EuRBPDB

  • Home
  • Cancer
  • Family
  • Species
  • RBPredictor
  • Search
  • Download
  • Submit
  • Help
  • Contact

  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSGAFG00000014900 (Gene tree)
Gene ID
-
Gene Symbol
smarca4a
Alias
brahma-related gene 1|brg1|smarca2|smarca4|wu:fb51a08|yng|young
Full Name
SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 4a
Gene Type
protein_coding
Species
Gambusia_affinis
Status
putative
Strand
Plus strand
Length
17433 bases
Position
chrNHOQ01002686.1:1192430-1209862
Accession
ZDB-GENE-030605-1
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSGAFP00000022101ResIIIPF04851.155.5e-0911
ENSGAFP00000022089ResIIIPF04851.156e-0911
ENSGAFP00000022101BRKPF07533.165.6e-1711
ENSGAFP00000022089BRKPF07533.165.8e-1711
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSGAFT00000022301-5458-ENSGAFP000000220891485 (aa)--
ENSGAFT00000022313-4323-ENSGAFP000000221011440 (aa)--
Gene Model
Click here to download ENSGAFG00000014900's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000014900's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSGAFG00000014900smarca4a9471.103ENSGAFG00000001164SMARCA28088.889
ENSGAFG00000014900smarca4a9685.683ENSGAFG00000008827-8886.117
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSGAFG00000014900smarca4a9988.655ENSG00000127616SMARCA499100.000Homo_sapiens
ENSGAFG00000014900smarca4a8591.974ENSAPOG00000003509smarca4a9989.756Acanthochromis_polyacanthus
ENSGAFG00000014900smarca4a9288.607ENSAPOG00000004542SMARCA48888.727Acanthochromis_polyacanthus
ENSGAFG00000014900smarca4a9983.984ENSAMEG00000010868SMARCA49084.280Ailuropoda_melanoleuca
ENSGAFG00000014900smarca4a9485.415ENSACIG00000003035-8788.328Amphilophus_citrinellus
ENSGAFG00000014900smarca4a9993.648ENSACIG00000021550smarca4a8992.696Amphilophus_citrinellus
ENSGAFG00000014900smarca4a9188.658ENSAOCG00000009450-8788.823Amphiprion_ocellaris
ENSGAFG00000014900smarca4a8791.812ENSAOCG00000019167smarca4a8991.660Amphiprion_ocellaris
ENSGAFG00000014900smarca4a9787.406ENSAPEG00000023108-8787.278Amphiprion_percula
ENSGAFG00000014900smarca4a8791.892ENSAPEG00000015559smarca4a8991.739Amphiprion_percula
ENSGAFG00000014900smarca4a10092.328ENSATEG00000011524smarca4a9092.261Anabas_testudineus
ENSGAFG00000014900smarca4a9985.369ENSATEG00000001094-8687.236Anabas_testudineus
ENSGAFG00000014900smarca4a9788.514ENSANAG00000036991SMARCA49084.565Aotus_nancymaae
ENSGAFG00000014900smarca4a9794.502ENSACLG00000000163smarca4a8893.768Astatotilapia_calliptera
ENSGAFG00000014900smarca4a9486.613ENSACLG00000008638-8391.091Astatotilapia_calliptera
ENSGAFG00000014900smarca4a9188.766ENSAMXG00000011238-8888.583Astyanax_mexicanus
ENSGAFG00000014900smarca4a9786.879ENSAMXG00000021023smarca4a8887.050Astyanax_mexicanus
ENSGAFG00000014900smarca4a9988.187ENSBTAG00000019220SMARCA48988.353Bos_taurus
ENSGAFG00000014900smarca4a9984.135ENSCJAG00000005936SMARCA49084.565Callithrix_jacchus
ENSGAFG00000014900smarca4a9988.459ENSCAFG00000017584SMARCA49088.835Canis_familiaris
ENSGAFG00000014900smarca4a9988.459ENSCAFG00020024620SMARCA48888.835Canis_lupus_dingo
ENSGAFG00000014900smarca4a9983.729ENSCHIG00000015318SMARCA48983.964Capra_hircus
ENSGAFG00000014900smarca4a9988.192ENSTSYG00000012966SMARCA49088.919Carlito_syrichta
ENSGAFG00000014900smarca4a9382.689ENSCAPG00000015932SMARCA47990.418Cavia_aperea
ENSGAFG00000014900smarca4a9988.391ENSCPOG00000015549SMARCA49088.835Cavia_porcellus
ENSGAFG00000014900smarca4a9984.875ENSCCAG00000031660SMARCA48985.401Cebus_capucinus
ENSGAFG00000014900smarca4a9988.595ENSCATG00000029530SMARCA49088.973Cercocebus_atys
ENSGAFG00000014900smarca4a9988.043ENSCLAG00000011946SMARCA48988.276Chinchilla_lanigera
ENSGAFG00000014900smarca4a9987.669ENSCPBG00000009994SMARCA49088.514Chrysemys_picta_bellii
ENSGAFG00000014900smarca4a9988.527ENSCANG00000036013SMARCA49088.904Colobus_angolensis_palliatus
ENSGAFG00000014900smarca4a9988.323ENSCGRG00001016732Smarca49088.697Cricetulus_griseus_chok1gshd
ENSGAFG00000014900smarca4a9988.323ENSCGRG00000017242Smarca49088.697Cricetulus_griseus_crigri
ENSGAFG00000014900smarca4a9992.770ENSCSEG00000014771smarca4a9091.992Cynoglossus_semilaevis
ENSGAFG00000014900smarca4a9996.005ENSCVAG00000006979smarca4a9196.005Cyprinodon_variegatus
ENSGAFG00000014900smarca4a9685.924ENSCVAG00000003018-8885.734Cyprinodon_variegatus
ENSGAFG00000014900smarca4a9287.345ENSDARG00000104339SMARCA48687.254Danio_rerio
ENSGAFG00000014900smarca4a9790.117ENSDARG00000077226smarca4a8889.648Danio_rerio
ENSGAFG00000014900smarca4a9382.003ENSDNOG00000048847SMARCA49091.333Dasypus_novemcinctus
ENSGAFG00000014900smarca4a8185.773ENSDORG00000002544Smarca48285.243Dipodomys_ordii
ENSGAFG00000014900smarca4a9276.065ENSETEG00000013361SMARCA48375.974Echinops_telfairi
ENSGAFG00000014900smarca4a9988.391ENSEASG00005006167SMARCA48888.697Equus_asinus_asinus
ENSGAFG00000014900smarca4a9988.459ENSECAG00000008334SMARCA49088.766Equus_caballus
ENSGAFG00000014900smarca4a9882.130ENSELUG00000023232-9182.504Esox_lucius
ENSGAFG00000014900smarca4a9990.014ENSELUG00000010247smarca4a9089.099Esox_lucius
ENSGAFG00000014900smarca4a9988.415ENSFCAG00000004894SMARCA49088.790Felis_catus
ENSGAFG00000014900smarca4a8290.924ENSFALG00000004208SMARCA48586.880Ficedula_albicollis
ENSGAFG00000014900smarca4a9088.574ENSFDAG00000012237SMARCA48689.142Fukomys_damarensis
ENSGAFG00000014900smarca4a9788.280ENSFHEG00000007902-8787.868Fundulus_heteroclitus
ENSGAFG00000014900smarca4a10096.381ENSFHEG00000010182smarca4a9196.381Fundulus_heteroclitus
ENSGAFG00000014900smarca4a9280.274ENSGMOG00000005756-8079.485Gadus_morhua
ENSGAFG00000014900smarca4a9087.730ENSGMOG00000002649smarca4a8588.095Gadus_morhua
ENSGAFG00000014900smarca4a7087.728ENSGALG00000047145SMARCA48688.714Gallus_gallus
ENSGAFG00000014900smarca4a10090.543ENSGACG00000006691smarca4a9190.007Gasterosteus_aculeatus
ENSGAFG00000014900smarca4a9780.841ENSGACG00000016033-8980.787Gasterosteus_aculeatus
ENSGAFG00000014900smarca4a9987.916ENSGAGG00000016757SMARCA48988.766Gopherus_agassizii
ENSGAFG00000014900smarca4a9988.595ENSGGOG00000009882SMARCA49088.973Gorilla_gorilla
ENSGAFG00000014900smarca4a9993.515ENSHBUG00000021172smarca4a9092.603Haplochromis_burtoni
ENSGAFG00000014900smarca4a9788.061ENSHBUG00000005447-8787.939Haplochromis_burtoni
ENSGAFG00000014900smarca4a9988.311ENSHGLG00000010519SMARCA49088.996Heterocephalus_glaber_female
ENSGAFG00000014900smarca4a9987.475ENSHGLG00100013774SMARCA48987.766Heterocephalus_glaber_male
ENSGAFG00000014900smarca4a9492.664ENSHCOG00000009510smarca4a8792.182Hippocampus_comes
ENSGAFG00000014900smarca4a9985.531ENSIPUG00000016346-8986.579Ictalurus_punctatus
ENSGAFG00000014900smarca4a10089.008ENSIPUG00000006107smarca4a9188.539Ictalurus_punctatus
ENSGAFG00000014900smarca4a9988.459ENSSTOG00000007939SMARCA49088.835Ictidomys_tridecemlineatus
ENSGAFG00000014900smarca4a9986.388ENSJJAG00000012877Smarca49184.783Jaculus_jaculus
ENSGAFG00000014900smarca4a10093.338ENSKMAG00000011931smarca4a9094.380Kryptolebias_marmoratus
ENSGAFG00000014900smarca4a9787.852ENSKMAG00000019518-8888.840Kryptolebias_marmoratus
ENSGAFG00000014900smarca4a9488.193ENSLBEG00000017383smarca4a8787.190Labrus_bergylta
ENSGAFG00000014900smarca4a9282.243ENSLBEG00000020655-8682.243Labrus_bergylta
ENSGAFG00000014900smarca4a5482.192ENSLACG00000015309SMARCA49481.749Latimeria_chalumnae
ENSGAFG00000014900smarca4a9984.214ENSLOCG00000007820smarca4a9084.115Lepisosteus_oculatus
ENSGAFG00000014900smarca4a9988.415ENSLAFG00000001433SMARCA49088.790Loxodonta_africana
ENSGAFG00000014900smarca4a9988.595ENSMFAG00000032146SMARCA48988.973Macaca_fascicularis
ENSGAFG00000014900smarca4a9988.595ENSMMUG00000012042SMARCA49592.242Macaca_mulatta
ENSGAFG00000014900smarca4a9988.391ENSMNEG00000028512SMARCA49088.766Macaca_nemestrina
ENSGAFG00000014900smarca4a9988.527ENSMLEG00000034976SMARCA49088.721Mandrillus_leucophaeus
ENSGAFG00000014900smarca4a9993.653ENSMAMG00000009256smarca4a9092.530Mastacembelus_armatus
ENSGAFG00000014900smarca4a9687.074ENSMAMG00000002841-8888.621Mastacembelus_armatus
ENSGAFG00000014900smarca4a9288.881ENSMZEG00005023861-8488.767Maylandia_zebra
ENSGAFG00000014900smarca4a9993.342ENSMZEG00005003889smarca4a9092.473Maylandia_zebra
ENSGAFG00000014900smarca4a9988.008ENSMAUG00000020731Smarca49088.308Mesocricetus_auratus
ENSGAFG00000014900smarca4a9988.347ENSMICG00000009806SMARCA49088.721Microcebus_murinus
ENSGAFG00000014900smarca4a9987.940ENSMOCG00000022209Smarca49088.308Microtus_ochrogaster
ENSGAFG00000014900smarca4a9490.779ENSMMOG00000007571smarca4a8889.118Mola_mola
ENSGAFG00000014900smarca4a9984.266ENSMMOG00000008466-8784.921Mola_mola
ENSGAFG00000014900smarca4a9986.910ENSMODG00000006287SMARCA49086.716Monodelphis_domestica
ENSGAFG00000014900smarca4a8587.611ENSMALG00000021534-8787.449Monopterus_albus
ENSGAFG00000014900smarca4a9993.266ENSMALG00000003388smarca4a9092.328Monopterus_albus
ENSGAFG00000014900smarca4a9988.315MGP_CAROLIEiJ_G0031879Smarca49687.017Mus_caroli
ENSGAFG00000014900smarca4a9988.315ENSMUSG00000032187Smarca49687.017Mus_musculus
ENSGAFG00000014900smarca4a9988.043MGP_PahariEiJ_G0014745Smarca49687.017Mus_pahari
ENSGAFG00000014900smarca4a9988.315MGP_SPRETEiJ_G0033003Smarca49687.017Mus_spretus
ENSGAFG00000014900smarca4a9988.527ENSMPUG00000005711SMARCA49088.904Mustela_putorius_furo
ENSGAFG00000014900smarca4a9988.391ENSMLUG00000004491-9087.416Myotis_lucifugus
ENSGAFG00000014900smarca4a9988.052ENSNGAG00000021852Smarca49088.491Nannospalax_galili
ENSGAFG00000014900smarca4a8886.677ENSNBRG00000018865-8788.178Neolamprologus_brichardi
ENSGAFG00000014900smarca4a9492.178ENSNBRG00000011457smarca4a8692.148Neolamprologus_brichardi
ENSGAFG00000014900smarca4a9982.541ENSNLEG00000012389SMARCA48486.267Nomascus_leucogenys
ENSGAFG00000014900smarca4a8093.103ENSOPRG00000000885-6793.103Ochotona_princeps
ENSGAFG00000014900smarca4a9985.330ENSODEG00000017127SMARCA48886.231Octodon_degus
ENSGAFG00000014900smarca4a9993.531ENSONIG00000008196smarca4a9093.444Oreochromis_niloticus
ENSGAFG00000014900smarca4a9788.130ENSONIG00000018040-8788.008Oreochromis_niloticus
ENSGAFG00000014900smarca4a9681.577ENSOCUG00000001787SMARCA48781.631Oryctolagus_cuniculus
ENSGAFG00000014900smarca4a10092.194ENSORLG00000015452smarca4a9190.848Oryzias_latipes
ENSGAFG00000014900smarca4a9687.474ENSORLG00000003955-8787.052Oryzias_latipes
ENSGAFG00000014900smarca4a10091.857ENSORLG00020004611smarca4a9190.848Oryzias_latipes_hni
ENSGAFG00000014900smarca4a9687.500ENSORLG00020009728-8786.992Oryzias_latipes_hni
ENSGAFG00000014900smarca4a9687.491ENSORLG00015007739-8786.983Oryzias_latipes_hsok
ENSGAFG00000014900smarca4a10091.723ENSORLG00015016560smarca4a9190.713Oryzias_latipes_hsok
ENSGAFG00000014900smarca4a10092.525ENSOMEG00000007486smarca4a9191.515Oryzias_melastigma
ENSGAFG00000014900smarca4a9787.457ENSOMEG00000016626-8787.388Oryzias_melastigma
ENSGAFG00000014900smarca4a8787.107ENSOGAG00000016148SMARCA48887.881Otolemur_garnettii
ENSGAFG00000014900smarca4a9987.856ENSOARG00000017454SMARCA49088.077Ovis_aries
ENSGAFG00000014900smarca4a9988.595ENSPPAG00000043191SMARCA49088.973Pan_paniscus
ENSGAFG00000014900smarca4a9988.415ENSPPRG00000000064SMARCA49088.790Panthera_pardus
ENSGAFG00000014900smarca4a8885.474ENSPTIG00000017447SMARCA49081.212Panthera_tigris_altaica
ENSGAFG00000014900smarca4a9988.595ENSPTRG00000010488SMARCA49088.973Pan_troglodytes
ENSGAFG00000014900smarca4a9988.459ENSPANG00000011042SMARCA48988.835Papio_anubis
ENSGAFG00000014900smarca4a9987.383ENSPKIG00000007770SMARCA48889.593Paramormyrops_kingsleyae
ENSGAFG00000014900smarca4a9986.886ENSPKIG00000010087-9186.272Paramormyrops_kingsleyae
ENSGAFG00000014900smarca4a9983.366ENSPSIG00000005547SMARCA49083.457Pelodiscus_sinensis
ENSGAFG00000014900smarca4a9988.008ENSPEMG00000020389Smarca49088.377Peromyscus_maniculatus_bairdii
ENSGAFG00000014900smarca4a9988.798ENSPCIG00000017138SMARCA49089.249Phascolarctos_cinereus
ENSGAFG00000014900smarca4a10098.590ENSPFOG00000007892smarca4a9198.590Poecilia_formosa
ENSGAFG00000014900smarca4a9787.989ENSPFOG00000012930-8788.211Poecilia_formosa
ENSGAFG00000014900smarca4a10098.590ENSPLAG00000014294smarca4a9198.590Poecilia_latipinna
ENSGAFG00000014900smarca4a9190.061ENSPLAG00000018616-8888.182Poecilia_latipinna
ENSGAFG00000014900smarca4a9688.600ENSPMEG00000008929-8888.600Poecilia_mexicana
ENSGAFG00000014900smarca4a9698.674ENSPMEG00000003725smarca4a8998.674Poecilia_mexicana
ENSGAFG00000014900smarca4a9684.599ENSPREG00000014823-8884.838Poecilia_reticulata
ENSGAFG00000014900smarca4a10098.193ENSPREG00000014608smarca4a9398.053Poecilia_reticulata
ENSGAFG00000014900smarca4a9986.587ENSPPYG00000009568SMARCA49086.388Pongo_abelii
ENSGAFG00000014900smarca4a7687.333ENSPCAG00000014054SMARCA46591.406Procavia_capensis
ENSGAFG00000014900smarca4a9988.459ENSPCOG00000023011SMARCA49088.652Propithecus_coquereli
ENSGAFG00000014900smarca4a9483.763ENSPVAG00000007787SMARCA48585.792Pteropus_vampyrus
ENSGAFG00000014900smarca4a9485.415ENSPNYG00000023995-8788.253Pundamilia_nyererei
ENSGAFG00000014900smarca4a9991.831ENSPNYG00000000717smarca4a8792.679Pundamilia_nyererei
ENSGAFG00000014900smarca4a9288.832ENSPNAG00000006636-8588.848Pygocentrus_nattereri
ENSGAFG00000014900smarca4a9786.454ENSPNAG00000024136smarca4a8786.595Pygocentrus_nattereri
ENSGAFG00000014900smarca4a9988.247ENSRNOG00000009271Smarca49088.621Rattus_norvegicus
ENSGAFG00000014900smarca4a9988.527ENSRBIG00000038696SMARCA48988.904Rhinopithecus_bieti
ENSGAFG00000014900smarca4a9988.527ENSRROG00000045509SMARCA49088.904Rhinopithecus_roxellana
ENSGAFG00000014900smarca4a9988.451ENSSBOG00000026896SMARCA48888.950Saimiri_boliviensis_boliviensis
ENSGAFG00000014900smarca4a9988.730ENSSHAG00000001642SMARCA49089.318Sarcophilus_harrisii
ENSGAFG00000014900smarca4a9290.120ENSSFOG00015009921-8489.978Scleropages_formosus
ENSGAFG00000014900smarca4a9989.328ENSSFOG00015013823smarca48889.539Scleropages_formosus
ENSGAFG00000014900smarca4a10091.533ENSSMAG00000003200smarca4a9190.533Scophthalmus_maximus
ENSGAFG00000014900smarca4a9784.726ENSSMAG00000014082-8785.021Scophthalmus_maximus
ENSGAFG00000014900smarca4a9787.647ENSSDUG00000005388-8588.205Seriola_dumerili
ENSGAFG00000014900smarca4a9889.795ENSSDUG00000017298smarca4a9088.332Seriola_dumerili
ENSGAFG00000014900smarca4a9993.124ENSSLDG00000024486smarca4a9191.661Seriola_lalandi_dorsalis
ENSGAFG00000014900smarca4a9288.897ENSSLDG00000023663-8789.059Seriola_lalandi_dorsalis
ENSGAFG00000014900smarca4a7095.652ENSSARG00000013477SMARCA48295.652Sorex_araneus
ENSGAFG00000014900smarca4a9384.879ENSSPUG00000004558SMARCA48785.311Sphenodon_punctatus
ENSGAFG00000014900smarca4a9992.857ENSSPAG00000004248smarca4a9191.594Stegastes_partitus
ENSGAFG00000014900smarca4a9887.356ENSSPAG00000012533-8787.483Stegastes_partitus
ENSGAFG00000014900smarca4a9988.482ENSSSCG00000013629SMARCA49088.858Sus_scrofa
ENSGAFG00000014900smarca4a5884.223ENSTGUG00000015488-9884.267Taeniopygia_guttata
ENSGAFG00000014900smarca4a8589.862ENSTRUG00000004885smarca4a8986.824Takifugu_rubripes
ENSGAFG00000014900smarca4a9485.067ENSTRUG00000001378SMARCA48586.715Takifugu_rubripes
ENSGAFG00000014900smarca4a7691.103ENSTNIG00000004859-9691.103Tetraodon_nigroviridis
ENSGAFG00000014900smarca4a9984.339ENSTNIG00000004536SMARCA48985.086Tetraodon_nigroviridis
ENSGAFG00000014900smarca4a9984.993ENSTTRG00000009519SMARCA49084.704Tursiops_truncatus
ENSGAFG00000014900smarca4a9988.527ENSUAMG00000014661SMARCA49088.904Ursus_americanus
ENSGAFG00000014900smarca4a9090.323ENSUMAG00000022005SMARCA49890.751Ursus_maritimus
ENSGAFG00000014900smarca4a9988.459ENSVVUG00000017820SMARCA48788.835Vulpes_vulpes
ENSGAFG00000014900smarca4a9784.030ENSXETG00000009355smarca49082.907Xenopus_tropicalis
ENSGAFG00000014900smarca4a9883.747ENSXCOG00000013494-8787.220Xiphophorus_couchianus
ENSGAFG00000014900smarca4a10099.057ENSXMAG00000006321smarca4a9199.057Xiphophorus_maculatus
ENSGAFG00000014900smarca4a9788.199ENSXMAG00000007030-8887.662Xiphophorus_maculatus

Copyright © , Bioinformatics Center, Sun Yat-sen Memorial Hospital, Sun Yat-sen University, China. All Rights Reserved.

Any comment and suggestion, please contact us