EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000014868 (Gene tree)
Gene ID: -
Gene Symbol: a1cf
Alias: acf
Full Name: apobec1 complementation factor
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 7384 bases
Position: chrNHOQ01001904.1:12235881-12243264
Accession: ZDB-GENE-060824-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000022031	RRM_1	PF00076.22	5.8e-39	1	3
ENSGAFP00000022031	RRM_1	PF00076.22	5.8e-39	2	3
ENSGAFP00000022031	RRM_1	PF00076.22	5.8e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022243	-	1701	-	ENSGAFP00000022031	566 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000014868's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014868's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000014868	a1cf	51	54.266	ENSGAFG00000007783	syncripl	53	53.584
ENSGAFG00000014868	a1cf	50	67.018	ENSGAFG00000020245	rbm46	66	67.018
ENSGAFG00000014868	a1cf	60	67.059	ENSGAFG00000020571	rbm47	80	70.957

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000014868	a1cf	100	71.667	ENSG00000148584	A1CF	100	87.129	Homo_sapiens
ENSGAFG00000014868	a1cf	100	79.236	ENSAPOG00000008259	a1cf	100	78.904	Acanthochromis_polyacanthus
ENSGAFG00000014868	a1cf	100	70.066	ENSAMEG00000000523	A1CF	100	69.901	Ailuropoda_melanoleuca
ENSGAFG00000014868	a1cf	100	81.713	ENSACIG00000008632	a1cf	100	82.208	Amphilophus_citrinellus
ENSGAFG00000014868	a1cf	100	80.629	ENSAOCG00000023744	a1cf	97	89.744	Amphiprion_ocellaris
ENSGAFG00000014868	a1cf	100	79.412	ENSAPEG00000009537	a1cf	100	79.805	Amphiprion_percula
ENSGAFG00000014868	a1cf	100	83.168	ENSATEG00000013720	a1cf	100	83.333	Anabas_testudineus
ENSGAFG00000014868	a1cf	100	70.559	ENSAPLG00000002964	A1CF	100	70.395	Anas_platyrhynchos
ENSGAFG00000014868	a1cf	100	71.595	ENSACAG00000015269	A1CF	100	71.000	Anolis_carolinensis
ENSGAFG00000014868	a1cf	100	72.333	ENSANAG00000019974	A1CF	100	71.333	Aotus_nancymaae
ENSGAFG00000014868	a1cf	100	77.595	ENSACLG00000017428	a1cf	100	78.913	Astatotilapia_calliptera
ENSGAFG00000014868	a1cf	100	69.218	ENSAMXG00000018180	a1cf	100	69.218	Astyanax_mexicanus
ENSGAFG00000014868	a1cf	100	72.167	ENSBTAG00000021195	A1CF	100	71.636	Bos_taurus
ENSGAFG00000014868	a1cf	100	71.382	ENSCJAG00000005045	A1CF	100	70.395	Callithrix_jacchus
ENSGAFG00000014868	a1cf	100	70.066	ENSCAFG00000015581	A1CF	100	69.243	Canis_familiaris
ENSGAFG00000014868	a1cf	100	70.066	ENSCAFG00020026421	A1CF	98	82.000	Canis_lupus_dingo
ENSGAFG00000014868	a1cf	100	71.546	ENSCHIG00000020411	A1CF	100	70.724	Capra_hircus
ENSGAFG00000014868	a1cf	94	71.025	ENSTSYG00000001755	A1CF	100	71.378	Carlito_syrichta
ENSGAFG00000014868	a1cf	100	73.178	ENSCAPG00000017386	A1CF	100	75.080	Cavia_aperea
ENSGAFG00000014868	a1cf	100	70.559	ENSCPOG00000009807	A1CF	100	69.079	Cavia_porcellus
ENSGAFG00000014868	a1cf	100	71.217	ENSCCAG00000018168	A1CF	100	70.230	Cebus_capucinus
ENSGAFG00000014868	a1cf	100	71.833	ENSCATG00000043715	A1CF	100	70.833	Cercocebus_atys
ENSGAFG00000014868	a1cf	100	70.066	ENSCLAG00000010424	A1CF	100	69.079	Chinchilla_lanigera
ENSGAFG00000014868	a1cf	100	70.888	ENSCSAG00000007032	A1CF	100	69.901	Chlorocebus_sabaeus
ENSGAFG00000014868	a1cf	97	68.908	ENSCHOG00000009089	A1CF	98	67.899	Choloepus_hoffmanni
ENSGAFG00000014868	a1cf	100	71.217	ENSCPBG00000026464	A1CF	100	70.724	Chrysemys_picta_bellii
ENSGAFG00000014868	a1cf	100	71.053	ENSCANG00000038032	A1CF	100	70.066	Colobus_angolensis_palliatus
ENSGAFG00000014868	a1cf	100	70.559	ENSCGRG00001017413	A1cf	100	69.572	Cricetulus_griseus_chok1gshd
ENSGAFG00000014868	a1cf	100	69.901	ENSCGRG00000017332	A1cf	100	69.243	Cricetulus_griseus_crigri
ENSGAFG00000014868	a1cf	100	77.578	ENSCSEG00000002361	a1cf	100	77.578	Cynoglossus_semilaevis
ENSGAFG00000014868	a1cf	100	88.119	ENSCVAG00000010520	a1cf	100	88.119	Cyprinodon_variegatus
ENSGAFG00000014868	a1cf	100	76.744	ENSDARG00000002968	a1cf	100	76.744	Danio_rerio
ENSGAFG00000014868	a1cf	100	70.888	ENSDNOG00000002829	A1CF	100	69.901	Dasypus_novemcinctus
ENSGAFG00000014868	a1cf	81	84.058	ENSETEG00000012527	A1CF	81	84.058	Echinops_telfairi
ENSGAFG00000014868	a1cf	100	70.936	ENSEASG00005012924	A1CF	100	70.115	Equus_asinus_asinus
ENSGAFG00000014868	a1cf	100	70.772	ENSECAG00000010424	A1CF	100	69.951	Equus_caballus
ENSGAFG00000014868	a1cf	77	64.968	ENSEEUG00000000013	A1CF	97	64.758	Erinaceus_europaeus
ENSGAFG00000014868	a1cf	100	74.918	ENSELUG00000003159	a1cf	100	74.918	Esox_lucius
ENSGAFG00000014868	a1cf	100	71.000	ENSFCAG00000011179	A1CF	100	70.500	Felis_catus
ENSGAFG00000014868	a1cf	100	72.333	ENSFALG00000013183	A1CF	100	71.167	Ficedula_albicollis
ENSGAFG00000014868	a1cf	100	71.833	ENSFDAG00000019371	A1CF	100	70.833	Fukomys_damarensis
ENSGAFG00000014868	a1cf	100	80.033	ENSFHEG00000019652	a1cf	96	96.094	Fundulus_heteroclitus
ENSGAFG00000014868	a1cf	100	72.414	ENSGMOG00000018943	a1cf	100	71.429	Gadus_morhua
ENSGAFG00000014868	a1cf	95	69.811	ENSGALG00000003765	A1CF	98	69.640	Gallus_gallus
ENSGAFG00000014868	a1cf	100	78.197	ENSGACG00000010241	a1cf	100	78.525	Gasterosteus_aculeatus
ENSGAFG00000014868	a1cf	96	69.744	ENSGAGG00000016508	A1CF	98	69.231	Gopherus_agassizii
ENSGAFG00000014868	a1cf	100	70.724	ENSGGOG00000009670	A1CF	100	69.737	Gorilla_gorilla
ENSGAFG00000014868	a1cf	100	81.219	ENSHBUG00000021959	a1cf	100	82.372	Haplochromis_burtoni
ENSGAFG00000014868	a1cf	100	71.217	ENSHGLG00000008955	A1CF	100	70.066	Heterocephalus_glaber_female
ENSGAFG00000014868	a1cf	100	70.559	ENSHGLG00100000518	A1CF	100	69.408	Heterocephalus_glaber_male
ENSGAFG00000014868	a1cf	100	68.123	ENSHCOG00000017669	a1cf	100	69.903	Hippocampus_comes
ENSGAFG00000014868	a1cf	88	76.296	ENSIPUG00000010367	a1cf	99	74.867	Ictalurus_punctatus
ENSGAFG00000014868	a1cf	100	81.848	ENSKMAG00000006568	a1cf	100	82.496	Kryptolebias_marmoratus
ENSGAFG00000014868	a1cf	99	81.596	ENSLBEG00000020994	a1cf	99	81.433	Labrus_bergylta
ENSGAFG00000014868	a1cf	100	73.256	ENSLACG00000008061	A1CF	100	72.093	Latimeria_chalumnae
ENSGAFG00000014868	a1cf	100	75.246	ENSLOCG00000006302	a1cf	100	74.262	Lepisosteus_oculatus
ENSGAFG00000014868	a1cf	100	71.382	ENSLAFG00000015462	A1CF	100	70.888	Loxodonta_africana
ENSGAFG00000014868	a1cf	100	72.000	ENSMFAG00000035948	A1CF	100	71.000	Macaca_fascicularis
ENSGAFG00000014868	a1cf	100	72.000	ENSMMUG00000007077	A1CF	100	71.000	Macaca_mulatta
ENSGAFG00000014868	a1cf	100	71.833	ENSMNEG00000031454	A1CF	100	70.833	Macaca_nemestrina
ENSGAFG00000014868	a1cf	100	70.888	ENSMLEG00000037223	A1CF	100	69.901	Mandrillus_leucophaeus
ENSGAFG00000014868	a1cf	100	81.592	ENSMAMG00000010402	a1cf	100	81.758	Mastacembelus_armatus
ENSGAFG00000014868	a1cf	100	78.525	ENSMZEG00005013245	a1cf	100	78.525	Maylandia_zebra
ENSGAFG00000014868	a1cf	100	70.279	ENSMGAG00000001507	A1CF	100	70.115	Meleagris_gallopavo
ENSGAFG00000014868	a1cf	100	70.164	ENSMAUG00000007422	A1cf	100	69.344	Mesocricetus_auratus
ENSGAFG00000014868	a1cf	100	70.930	ENSMICG00000003377	A1CF	100	70.764	Microcebus_murinus
ENSGAFG00000014868	a1cf	100	70.066	ENSMOCG00000021536	A1cf	100	69.079	Microtus_ochrogaster
ENSGAFG00000014868	a1cf	100	73.630	ENSMMOG00000009422	a1cf	100	74.658	Mola_mola
ENSGAFG00000014868	a1cf	88	72.693	ENSMODG00000016478	A1CF	97	72.316	Monodelphis_domestica
ENSGAFG00000014868	a1cf	100	77.604	ENSMALG00000012992	a1cf	100	77.604	Monopterus_albus
ENSGAFG00000014868	a1cf	100	71.429	MGP_CAROLIEiJ_G0022873	A1cf	100	70.432	Mus_caroli
ENSGAFG00000014868	a1cf	100	71.429	ENSMUSG00000052595	A1cf	99	82.338	Mus_musculus
ENSGAFG00000014868	a1cf	100	70.598	MGP_PahariEiJ_G0014366	A1cf	100	69.601	Mus_pahari
ENSGAFG00000014868	a1cf	100	71.429	MGP_SPRETEiJ_G0023792	A1cf	100	70.432	Mus_spretus
ENSGAFG00000014868	a1cf	100	65.625	ENSMPUG00000016971	A1CF	100	64.803	Mustela_putorius_furo
ENSGAFG00000014868	a1cf	100	71.311	ENSMLUG00000016071	A1CF	100	70.164	Myotis_lucifugus
ENSGAFG00000014868	a1cf	100	71.053	ENSNGAG00000015136	A1cf	100	70.066	Nannospalax_galili
ENSGAFG00000014868	a1cf	100	81.384	ENSNBRG00000001712	a1cf	100	82.537	Neolamprologus_brichardi
ENSGAFG00000014868	a1cf	100	71.217	ENSNLEG00000012028	A1CF	100	70.230	Nomascus_leucogenys
ENSGAFG00000014868	a1cf	94	71.201	ENSMEUG00000015909	A1CF	100	71.201	Notamacropus_eugenii
ENSGAFG00000014868	a1cf	87	63.551	ENSOPRG00000010667	A1CF	100	61.221	Ochotona_princeps
ENSGAFG00000014868	a1cf	100	81.054	ENSONIG00000019105	a1cf	100	82.208	Oreochromis_niloticus
ENSGAFG00000014868	a1cf	83	79.149	ENSOANG00000007360	A1CF	99	79.149	Ornithorhynchus_anatinus
ENSGAFG00000014868	a1cf	100	71.000	ENSOCUG00000011587	A1CF	100	70.000	Oryctolagus_cuniculus
ENSGAFG00000014868	a1cf	100	77.362	ENSORLG00000013342	a1cf	100	77.036	Oryzias_latipes
ENSGAFG00000014868	a1cf	100	79.675	ENSORLG00020000586	a1cf	100	80.000	Oryzias_latipes_hni
ENSGAFG00000014868	a1cf	100	79.675	ENSORLG00015018569	a1cf	100	80.000	Oryzias_latipes_hsok
ENSGAFG00000014868	a1cf	100	81.126	ENSOMEG00000013531	a1cf	100	81.126	Oryzias_melastigma
ENSGAFG00000014868	a1cf	100	69.737	ENSOGAG00000012884	A1CF	100	69.737	Otolemur_garnettii
ENSGAFG00000014868	a1cf	100	71.217	ENSOARG00000013695	A1CF	100	70.395	Ovis_aries
ENSGAFG00000014868	a1cf	97	68.930	ENSPPAG00000028115	A1CF	95	76.033	Pan_paniscus
ENSGAFG00000014868	a1cf	100	70.066	ENSPPRG00000012180	A1CF	100	69.572	Panthera_pardus
ENSGAFG00000014868	a1cf	100	70.066	ENSPTIG00000021223	A1CF	100	69.572	Panthera_tigris_altaica
ENSGAFG00000014868	a1cf	100	71.667	ENSPTRG00000002508	A1CF	100	70.667	Pan_troglodytes
ENSGAFG00000014868	a1cf	100	72.000	ENSPANG00000021988	A1CF	100	71.000	Papio_anubis
ENSGAFG00000014868	a1cf	100	74.262	ENSPKIG00000025176	a1cf	100	74.262	Paramormyrops_kingsleyae
ENSGAFG00000014868	a1cf	100	72.333	ENSPSIG00000010318	A1CF	100	71.833	Pelodiscus_sinensis
ENSGAFG00000014868	a1cf	98	66.212	ENSPMGG00000013359	a1cf	99	66.610	Periophthalmus_magnuspinnatus
ENSGAFG00000014868	a1cf	100	70.724	ENSPEMG00000015021	A1cf	100	69.737	Peromyscus_maniculatus_bairdii
ENSGAFG00000014868	a1cf	100	72.000	ENSPCIG00000002175	A1CF	100	72.000	Phascolarctos_cinereus
ENSGAFG00000014868	a1cf	100	88.111	ENSPFOG00000007437	-	100	89.088	Poecilia_formosa
ENSGAFG00000014868	a1cf	100	88.111	ENSPFOG00000006683	a1cf	100	88.599	Poecilia_formosa
ENSGAFG00000014868	a1cf	100	89.109	ENSPLAG00000001210	-	100	90.099	Poecilia_latipinna
ENSGAFG00000014868	a1cf	100	89.109	ENSPLAG00000000026	a1cf	100	90.099	Poecilia_latipinna
ENSGAFG00000014868	a1cf	100	81.000	ENSPMEG00000015529	-	100	81.000	Poecilia_mexicana
ENSGAFG00000014868	a1cf	100	82.095	ENSPMEG00000000921	a1cf	100	82.095	Poecilia_mexicana
ENSGAFG00000014868	a1cf	100	87.785	ENSPREG00000016298	a1cf	100	88.274	Poecilia_reticulata
ENSGAFG00000014868	a1cf	100	72.167	ENSPPYG00000002819	A1CF	100	71.167	Pongo_abelii
ENSGAFG00000014868	a1cf	69	68.000	ENSPCAG00000006463	A1CF	64	68.000	Procavia_capensis
ENSGAFG00000014868	a1cf	100	70.230	ENSPCOG00000024172	A1CF	100	69.901	Propithecus_coquereli
ENSGAFG00000014868	a1cf	100	80.488	ENSPNYG00000017944	a1cf	100	81.626	Pundamilia_nyererei
ENSGAFG00000014868	a1cf	100	77.152	ENSPNAG00000007704	a1cf	100	77.318	Pygocentrus_nattereri
ENSGAFG00000014868	a1cf	100	71.333	ENSRNOG00000033195	A1cf	100	70.333	Rattus_norvegicus
ENSGAFG00000014868	a1cf	100	66.831	ENSRBIG00000042892	A1CF	100	67.767	Rhinopithecus_bieti
ENSGAFG00000014868	a1cf	100	71.053	ENSRROG00000041398	A1CF	100	70.066	Rhinopithecus_roxellana
ENSGAFG00000014868	a1cf	100	71.546	ENSSBOG00000021930	A1CF	100	70.559	Saimiri_boliviensis_boliviensis
ENSGAFG00000014868	a1cf	100	71.167	ENSSHAG00000005096	A1CF	100	71.167	Sarcophilus_harrisii
ENSGAFG00000014868	a1cf	100	76.159	ENSSFOG00015011774	a1cf	100	76.325	Scleropages_formosus
ENSGAFG00000014868	a1cf	100	79.545	ENSSMAG00000013271	a1cf	100	80.032	Scophthalmus_maximus
ENSGAFG00000014868	a1cf	100	81.475	ENSSDUG00000013930	a1cf	100	81.475	Seriola_dumerili
ENSGAFG00000014868	a1cf	100	79.690	ENSSLDG00000004290	a1cf	100	79.181	Seriola_lalandi_dorsalis
ENSGAFG00000014868	a1cf	95	63.445	ENSSARG00000005940	A1CF	95	62.214	Sorex_araneus
ENSGAFG00000014868	a1cf	96	67.572	ENSSPUG00000006797	A1CF	95	67.241	Sphenodon_punctatus
ENSGAFG00000014868	a1cf	100	71.382	ENSSSCG00000010431	A1CF	100	70.395	Sus_scrofa
ENSGAFG00000014868	a1cf	100	71.593	ENSTGUG00000005090	A1CF	100	70.279	Taeniopygia_guttata
ENSGAFG00000014868	a1cf	100	78.862	ENSTRUG00000001982	a1cf	100	79.187	Takifugu_rubripes
ENSGAFG00000014868	a1cf	100	78.247	ENSTNIG00000003580	a1cf	100	78.247	Tetraodon_nigroviridis
ENSGAFG00000014868	a1cf	95	67.663	ENSTTRG00000013190	A1CF	94	66.608	Tursiops_truncatus
ENSGAFG00000014868	a1cf	100	71.667	ENSUAMG00000020065	A1CF	100	70.667	Ursus_americanus
ENSGAFG00000014868	a1cf	100	70.230	ENSUMAG00000011162	A1CF	100	69.243	Ursus_maritimus
ENSGAFG00000014868	a1cf	86	68.061	ENSVPAG00000006130	A1CF	86	66.920	Vicugna_pacos
ENSGAFG00000014868	a1cf	100	71.333	ENSVVUG00000002504	A1CF	100	70.333	Vulpes_vulpes
ENSGAFG00000014868	a1cf	100	66.118	ENSXETG00000006611	a1cf	100	66.118	Xenopus_tropicalis
ENSGAFG00000014868	a1cf	100	91.362	ENSXCOG00000003302	a1cf	100	90.864	Xiphophorus_couchianus
ENSGAFG00000014868	a1cf	100	90.164	ENSXMAG00000016703	a1cf	100	90.164	Xiphophorus_maculatus