EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014787 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 8699 bases
Position: chrNHOQ01001560.1:4084838-4093536
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000021917	MMR_HSR1	PF01926.23	6.6e-05	1	1
ENSGAFP00000021920	MMR_HSR1	PF01926.23	6.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022129	-	2734	-	ENSGAFP00000021920	200 (aa)	-	-
ENSGAFT00000022126	-	594	-	ENSGAFP00000021917	197 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014787's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014787's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014787	-	74	45.395	ENSGAFG00000015249	-	63	45.395
ENSGAFG00000014787	-	97	43.814	ENSGAFG00000014730	-	96	43.814
ENSGAFG00000014787	-	82	38.095	ENSGAFG00000018916	-	74	38.095
ENSGAFG00000014787	-	95	53.646	ENSGAFG00000015702	zgc:171927	77	53.646
ENSGAFG00000014787	-	96	40.625	ENSGAFG00000021724	rab25b	92	40.625
ENSGAFG00000014787	-	79	36.875	ENSGAFG00000015135	rab36	62	36.875
ENSGAFG00000014787	-	79	44.937	ENSGAFG00000010916	rab6bb	76	44.937
ENSGAFG00000014787	-	93	53.261	ENSGAFG00000000918	-	88	55.866
ENSGAFG00000014787	-	97	41.463	ENSGAFG00000016549	rab11a	95	41.463
ENSGAFG00000014787	-	85	50.296	ENSGAFG00000020309	rab30	89	50.296
ENSGAFG00000014787	-	88	53.714	ENSGAFG00000017305	RAB15	93	58.696
ENSGAFG00000014787	-	94	42.328	ENSGAFG00000011619	rab5aa	88	42.328
ENSGAFG00000014787	-	87	46.821	ENSGAFG00000007102	rab11bb	79	46.821
ENSGAFG00000014787	-	96	40.104	ENSGAFG00000011713	rab25a	87	47.222
ENSGAFG00000014787	-	84	47.024	ENSGAFG00000021725	rab11al	78	47.024
ENSGAFG00000014787	-	85	41.860	ENSGAFG00000002141	rab42a	79	41.860
ENSGAFG00000014787	-	96	34.184	ENSGAFG00000018295	si:ch73-116o1.2	94	34.694
ENSGAFG00000014787	-	79	32.530	ENSGAFG00000019285	rasl11b	79	31.282
ENSGAFG00000014787	-	94	40.957	ENSGAFG00000006356	rab6a	89	40.957
ENSGAFG00000014787	-	80	33.951	ENSGAFG00000005188	rabl2	71	33.951
ENSGAFG00000014787	-	81	42.857	ENSGAFG00000019659	rab33ba	72	41.143
ENSGAFG00000014787	-	91	37.696	ENSGAFG00000012579	rab34a	72	37.696
ENSGAFG00000014787	-	81	43.478	ENSGAFG00000000884	rab5c	80	40.113
ENSGAFG00000014787	-	95	35.789	ENSGAFG00000001301	rab22a	97	35.789
ENSGAFG00000014787	-	81	39.181	ENSGAFG00000000591	rab9a	78	39.181
ENSGAFG00000014787	-	88	37.430	ENSGAFG00000020476	RAB7A	86	37.430
ENSGAFG00000014787	-	88	54.857	ENSGAFG00000002756	rab15	82	54.857
ENSGAFG00000014787	-	85	44.186	ENSGAFG00000004604	RAB39B	81	44.186
ENSGAFG00000014787	-	92	40.000	ENSGAFG00000008183	si:dkey-34d22.5	78	40.000
ENSGAFG00000014787	-	87	42.529	ENSGAFG00000003642	-	77	43.605
ENSGAFG00000014787	-	70	31.159	ENSGAFG00000005872	arl3	74	31.159
ENSGAFG00000014787	-	79	44.304	ENSGAFG00000019872	rab41	75	44.304
ENSGAFG00000014787	-	81	37.037	ENSGAFG00000021765	kras	98	35.233
ENSGAFG00000014787	-	83	33.918	ENSGAFG00000000629	RAB29	83	33.918
ENSGAFG00000014787	-	88	37.430	ENSGAFG00000021688	-	86	37.430
ENSGAFG00000014787	-	84	48.214	ENSGAFG00000006846	rab2a	79	48.214
ENSGAFG00000014787	-	77	30.128	ENSGAFG00000010126	rasd4	74	30.128
ENSGAFG00000014787	-	84	38.728	ENSGAFG00000004099	rab9b	76	38.728
ENSGAFG00000014787	-	86	44.767	ENSGAFG00000005477	rab4a	81	44.767
ENSGAFG00000014787	-	97	53.368	ENSGAFG00000019305	rab1ba	92	53.368
ENSGAFG00000014787	-	82	48.447	ENSGAFG00000005679	rab11ba	74	48.447
ENSGAFG00000014787	-	96	32.812	ENSGAFG00000021738	rhebl1	96	32.812
ENSGAFG00000014787	-	96	38.021	ENSGAFG00000021202	zgc:101559	79	38.021
ENSGAFG00000014787	-	98	52.525	ENSGAFG00000001289	rab1ab	98	52.525
ENSGAFG00000014787	-	84	36.257	ENSGAFG00000020102	si:dkey-13a21.4	83	36.257
ENSGAFG00000014787	-	79	44.937	ENSGAFG00000017270	rab6ba	76	44.937
ENSGAFG00000014787	-	88	34.078	ENSGAFG00000021814	hrasb	94	34.078
ENSGAFG00000014787	-	70	30.216	ENSGAFG00000018703	arf5	73	30.216
ENSGAFG00000014787	-	82	48.171	ENSGAFG00000008560	rab18b	80	48.171
ENSGAFG00000014787	-	91	47.253	ENSGAFG00000005388	si:dkey-16l2.16	87	47.253
ENSGAFG00000014787	-	81	32.749	ENSGAFG00000014541	rras2	81	32.749
ENSGAFG00000014787	-	80	44.512	ENSGAFG00000015490	rab33a	59	44.512
ENSGAFG00000014787	-	85	43.605	ENSGAFG00000006932	-	81	43.605
ENSGAFG00000014787	-	96	34.021	ENSGAFG00000010541	rras	96	34.021
ENSGAFG00000014787	-	90	34.225	ENSGAFG00000007684	rab23	95	34.343
ENSGAFG00000014787	-	77	36.601	ENSGAFG00000020906	rheb	84	36.364
ENSGAFG00000014787	-	81	33.140	ENSGAFG00000007473	rasl11a	67	33.333
ENSGAFG00000014787	-	90	44.865	ENSGAFG00000002790	rab18a	90	44.444

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014787	-	100	92.000	ENSAPOG00000001040	-	100	92.000	Acanthochromis_polyacanthus
ENSGAFG00000014787	-	100	64.677	ENSACIG00000003157	-	100	64.677	Amphilophus_citrinellus
ENSGAFG00000014787	-	100	92.000	ENSAOCG00000015908	-	100	92.000	Amphiprion_ocellaris
ENSGAFG00000014787	-	100	92.000	ENSAPEG00000004121	-	100	92.000	Amphiprion_percula
ENSGAFG00000014787	-	100	90.000	ENSATEG00000023662	-	100	90.000	Anabas_testudineus
ENSGAFG00000014787	-	100	91.000	ENSACLG00000019643	-	100	91.000	Astatotilapia_calliptera
ENSGAFG00000014787	-	100	95.500	ENSCVAG00000022649	-	100	95.500	Cyprinodon_variegatus
ENSGAFG00000014787	-	86	72.093	ENSDARG00000103934	megf8	99	72.093	Danio_rerio
ENSGAFG00000014787	-	100	91.000	ENSHBUG00000003728	-	100	91.000	Haplochromis_burtoni
ENSGAFG00000014787	-	100	91.000	ENSMZEG00005015817	-	100	91.000	Maylandia_zebra
ENSGAFG00000014787	-	100	93.000	ENSMMOG00000003924	-	100	93.000	Mola_mola
ENSGAFG00000014787	-	100	92.000	ENSMALG00000020807	-	100	92.000	Monopterus_albus
ENSGAFG00000014787	-	55	90.741	ENSOPRG00000014416	-	100	90.741	Ochotona_princeps
ENSGAFG00000014787	-	100	87.500	ENSORLG00000025395	-	100	87.500	Oryzias_latipes
ENSGAFG00000014787	-	100	87.500	ENSORLG00020009535	-	100	87.500	Oryzias_latipes_hni
ENSGAFG00000014787	-	100	88.000	ENSORLG00015015518	-	100	88.000	Oryzias_latipes_hsok
ENSGAFG00000014787	-	100	85.572	ENSPKIG00000014528	-	100	85.572	Paramormyrops_kingsleyae
ENSGAFG00000014787	-	100	97.500	ENSPFOG00000014418	-	100	97.500	Poecilia_formosa
ENSGAFG00000014787	-	100	97.500	ENSPLAG00000003181	-	100	97.500	Poecilia_latipinna
ENSGAFG00000014787	-	100	97.500	ENSPMEG00000008020	-	100	97.500	Poecilia_mexicana
ENSGAFG00000014787	-	100	97.500	ENSPMEG00000022988	-	100	97.500	Poecilia_mexicana
ENSGAFG00000014787	-	100	90.500	ENSPNYG00000004681	-	100	90.500	Pundamilia_nyererei
ENSGAFG00000014787	-	100	86.000	ENSSFOG00015021754	rab13	100	86.000	Scleropages_formosus
ENSGAFG00000014787	-	100	64.734	ENSSMAG00000002569	-	100	64.734	Scophthalmus_maximus
ENSGAFG00000014787	-	100	90.500	ENSSMAG00000016376	-	100	90.500	Scophthalmus_maximus
ENSGAFG00000014787	-	100	92.500	ENSSDUG00000006307	-	100	92.500	Seriola_dumerili
ENSGAFG00000014787	-	100	92.500	ENSSLDG00000015823	-	100	92.500	Seriola_lalandi_dorsalis
ENSGAFG00000014787	-	100	92.500	ENSSPAG00000022440	-	100	92.500	Stegastes_partitus
ENSGAFG00000014787	-	100	89.500	ENSTNIG00000018319	-	100	89.500	Tetraodon_nigroviridis
ENSGAFG00000014787	-	100	98.500	ENSXMAG00000016094	-	100	98.500	Xiphophorus_maculatus