EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000015171 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 20564 bases
Position: chrNHOQ01002364.1:4485526-4506089
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000022462	SAP	PF02037.27	4.7e-10	1	1
ENSGAFP00000022483	SAP	PF02037.27	1.2e-09	1	1
ENSGAFP00000022478	SAP	PF02037.27	2.4e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022684	-	2571	-	ENSGAFP00000022462	856 (aa)	-	-
ENSGAFT00000022705	-	2178	-	ENSGAFP00000022483	725 (aa)	-	-
ENSGAFT00000022700	-	5432	-	ENSGAFP00000022478	1569 (aa)	-	UPI000DD29D32

Gene Model

Click here to download ENSGAFG00000015171's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015171's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000015171	-	53	84.375	ENSGAFG00000003479	acin1b	51	64.626

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015171	-	72	81.081	ENSG00000100813	ACIN1	74	54.721	Homo_sapiens
ENSGAFG00000015171	-	93	81.401	ENSAPOG00000015331	-	64	59.495	Acanthochromis_polyacanthus
ENSGAFG00000015171	-	72	81.905	ENSAPOG00000019226	acin1b	56	73.387	Acanthochromis_polyacanthus
ENSGAFG00000015171	-	94	77.171	ENSACIG00000006218	acin1a	86	77.518	Amphilophus_citrinellus
ENSGAFG00000015171	-	93	81.643	ENSAOCG00000016504	-	64	59.974	Amphiprion_ocellaris
ENSGAFG00000015171	-	93	81.643	ENSAPEG00000020100	-	87	62.170	Amphiprion_percula
ENSGAFG00000015171	-	93	81.643	ENSATEG00000007348	-	87	60.342	Anabas_testudineus
ENSGAFG00000015171	-	92	83.619	ENSACLG00000019938	-	56	60.623	Astatotilapia_calliptera
ENSGAFG00000015171	-	54	81.905	ENSACLG00000011103	acin1b	50	73.387	Astatotilapia_calliptera
ENSGAFG00000015171	-	72	65.094	ENSCSEG00000021145	acin1a	99	66.162	Cynoglossus_semilaevis
ENSGAFG00000015171	-	74	80.000	ENSCVAG00000009841	acin1b	73	61.088	Cyprinodon_variegatus
ENSGAFG00000015171	-	72	92.453	ENSDARG00000054290	acin1a	66	92.453	Danio_rerio
ENSGAFG00000015171	-	70	94.681	ENSELUG00000004511	acin1a	85	94.175	Esox_lucius
ENSGAFG00000015171	-	71	86.957	ENSELUG00000003511	acin1b	53	86.957	Esox_lucius
ENSGAFG00000015171	-	70	95.050	ENSGMOG00000014877	acin1a	64	95.050	Gadus_morhua
ENSGAFG00000015171	-	86	77.698	ENSGACG00000014063	acin1a	59	72.912	Gasterosteus_aculeatus
ENSGAFG00000015171	-	54	81.905	ENSHBUG00000020274	acin1b	50	73.387	Haplochromis_burtoni
ENSGAFG00000015171	-	92	83.863	ENSHBUG00000002970	-	62	60.380	Haplochromis_burtoni
ENSGAFG00000015171	-	94	70.353	ENSHCOG00000016677	-	62	55.556	Hippocampus_comes
ENSGAFG00000015171	-	68	85.859	ENSHCOG00000000814	acin1b	82	57.377	Hippocampus_comes
ENSGAFG00000015171	-	80	89.362	ENSIPUG00000006269	acin1b	64	84.071	Ictalurus_punctatus
ENSGAFG00000015171	-	94	79.302	ENSKMAG00000020228	-	88	63.150	Kryptolebias_marmoratus
ENSGAFG00000015171	-	92	83.619	ENSMZEG00005012139	-	56	60.623	Maylandia_zebra
ENSGAFG00000015171	-	94	73.167	ENSMMOG00000013326	acin1a	75	75.708	Mola_mola
ENSGAFG00000015171	-	94	77.935	ENSNBRG00000017740	acin1a	88	78.060	Neolamprologus_brichardi
ENSGAFG00000015171	-	73	91.818	ENSONIG00000015556	acin1a	91	88.312	Oreochromis_niloticus
ENSGAFG00000015171	-	72	80.952	ENSORLG00000007365	acin1b	51	72.222	Oryzias_latipes
ENSGAFG00000015171	-	94	77.962	ENSORLG00000012188	-	63	55.738	Oryzias_latipes
ENSGAFG00000015171	-	72	80.952	ENSORLG00020007510	acin1b	51	72.222	Oryzias_latipes_hni
ENSGAFG00000015171	-	94	77.962	ENSORLG00020007737	-	60	56.203	Oryzias_latipes_hni
ENSGAFG00000015171	-	94	78.365	ENSORLG00015002304	-	63	56.337	Oryzias_latipes_hsok
ENSGAFG00000015171	-	94	77.725	ENSOMEG00000013014	-	62	57.156	Oryzias_melastigma
ENSGAFG00000015171	-	74	79.048	ENSOMEG00000015053	acin1b	51	69.841	Oryzias_melastigma
ENSGAFG00000015171	-	93	50.359	ENSPMGG00000019929	-	96	58.161	Periophthalmus_magnuspinnatus
ENSGAFG00000015171	-	79	53.281	ENSPMGG00000018777	acin1b	54	82.828	Periophthalmus_magnuspinnatus
ENSGAFG00000015171	-	53	84.375	ENSPFOG00000009202	acin1b	50	72.358	Poecilia_formosa
ENSGAFG00000015171	-	94	94.286	ENSPFOG00000016546	-	80	79.825	Poecilia_formosa
ENSGAFG00000015171	-	53	84.375	ENSPLAG00000021380	acin1b	50	72.358	Poecilia_latipinna
ENSGAFG00000015171	-	99	97.706	ENSPLAG00000018260	-	92	97.696	Poecilia_latipinna
ENSGAFG00000015171	-	94	95.465	ENSPMEG00000011353	ACIN1	62	81.076	Poecilia_mexicana
ENSGAFG00000015171	-	53	84.375	ENSPMEG00000000313	acin1b	50	72.358	Poecilia_mexicana
ENSGAFG00000015171	-	90	68.939	ENSPNAG00000021539	acin1a	90	57.474	Pygocentrus_nattereri
ENSGAFG00000015171	-	94	80.751	ENSSMAG00000014213	-	83	69.063	Scophthalmus_maximus
ENSGAFG00000015171	-	70	87.234	ENSSDUG00000006437	acin1b	55	56.907	Seriola_dumerili
ENSGAFG00000015171	-	92	55.454	ENSSDUG00000012164	-	99	66.225	Seriola_dumerili
ENSGAFG00000015171	-	94	79.551	ENSSLDG00000001566	-	85	72.331	Seriola_lalandi_dorsalis
ENSGAFG00000015171	-	93	81.643	ENSSPAG00000023019	-	85	72.767	Stegastes_partitus
ENSGAFG00000015171	-	78	56.225	ENSTRUG00000023910	-	83	46.687	Takifugu_rubripes
ENSGAFG00000015171	-	71	91.743	ENSTNIG00000007936	acin1a	95	72.483	Tetraodon_nigroviridis
ENSGAFG00000015171	-	52	84.375	ENSXCOG00000000454	acin1b	50	80.000	Xiphophorus_couchianus