002790	rab18a	85	43.017
ENSGAFG00000014730	-	83	38.506	ENSGAFG00000021202	zgc:101559	74	38.506
ENSGAFG00000014730	-	79	44.172	ENSGAFG00000008183	si:dkey-34d22.5	73	44.172
ENSGAFG00000014730	-	95	37.056	ENSGAFG00000001289	rab1ab	97	37.056
ENSGAFG00000014730	-	93	39.896	ENSGAFG00000000884	rab5c	87	39.896
ENSGAFG00000014730	-	59	30.081	ENSGAFG00000002547	arl5c	64	30.081
ENSGAFG00000014730	-	96	38.278	ENSGAFG00000005679	rab11ba	95	38.278

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014730	-	96	82.383	ENSG00000172794	RAB37	87	88.679	Homo_sapiens
ENSGAFG00000014730	-	99	85.427	ENSACIG00000023222	-	87	85.427	Amphilophus_citrinellus
ENSGAFG00000014730	-	95	82.812	ENSCPOG00000025645	RAB37	89	82.812	Cavia_porcellus
ENSGAFG00000014730	-	95	82.292	ENSCLAG00000008913	RAB37	89	82.292	Chinchilla_lanigera
ENSGAFG00000014730	-	99	93.500	ENSCVAG00000014416	-	95	93.500	Cyprinodon_variegatus
ENSGAFG00000014730	-	94	80.208	ENSELUG00000023120	-	91	80.208	Esox_lucius
ENSGAFG00000014730	-	95	82.292	ENSFDAG00000015285	RAB37	89	82.292	Fukomys_damarensis
ENSGAFG00000014730	-	95	82.292	ENSHGLG00000004384	RAB37	89	82.292	Heterocephalus_glaber_female
ENSGAFG00000014730	-	95	82.292	ENSHGLG00100012557	-	89	82.292	Heterocephalus_glaber_male
ENSGAFG00000014730	-	95	90.104	ENSLBEG00000027539	-	88	90.104	Labrus_bergylta
ENSGAFG00000014730	-	78	94.937	ENSMAMG00000020286	-	76	94.937	Mastacembelus_armatus
ENSGAFG00000014730	-	95	82.292	MGP_CAROLIEiJ_G0017386	Rab37	89	82.292	Mus_caroli
ENSGAFG00000014730	-	95	82.292	ENSMUSG00000020732	Rab37	89	82.292	Mus_musculus
ENSGAFG00000014730	-	95	82.292	MGP_PahariEiJ_G0018517	Rab37	89	82.292	Mus_pahari
ENSGAFG00000014730	-	95	82.292	MGP_SPRETEiJ_G0018231	Rab37	89	82.292	Mus_spretus
ENSGAFG00000014730	-	97	73.846	ENSNBRG00000011872	-	93	73.846	Neolamprologus_brichardi
ENSGAFG00000014730	-	96	89.637	ENSORLG00000024558	-	79	89.637	Oryzias_latipes
ENSGAFG00000014730	-	96	89.637	ENSORLG00020015717	-	79	89.637	Oryzias_latipes_hni
ENSGAFG00000014730	-	97	89.286	ENSORLG00015013564	-	99	89.286	Oryzias_latipes_hsok
ENSGAFG00000014730	-	96	90.155	ENSOMEG00000018494	-	79	90.155	Oryzias_melastigma
ENSGAFG00000014730	-	95	82.383	ENSPCIG00000004450	-	89	82.383	Phascolarctos_cinereus
ENSGAFG00000014730	-	96	96.373	ENSPFOG00000006314	-	79	96.373	Poecilia_formosa
ENSGAFG00000014730	-	96	96.373	ENSPFOG00000019144	-	79	96.373	Poecilia_formosa
ENSGAFG00000014730	-	96	96.891	ENSPMEG00000002564	-	79	96.891	Poecilia_mexicana
ENSGAFG00000014730	-	96	96.891	ENSPMEG00000017161	-	79	96.891	Poecilia_mexicana
ENSGAFG00000014730	-	95	71.875	ENSPPYG00000008601	-	87	71.875	Pongo_abelii
ENSGAFG00000014730	-	95	80.208	ENSPNAG00000021675	-	89	80.208	Pygocentrus_nattereri
ENSGAFG00000014730	-	96	96.373	ENSXMAG00000021303	-	82	95.361	Xiphophorus_maculatus