EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000015291 (Gene tree)
Gene ID: -
Gene Symbol: ptcd3
Alias: fa08d08|wu:fa08d08|zgc:123014
Full Name: pentatricopeptide repeat domain 3
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8194 bases
Position: chrNHOQ01001578.1:285596-293789
Accession: ZDB-GENE-030131-6849
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000022650	PPR	PF01535.20	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022871	-	1662	-	ENSGAFP00000022645	554 (aa)	-	-
ENSGAFT00000022877	-	1686	-	ENSGAFP00000022650	561 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015291's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015291's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015291	ptcd3	94	68.103	ENSACIG00000022263	ptcd3	94	68.103	Amphilophus_citrinellus
ENSGAFG00000015291	ptcd3	94	68.078	ENSAOCG00000017186	ptcd3	83	68.078	Amphiprion_ocellaris
ENSGAFG00000015291	ptcd3	94	68.430	ENSAPEG00000016069	ptcd3	83	68.430	Amphiprion_percula
ENSGAFG00000015291	ptcd3	93	43.608	ENSAPLG00000005086	PTCD3	94	42.732	Anas_platyrhynchos
ENSGAFG00000015291	ptcd3	94	73.944	ENSACLG00000020653	ptcd3	85	73.768	Astatotilapia_calliptera
ENSGAFG00000015291	ptcd3	93	54.674	ENSAMXG00000011570	ptcd3	85	54.561	Astyanax_mexicanus
ENSGAFG00000015291	ptcd3	94	74.824	ENSCVAG00000020820	ptcd3	92	74.296	Cyprinodon_variegatus
ENSGAFG00000015291	ptcd3	94	74.120	ENSHBUG00000020056	ptcd3	90	73.944	Haplochromis_burtoni
ENSGAFG00000015291	ptcd3	94	67.193	ENSLBEG00000015349	ptcd3	85	67.018	Labrus_bergylta
ENSGAFG00000015291	ptcd3	94	74.120	ENSMZEG00005004980	ptcd3	85	73.944	Maylandia_zebra
ENSGAFG00000015291	ptcd3	93	41.710	ENSMGAG00000013124	PTCD3	91	41.361	Meleagris_gallopavo
ENSGAFG00000015291	ptcd3	93	69.542	ENSMALG00000013282	ptcd3	85	69.542	Monopterus_albus
ENSGAFG00000015291	ptcd3	94	69.892	ENSNBRG00000000447	ptcd3	94	69.892	Neolamprologus_brichardi
ENSGAFG00000015291	ptcd3	94	73.768	ENSONIG00000015886	ptcd3	89	73.286	Oreochromis_niloticus
ENSGAFG00000015291	ptcd3	94	70.899	ENSORLG00000008776	ptcd3	87	71.252	Oryzias_latipes
ENSGAFG00000015291	ptcd3	94	70.547	ENSORLG00020020676	ptcd3	84	70.899	Oryzias_latipes_hni
ENSGAFG00000015291	ptcd3	94	60.171	ENSORLG00015015978	ptcd3	98	61.473	Oryzias_latipes_hsok
ENSGAFG00000015291	ptcd3	94	82.777	ENSPFOG00000004442	ptcd3	89	82.425	Poecilia_formosa
ENSGAFG00000015291	ptcd3	85	77.920	ENSPLAG00000021401	ptcd3	87	78.285	Poecilia_latipinna
ENSGAFG00000015291	ptcd3	94	80.859	ENSPMEG00000007153	ptcd3	97	80.680	Poecilia_mexicana
ENSGAFG00000015291	ptcd3	93	51.813	ENSSFOG00015019643	ptcd3	91	51.813	Scleropages_formosus
ENSGAFG00000015291	ptcd3	82	46.484	ENSTGUG00000010760	PTCD3	94	46.680	Taeniopygia_guttata
ENSGAFG00000015291	ptcd3	94	63.093	ENSTRUG00000003939	ptcd3	87	62.917	Takifugu_rubripes