EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000015210 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8117 bases
Position: chrNHOQ01002364.1:4583246-4591362
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000022526	ResIII	PF04851.15	2.2e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022748	-	1845	-	ENSGAFP00000022526	614 (aa)	-	-
ENSGAFT00000022744	-	1224	-	ENSGAFP00000022522	407 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015210's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015210's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000015210	-	55	49.057	ENSGAFG00000015359	-	84	49.057
ENSGAFG00000015210	-	80	31.399	ENSGAFG00000007901	rad54b	52	31.399
ENSGAFG00000015210	-	88	39.587	ENSGAFG00000014337	-	81	39.225
ENSGAFG00000015210	-	88	38.655	ENSGAFG00000001204	hells	66	38.487

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015210	-	98	70.692	ENSG00000100888	CHD8	86	80.899	Homo_sapiens
ENSGAFG00000015210	-	96	50.722	ENSCSAVG00000005900	-	74	56.465	Ciona_savignyi
ENSGAFG00000015210	-	63	56.391	ENSCVAG00000020866	-	66	56.391	Cyprinodon_variegatus
ENSGAFG00000015210	-	63	58.145	ENSDORG00000026018	-	63	58.145	Dipodomys_ordii
ENSGAFG00000015210	-	63	69.674	ENSFHEG00000017596	-	63	69.674	Fundulus_heteroclitus
ENSGAFG00000015210	-	63	63.409	ENSGALG00000036191	-	65	63.409	Gallus_gallus
ENSGAFG00000015210	-	63	73.894	ENSHCOG00000012108	-	61	74.107	Hippocampus_comes
ENSGAFG00000015210	-	63	57.644	ENSJJAG00000010052	-	63	57.644	Jaculus_jaculus
ENSGAFG00000015210	-	63	57.644	ENSNGAG00000017135	-	63	57.644	Nannospalax_galili
ENSGAFG00000015210	-	63	58.145	ENSODEG00000015358	-	63	58.145	Octodon_degus
ENSGAFG00000015210	-	61	62.468	ENSOANG00000013276	-	100	62.468	Ornithorhynchus_anatinus
ENSGAFG00000015210	-	97	86.818	ENSPMGG00000019850	chd8	82	82.190	Periophthalmus_magnuspinnatus
ENSGAFG00000015210	-	70	58.520	ENSPMEG00000000676	-	64	58.520	Poecilia_mexicana
ENSGAFG00000015210	-	96	55.217	ENSPREG00000014744	chd7	96	66.260	Poecilia_reticulata
ENSGAFG00000015210	-	97	76.090	ENSTRUG00000006682	chd8	62	87.946	Takifugu_rubripes
ENSGAFG00000015210	-	98	70.531	ENSUAMG00000004198	CHD8	56	70.531	Ursus_americanus
ENSGAFG00000015210	-	98	69.021	ENSXETG00000017194	CHD8	60	69.144	Xenopus_tropicalis