EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000014777 (Gene tree)
Gene ID: -
Gene Symbol: SRRM3
Alias: FLJ37078
Full Name: serine/arginine repetitive matrix 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 42939 bases
Position: chrNHOQ01001678.1:8071399-8114337
Accession: 26729
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021902	cwf21	PF08312.12	1.5e-15	1	1
ENSGAFP00000021902	SRRM_C	PF15230.6	5.7e-23	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022111	SRRM3-201	3998	-	ENSGAFP00000021902	640 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014777's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014777's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014777	SRRM3	87	81.239	ENSAPOG00000000288	SRRM3	87	81.239	Acanthochromis_polyacanthus
ENSGAFG00000014777	SRRM3	87	76.814	ENSACLG00000005269	SRRM3	87	76.814	Astatotilapia_calliptera
ENSGAFG00000014777	SRRM3	87	52.422	ENSAMXG00000016051	-	87	51.801	Astyanax_mexicanus
ENSGAFG00000014777	SRRM3	87	44.901	ENSCPBG00000027784	SRRM3	52	43.923	Chrysemys_picta_bellii
ENSGAFG00000014777	SRRM3	88	70.157	ENSCSEG00000010978	-	80	70.435	Cynoglossus_semilaevis
ENSGAFG00000014777	SRRM3	87	44.536	ENSGAGG00000021058	SRRM3	59	42.440	Gopherus_agassizii
ENSGAFG00000014777	SRRM3	88	77.032	ENSHBUG00000005061	SRRM3	87	76.991	Haplochromis_burtoni
ENSGAFG00000014777	SRRM3	87	51.031	ENSIPUG00000012467	srrm3	87	52.870	Ictalurus_punctatus
ENSGAFG00000014777	SRRM3	88	81.675	ENSKMAG00000013495	SRRM3	87	81.690	Kryptolebias_marmoratus
ENSGAFG00000014777	SRRM3	53	55.899	ENSLOCG00000002879	SRRM3	99	56.742	Lepisosteus_oculatus
ENSGAFG00000014777	SRRM3	90	77.069	ENSMALG00000000844	-	89	77.208	Monopterus_albus
ENSGAFG00000014777	SRRM3	88	59.113	ENSONIG00000012732	-	57	64.045	Oreochromis_niloticus
ENSGAFG00000014777	SRRM3	88	77.622	ENSORLG00000026242	-	89	77.465	Oryzias_latipes
ENSGAFG00000014777	SRRM3	100	75.039	ENSORLG00020016592	-	89	77.289	Oryzias_latipes_hni
ENSGAFG00000014777	SRRM3	88	77.448	ENSORLG00015022712	SRRM3	89	77.289	Oryzias_latipes_hsok
ENSGAFG00000014777	SRRM3	100	74.034	ENSOMEG00000010768	-	88	76.502	Oryzias_melastigma
ENSGAFG00000014777	SRRM3	87	51.795	ENSPKIG00000017233	SRRM3	92	51.864	Paramormyrops_kingsleyae
ENSGAFG00000014777	SRRM3	88	67.402	ENSPFOG00000009007	SRRM3	89	62.010	Poecilia_formosa
ENSGAFG00000014777	SRRM3	100	95.781	ENSPMEG00000011981	-	100	95.781	Poecilia_mexicana
ENSGAFG00000014777	SRRM3	100	95.950	ENSPREG00000008138	-	100	95.950	Poecilia_reticulata
ENSGAFG00000014777	SRRM3	87	53.072	ENSPNAG00000009621	SRRM3	87	52.881	Pygocentrus_nattereri
ENSGAFG00000014777	SRRM3	60	54.146	ENSSFOG00015001696	SRRM3	78	61.162	Scleropages_formosus
ENSGAFG00000014777	SRRM3	88	79.262	ENSSMAG00000000476	SRRM3	89	79.262	Scophthalmus_maximus
ENSGAFG00000014777	SRRM3	87	79.412	ENSSLDG00000020070	SRRM3	87	79.758	Seriola_lalandi_dorsalis
ENSGAFG00000014777	SRRM3	68	80.741	ENSTNIG00000008549	-	71	80.741	Tetraodon_nigroviridis
ENSGAFG00000014777	SRRM3	100	97.344	ENSXMAG00000005663	-	100	97.344	Xiphophorus_maculatus