EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000015206 (Gene tree)
Gene ID: -
Gene Symbol: sf3b3
Alias: ik:tdsubc_2b2|wu:fb81f05|xx:tdsubc_2b2|zgc:55440
Full Name: splicing factor 3b%2C subunit 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 23361 bases
Position: chrNHOQ01000086.1:3277404-3300764
Accession: ZDB-GENE-040426-2901
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000022530	CPSF_A	PF03178.15	3.9e-99	1	1
ENSGAFP00000022540	CPSF_A	PF03178.15	1.8e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022762	-	3006	-	ENSGAFP00000022540	1001 (aa)	-	-
ENSGAFT00000022752	-	3916	-	ENSGAFP00000022530	1217 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015206's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015206's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015206	sf3b3	100	92.605	ENSG00000189091	SF3B3	100	96.774	Homo_sapiens
ENSGAFG00000015206	sf3b3	98	97.663	ENSAPOG00000006172	sf3b3	98	97.694	Acanthochromis_polyacanthus
ENSGAFG00000015206	sf3b3	100	92.459	ENSAMEG00000002187	SF3B3	100	92.459	Ailuropoda_melanoleuca
ENSGAFG00000015206	sf3b3	89	98.533	ENSACIG00000016487	sf3b3	99	95.442	Amphilophus_citrinellus
ENSGAFG00000015206	sf3b3	100	97.781	ENSAOCG00000007158	sf3b3	100	97.781	Amphiprion_ocellaris
ENSGAFG00000015206	sf3b3	100	97.781	ENSAPEG00000022786	sf3b3	100	97.781	Amphiprion_percula
ENSGAFG00000015206	sf3b3	100	97.864	ENSATEG00000013708	sf3b3	100	97.864	Anabas_testudineus
ENSGAFG00000015206	sf3b3	98	92.792	ENSAPLG00000004996	SF3B3	99	92.792	Anas_platyrhynchos
ENSGAFG00000015206	sf3b3	100	93.016	ENSACAG00000001817	SF3B3	100	93.016	Anolis_carolinensis
ENSGAFG00000015206	sf3b3	100	92.605	ENSANAG00000028001	SF3B3	100	92.605	Aotus_nancymaae
ENSGAFG00000015206	sf3b3	98	98.171	ENSACLG00000022555	sf3b3	98	97.865	Astatotilapia_calliptera
ENSGAFG00000015206	sf3b3	100	97.288	ENSAMXG00000003410	sf3b3	100	97.288	Astyanax_mexicanus
ENSGAFG00000015206	sf3b3	100	92.605	ENSBTAG00000010627	SF3B3	100	92.605	Bos_taurus
ENSGAFG00000015206	sf3b3	100	60.308	WBGene00019323	teg-4	100	60.308	Caenorhabditis_elegans
ENSGAFG00000015206	sf3b3	100	92.605	ENSCJAG00000014773	SF3B3	99	92.605	Callithrix_jacchus
ENSGAFG00000015206	sf3b3	100	92.687	ENSCAFG00000020151	SF3B3	100	92.687	Canis_familiaris
ENSGAFG00000015206	sf3b3	100	92.687	ENSCAFG00020020912	SF3B3	100	92.687	Canis_lupus_dingo
ENSGAFG00000015206	sf3b3	100	92.687	ENSCHIG00000019822	SF3B3	100	92.687	Capra_hircus
ENSGAFG00000015206	sf3b3	100	92.605	ENSTSYG00000007910	SF3B3	100	92.605	Carlito_syrichta
ENSGAFG00000015206	sf3b3	84	78.261	ENSCAPG00000001484	SF3B3	92	78.261	Cavia_aperea
ENSGAFG00000015206	sf3b3	100	91.290	ENSCPOG00000000586	SF3B3	100	91.290	Cavia_porcellus
ENSGAFG00000015206	sf3b3	100	92.605	ENSCCAG00000017736	SF3B3	100	92.605	Cebus_capucinus
ENSGAFG00000015206	sf3b3	100	92.605	ENSCATG00000036562	SF3B3	100	92.605	Cercocebus_atys
ENSGAFG00000015206	sf3b3	100	92.605	ENSCLAG00000003921	SF3B3	100	92.605	Chinchilla_lanigera
ENSGAFG00000015206	sf3b3	100	92.605	ENSCSAG00000004371	SF3B3	100	92.605	Chlorocebus_sabaeus
ENSGAFG00000015206	sf3b3	90	89.097	ENSCHOG00000001878	SF3B3	90	89.097	Choloepus_hoffmanni
ENSGAFG00000015206	sf3b3	100	92.440	ENSCPBG00000015853	SF3B3	100	92.440	Chrysemys_picta_bellii
ENSGAFG00000015206	sf3b3	100	79.803	ENSCING00000001342	-	100	79.803	Ciona_intestinalis
ENSGAFG00000015206	sf3b3	98	79.412	ENSCSAVG00000011454	-	100	78.407	Ciona_savignyi
ENSGAFG00000015206	sf3b3	98	93.699	ENSCANG00000042920	SF3B3	100	89.729	Colobus_angolensis_palliatus
ENSGAFG00000015206	sf3b3	100	92.523	ENSCGRG00001015908	Sf3b3	100	92.523	Cricetulus_griseus_chok1gshd
ENSGAFG00000015206	sf3b3	100	92.523	ENSCGRG00000010180	Sf3b3	100	92.523	Cricetulus_griseus_crigri
ENSGAFG00000015206	sf3b3	99	97.160	ENSCSEG00000014192	sf3b3	98	97.160	Cynoglossus_semilaevis
ENSGAFG00000015206	sf3b3	100	98.521	ENSCVAG00000010459	sf3b3	100	98.521	Cyprinodon_variegatus
ENSGAFG00000015206	sf3b3	100	96.549	ENSDARG00000103553	sf3b3	100	96.549	Danio_rerio
ENSGAFG00000015206	sf3b3	85	92.382	ENSDNOG00000043626	SF3B3	100	92.382	Dasypus_novemcinctus
ENSGAFG00000015206	sf3b3	100	92.605	ENSDORG00000014176	Sf3b3	100	92.605	Dipodomys_ordii
ENSGAFG00000015206	sf3b3	100	74.797	FBgn0035162	Sf3b3	100	74.797	Drosophila_melanogaster
ENSGAFG00000015206	sf3b3	84	95.161	ENSETEG00000002729	SF3B3	84	95.161	Echinops_telfairi
ENSGAFG00000015206	sf3b3	100	85.867	ENSEBUG00000006117	sf3b3	100	85.867	Eptatretus_burgeri
ENSGAFG00000015206	sf3b3	100	92.687	ENSEASG00005013376	SF3B3	100	92.687	Equus_asinus_asinus
ENSGAFG00000015206	sf3b3	100	92.687	ENSECAG00000014053	SF3B3	100	92.687	Equus_caballus
ENSGAFG00000015206	sf3b3	93	92.632	ENSEEUG00000015611	SF3B3	93	92.632	Erinaceus_europaeus
ENSGAFG00000015206	sf3b3	100	95.410	ENSELUG00000015417	sf3b3	100	95.410	Esox_lucius
ENSGAFG00000015206	sf3b3	100	92.687	ENSFCAG00000009487	SF3B3	100	92.687	Felis_catus
ENSGAFG00000015206	sf3b3	100	92.440	ENSFALG00000007372	SF3B3	100	92.440	Ficedula_albicollis
ENSGAFG00000015206	sf3b3	100	92.605	ENSFDAG00000002608	SF3B3	100	92.605	Fukomys_damarensis
ENSGAFG00000015206	sf3b3	100	99.096	ENSFHEG00000017824	sf3b3	100	99.096	Fundulus_heteroclitus
ENSGAFG00000015206	sf3b3	100	93.268	ENSGMOG00000008139	sf3b3	100	93.268	Gadus_morhua
ENSGAFG00000015206	sf3b3	100	92.687	ENSGALG00000002531	SF3B3	100	92.687	Gallus_gallus
ENSGAFG00000015206	sf3b3	100	97.455	ENSGACG00000002646	sf3b3	100	97.455	Gasterosteus_aculeatus
ENSGAFG00000015206	sf3b3	98	93.598	ENSGAGG00000006746	SF3B3	97	92.570	Gopherus_agassizii
ENSGAFG00000015206	sf3b3	100	92.605	ENSGGOG00000003246	SF3B3	100	92.605	Gorilla_gorilla
ENSGAFG00000015206	sf3b3	92	90.885	ENSHBUG00000005960	sf3b3	99	90.885	Haplochromis_burtoni
ENSGAFG00000015206	sf3b3	100	92.605	ENSHGLG00000010135	SF3B3	100	92.605	Heterocephalus_glaber_female
ENSGAFG00000015206	sf3b3	100	90.511	ENSHGLG00100011148	SF3B3	100	90.511	Heterocephalus_glaber_male
ENSGAFG00000015206	sf3b3	100	97.371	ENSHCOG00000011981	sf3b3	100	97.371	Hippocampus_comes
ENSGAFG00000015206	sf3b3	100	97.042	ENSIPUG00000020435	sf3b3	100	97.042	Ictalurus_punctatus
ENSGAFG00000015206	sf3b3	100	92.605	ENSSTOG00000007065	SF3B3	100	92.605	Ictidomys_tridecemlineatus
ENSGAFG00000015206	sf3b3	100	92.605	ENSJJAG00000003948	Sf3b3	100	92.605	Jaculus_jaculus
ENSGAFG00000015206	sf3b3	98	97.866	ENSKMAG00000004066	sf3b3	99	97.865	Kryptolebias_marmoratus
ENSGAFG00000015206	sf3b3	100	98.028	ENSLBEG00000018302	sf3b3	100	98.028	Labrus_bergylta
ENSGAFG00000015206	sf3b3	98	89.701	ENSLACG00000012501	SF3B3	99	89.701	Latimeria_chalumnae
ENSGAFG00000015206	sf3b3	100	96.388	ENSLOCG00000007566	sf3b3	100	96.388	Lepisosteus_oculatus
ENSGAFG00000015206	sf3b3	100	92.687	ENSLAFG00000012219	SF3B3	100	92.687	Loxodonta_africana
ENSGAFG00000015206	sf3b3	100	92.605	ENSMFAG00000045487	SF3B3	100	92.605	Macaca_fascicularis
ENSGAFG00000015206	sf3b3	100	92.605	ENSMMUG00000017812	SF3B3	100	92.605	Macaca_mulatta
ENSGAFG00000015206	sf3b3	100	92.605	ENSMNEG00000033385	SF3B3	100	92.605	Macaca_nemestrina
ENSGAFG00000015206	sf3b3	100	89.071	ENSMLEG00000043891	SF3B3	100	89.071	Mandrillus_leucophaeus
ENSGAFG00000015206	sf3b3	100	97.946	ENSMAMG00000016837	sf3b3	100	97.946	Mastacembelus_armatus
ENSGAFG00000015206	sf3b3	100	97.946	ENSMZEG00005010836	sf3b3	100	97.946	Maylandia_zebra
ENSGAFG00000015206	sf3b3	89	94.912	ENSMZEG00005026015	sf3b3	99	94.912	Maylandia_zebra
ENSGAFG00000015206	sf3b3	100	92.687	ENSMGAG00000001597	SF3B3	100	92.687	Meleagris_gallopavo
ENSGAFG00000015206	sf3b3	81	76.155	ENSMAUG00000013618	Sf3b3	95	76.529	Mesocricetus_auratus
ENSGAFG00000015206	sf3b3	100	91.550	ENSMICG00000001363	SF3B3	100	91.550	Microcebus_murinus
ENSGAFG00000015206	sf3b3	100	92.523	ENSMOCG00000006108	Sf3b3	100	92.523	Microtus_ochrogaster
ENSGAFG00000015206	sf3b3	89	95.375	ENSMMOG00000002598	sf3b3	97	95.375	Mola_mola
ENSGAFG00000015206	sf3b3	100	88.588	ENSMODG00000014363	SF3B3	100	88.588	Monodelphis_domestica
ENSGAFG00000015206	sf3b3	100	97.371	ENSMALG00000008014	sf3b3	100	97.371	Monopterus_albus
ENSGAFG00000015206	sf3b3	100	92.523	MGP_CAROLIEiJ_G0031563	Sf3b3	100	92.523	Mus_caroli
ENSGAFG00000015206	sf3b3	100	92.523	ENSMUSG00000033732	Sf3b3	100	92.523	Mus_musculus
ENSGAFG00000015206	sf3b3	100	92.523	MGP_SPRETEiJ_G0032681	Sf3b3	100	92.523	Mus_spretus
ENSGAFG00000015206	sf3b3	100	92.687	ENSMPUG00000010277	SF3B3	100	92.687	Mustela_putorius_furo
ENSGAFG00000015206	sf3b3	100	92.523	ENSMLUG00000014607	SF3B3	100	92.523	Myotis_lucifugus
ENSGAFG00000015206	sf3b3	100	92.605	ENSNGAG00000021903	Sf3b3	100	92.605	Nannospalax_galili
ENSGAFG00000015206	sf3b3	83	94.286	ENSNBRG00000007197	sf3b3	99	94.286	Neolamprologus_brichardi
ENSGAFG00000015206	sf3b3	100	91.133	ENSNLEG00000016127	SF3B3	100	91.133	Nomascus_leucogenys
ENSGAFG00000015206	sf3b3	92	88.740	ENSMEUG00000004479	SF3B3	94	88.740	Notamacropus_eugenii
ENSGAFG00000015206	sf3b3	98	89.522	ENSOPRG00000009847	SF3B3	100	89.522	Ochotona_princeps
ENSGAFG00000015206	sf3b3	100	92.605	ENSODEG00000014154	SF3B3	100	92.605	Octodon_degus
ENSGAFG00000015206	sf3b3	100	97.864	ENSONIG00000011198	sf3b3	100	97.864	Oreochromis_niloticus
ENSGAFG00000015206	sf3b3	100	92.769	ENSOANG00000001161	-	100	92.769	Ornithorhynchus_anatinus
ENSGAFG00000015206	sf3b3	100	90.633	ENSOCUG00000004139	SF3B3	100	90.633	Oryctolagus_cuniculus
ENSGAFG00000015206	sf3b3	100	97.453	ENSORLG00000013472	sf3b3	100	97.453	Oryzias_latipes
ENSGAFG00000015206	sf3b3	100	97.453	ENSORLG00020017473	sf3b3	100	97.453	Oryzias_latipes_hni
ENSGAFG00000015206	sf3b3	100	97.617	ENSORLG00015007710	sf3b3	100	97.617	Oryzias_latipes_hsok
ENSGAFG00000015206	sf3b3	100	97.453	ENSOMEG00000014483	sf3b3	100	97.453	Oryzias_melastigma
ENSGAFG00000015206	sf3b3	100	92.295	ENSOGAG00000016051	SF3B3	100	92.295	Otolemur_garnettii
ENSGAFG00000015206	sf3b3	100	92.459	ENSOARG00000004816	SF3B3	100	92.459	Ovis_aries
ENSGAFG00000015206	sf3b3	100	92.605	ENSPPAG00000026807	SF3B3	100	92.605	Pan_paniscus
ENSGAFG00000015206	sf3b3	100	92.687	ENSPPRG00000001686	SF3B3	100	92.687	Panthera_pardus
ENSGAFG00000015206	sf3b3	85	94.028	ENSPTIG00000020382	SF3B3	100	89.880	Panthera_tigris_altaica
ENSGAFG00000015206	sf3b3	100	92.605	ENSPTRG00000008308	SF3B3	100	92.605	Pan_troglodytes
ENSGAFG00000015206	sf3b3	100	92.605	ENSPANG00000024075	SF3B3	100	92.605	Papio_anubis
ENSGAFG00000015206	sf3b3	100	96.467	ENSPKIG00000002712	sf3b3	100	96.467	Paramormyrops_kingsleyae
ENSGAFG00000015206	sf3b3	89	92.640	ENSPSIG00000002232	SF3B3	100	92.640	Pelodiscus_sinensis
ENSGAFG00000015206	sf3b3	100	92.523	ENSPEMG00000008603	Sf3b3	100	92.523	Peromyscus_maniculatus_bairdii
ENSGAFG00000015206	sf3b3	100	90.058	ENSPMAG00000001793	sf3b3	100	90.058	Petromyzon_marinus
ENSGAFG00000015206	sf3b3	100	92.769	ENSPCIG00000014927	SF3B3	100	92.769	Phascolarctos_cinereus
ENSGAFG00000015206	sf3b3	100	99.425	ENSPFOG00000015516	sf3b3	100	99.425	Poecilia_formosa
ENSGAFG00000015206	sf3b3	100	99.425	ENSPLAG00000014330	sf3b3	100	99.425	Poecilia_latipinna
ENSGAFG00000015206	sf3b3	100	99.507	ENSPMEG00000019856	sf3b3	100	99.507	Poecilia_mexicana
ENSGAFG00000015206	sf3b3	99	98.890	ENSPREG00000019669	sf3b3	98	98.890	Poecilia_reticulata
ENSGAFG00000015206	sf3b3	95	92.308	ENSPPYG00000007539	SF3B3	100	92.308	Pongo_abelii
ENSGAFG00000015206	sf3b3	100	71.980	ENSPCAG00000002623	SF3B3	100	71.980	Procavia_capensis
ENSGAFG00000015206	sf3b3	84	96.262	ENSPCOG00000026582	SF3B3	100	96.262	Propithecus_coquereli
ENSGAFG00000015206	sf3b3	100	92.605	ENSPVAG00000000684	SF3B3	100	92.605	Pteropus_vampyrus
ENSGAFG00000015206	sf3b3	100	97.864	ENSPNYG00000003528	sf3b3	100	97.864	Pundamilia_nyererei
ENSGAFG00000015206	sf3b3	100	96.878	ENSPNAG00000015419	sf3b3	100	96.878	Pygocentrus_nattereri
ENSGAFG00000015206	sf3b3	100	92.523	ENSRNOG00000017724	Sf3b3	100	92.523	Rattus_norvegicus
ENSGAFG00000015206	sf3b3	100	92.605	ENSRBIG00000021904	SF3B3	100	92.605	Rhinopithecus_bieti
ENSGAFG00000015206	sf3b3	100	92.605	ENSRROG00000045703	SF3B3	100	92.605	Rhinopithecus_roxellana
ENSGAFG00000015206	sf3b3	100	92.605	ENSSBOG00000029156	SF3B3	100	92.605	Saimiri_boliviensis_boliviensis
ENSGAFG00000015206	sf3b3	100	92.769	ENSSHAG00000000372	SF3B3	100	92.769	Sarcophilus_harrisii
ENSGAFG00000015206	sf3b3	100	96.878	ENSSFOG00015012877	sf3b3	100	96.878	Scleropages_formosus
ENSGAFG00000015206	sf3b3	100	97.453	ENSSMAG00000014386	sf3b3	100	97.453	Scophthalmus_maximus
ENSGAFG00000015206	sf3b3	100	97.864	ENSSDUG00000021201	sf3b3	100	97.864	Seriola_dumerili
ENSGAFG00000015206	sf3b3	100	97.946	ENSSLDG00000017532	sf3b3	100	97.946	Seriola_lalandi_dorsalis
ENSGAFG00000015206	sf3b3	98	93.598	ENSSARG00000006917	SF3B3	93	92.647	Sorex_araneus
ENSGAFG00000015206	sf3b3	100	92.523	ENSSPUG00000006253	SF3B3	100	92.523	Sphenodon_punctatus
ENSGAFG00000015206	sf3b3	100	90.140	ENSSPAG00000003125	sf3b3	100	90.140	Stegastes_partitus
ENSGAFG00000015206	sf3b3	100	92.687	ENSSSCG00000025323	SF3B3	100	92.687	Sus_scrofa
ENSGAFG00000015206	sf3b3	100	92.611	ENSTGUG00000006082	SF3B3	100	92.611	Taeniopygia_guttata
ENSGAFG00000015206	sf3b3	54	85.261	ENSTRUG00000015623	sf3b3	88	87.755	Takifugu_rubripes
ENSGAFG00000015206	sf3b3	98	97.459	ENSTNIG00000004857	sf3b3	100	97.335	Tetraodon_nigroviridis
ENSGAFG00000015206	sf3b3	98	77.236	ENSTBEG00000002946	SF3B3	100	78.433	Tupaia_belangeri
ENSGAFG00000015206	sf3b3	100	91.865	ENSTTRG00000005855	SF3B3	100	91.865	Tursiops_truncatus
ENSGAFG00000015206	sf3b3	100	92.687	ENSUAMG00000006780	SF3B3	100	92.687	Ursus_americanus
ENSGAFG00000015206	sf3b3	100	92.687	ENSUMAG00000017757	SF3B3	100	92.687	Ursus_maritimus
ENSGAFG00000015206	sf3b3	100	77.568	ENSVPAG00000003202	SF3B3	100	77.568	Vicugna_pacos
ENSGAFG00000015206	sf3b3	100	92.687	ENSVVUG00000017922	SF3B3	100	92.687	Vulpes_vulpes
ENSGAFG00000015206	sf3b3	100	92.933	ENSXETG00000032869	SF3B3	100	92.933	Xenopus_tropicalis
ENSGAFG00000015206	sf3b3	94	99.469	ENSXCOG00000013628	sf3b3	97	99.469	Xiphophorus_couchianus
ENSGAFG00000015206	sf3b3	100	99.589	ENSXMAG00000006334	sf3b3	100	99.589	Xiphophorus_maculatus