EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000015349 (Gene tree)
Gene ID: -
Gene Symbol: smfn
Alias: zgc:73191
Full Name: small fragment nuclease
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5888 bases
Position: chrNHOQ01002811.1:937181-943068
Accession: ZDB-GENE-040426-1709
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000022704	RNase_T	PF00929.24	3.6e-34	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000022931	-	2208	-	ENSGAFP00000022704	280 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015349's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015349's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015349	smfn	72	77.114	ENSG00000076043	REXO2	98	78.378	Homo_sapiens
ENSGAFG00000015349	smfn	72	78.109	ENSAMEG00000013263	REXO2	85	78.109	Ailuropoda_melanoleuca
ENSGAFG00000015349	smfn	65	84.153	ENSACIG00000023553	smfn	98	84.153	Amphilophus_citrinellus
ENSGAFG00000015349	smfn	74	85.437	ENSAPEG00000012435	smfn	76	85.437	Amphiprion_percula
ENSGAFG00000015349	smfn	76	82.075	ENSATEG00000015385	smfn	76	82.075	Anabas_testudineus
ENSGAFG00000015349	smfn	67	77.540	ENSAPLG00000005045	REXO2	91	77.540	Anas_platyrhynchos
ENSGAFG00000015349	smfn	65	71.038	ENSACAG00000011631	REXO2	86	71.038	Anolis_carolinensis
ENSGAFG00000015349	smfn	72	77.612	ENSANAG00000020834	REXO2	85	77.612	Aotus_nancymaae
ENSGAFG00000015349	smfn	77	80.465	ENSACLG00000024566	smfn	96	84.783	Astatotilapia_calliptera
ENSGAFG00000015349	smfn	72	78.109	ENSBTAG00000005843	REXO2	85	78.109	Bos_taurus
ENSGAFG00000015349	smfn	63	49.153	WBGene00007429	C08B6.8	88	55.072	Caenorhabditis_elegans
ENSGAFG00000015349	smfn	71	77.000	ENSCJAG00000012434	REXO2	85	76.617	Callithrix_jacchus
ENSGAFG00000015349	smfn	72	77.114	ENSCAFG00000013511	REXO2	85	77.114	Canis_familiaris
ENSGAFG00000015349	smfn	72	78.109	ENSCAFG00020002513	REXO2	85	78.109	Canis_lupus_dingo
ENSGAFG00000015349	smfn	71	78.500	ENSCHIG00000009264	REXO2	85	78.109	Capra_hircus
ENSGAFG00000015349	smfn	69	67.708	ENSTSYG00000027948	-	98	67.708	Carlito_syrichta
ENSGAFG00000015349	smfn	72	77.612	ENSTSYG00000002237	REXO2	85	77.612	Carlito_syrichta
ENSGAFG00000015349	smfn	66	78.919	ENSCAPG00000006093	REXO2	98	78.919	Cavia_aperea
ENSGAFG00000015349	smfn	73	76.847	ENSCPOG00000010548	REXO2	86	76.471	Cavia_porcellus
ENSGAFG00000015349	smfn	72	77.612	ENSCCAG00000034979	REXO2	85	77.612	Cebus_capucinus
ENSGAFG00000015349	smfn	72	77.114	ENSCATG00000015278	REXO2	85	77.114	Cercocebus_atys
ENSGAFG00000015349	smfn	73	76.847	ENSCLAG00000011195	REXO2	86	76.471	Chinchilla_lanigera
ENSGAFG00000015349	smfn	72	77.114	ENSCSAG00000002754	REXO2	85	77.114	Chlorocebus_sabaeus
ENSGAFG00000015349	smfn	70	77.157	ENSCHOG00000000642	-	84	76.000	Choloepus_hoffmanni
ENSGAFG00000015349	smfn	70	54.315	ENSCING00000009858	-	95	54.315	Ciona_intestinalis
ENSGAFG00000015349	smfn	72	77.114	ENSCANG00000034756	REXO2	85	77.114	Colobus_angolensis_palliatus
ENSGAFG00000015349	smfn	71	77.000	ENSCGRG00001013673	-	98	77.000	Cricetulus_griseus_chok1gshd
ENSGAFG00000015349	smfn	71	77.500	ENSCGRG00001019814	-	85	77.114	Cricetulus_griseus_chok1gshd
ENSGAFG00000015349	smfn	71	75.500	ENSCGRG00001010922	-	98	75.500	Cricetulus_griseus_chok1gshd
ENSGAFG00000015349	smfn	71	77.500	ENSCGRG00000006235	Rexo2	85	77.114	Cricetulus_griseus_crigri
ENSGAFG00000015349	smfn	69	83.420	ENSCSEG00000007214	smfn	85	72.653	Cynoglossus_semilaevis
ENSGAFG00000015349	smfn	65	89.071	ENSCVAG00000012008	smfn	99	89.071	Cyprinodon_variegatus
ENSGAFG00000015349	smfn	81	72.609	ENSDARG00000009806	smfn	87	72.609	Danio_rerio
ENSGAFG00000015349	smfn	63	81.714	ENSDNOG00000046533	REXO2	84	81.714	Dasypus_novemcinctus
ENSGAFG00000015349	smfn	69	62.500	ENSDORG00000025142	-	87	60.804	Dipodomys_ordii
ENSGAFG00000015349	smfn	72	77.612	ENSDORG00000011255	Rexo2	85	77.612	Dipodomys_ordii
ENSGAFG00000015349	smfn	67	53.191	FBgn0039115	CG10214	88	53.191	Drosophila_melanogaster
ENSGAFG00000015349	smfn	64	77.095	ENSEBUG00000013964	REXO2	61	77.095	Eptatretus_burgeri
ENSGAFG00000015349	smfn	71	78.500	ENSEASG00005006674	REXO2	84	78.500	Equus_asinus_asinus
ENSGAFG00000015349	smfn	71	78.500	ENSECAG00000005988	REXO2	84	78.500	Equus_caballus
ENSGAFG00000015349	smfn	93	65.267	ENSELUG00000020072	smfn	86	65.267	Esox_lucius
ENSGAFG00000015349	smfn	71	78.500	ENSFCAG00000018632	REXO2	85	78.109	Felis_catus
ENSGAFG00000015349	smfn	67	75.401	ENSFALG00000010044	REXO2	93	75.401	Ficedula_albicollis
ENSGAFG00000015349	smfn	73	76.847	ENSFDAG00000011764	REXO2	86	76.471	Fukomys_damarensis
ENSGAFG00000015349	smfn	68	80.000	ENSGMOG00000006370	smfn	98	80.000	Gadus_morhua
ENSGAFG00000015349	smfn	68	79.365	ENSGALG00000035980	REXO2	84	77.436	Gallus_gallus
ENSGAFG00000015349	smfn	70	84.615	ENSGACG00000020096	smfn	96	84.615	Gasterosteus_aculeatus
ENSGAFG00000015349	smfn	71	76.768	ENSGAGG00000021126	REXO2	86	76.768	Gopherus_agassizii
ENSGAFG00000015349	smfn	72	77.114	ENSGGOG00000023267	REXO2	85	77.114	Gorilla_gorilla
ENSGAFG00000015349	smfn	77	59.070	ENSHBUG00000020097	REXO2	82	59.070	Haplochromis_burtoni
ENSGAFG00000015349	smfn	73	76.355	ENSHGLG00000013556	REXO2	86	76.355	Heterocephalus_glaber_female
ENSGAFG00000015349	smfn	73	76.847	ENSHGLG00100005257	REXO2	86	76.847	Heterocephalus_glaber_male
ENSGAFG00000015349	smfn	64	77.778	ENSHCOG00000007122	smfn	98	77.778	Hippocampus_comes
ENSGAFG00000015349	smfn	71	81.313	ENSIPUG00000020440	rexo2	74	80.597	Ictalurus_punctatus
ENSGAFG00000015349	smfn	72	77.612	ENSSTOG00000012465	REXO2	85	77.612	Ictidomys_tridecemlineatus
ENSGAFG00000015349	smfn	72	54.950	ENSJJAG00000022605	-	81	54.950	Jaculus_jaculus
ENSGAFG00000015349	smfn	71	78.000	ENSJJAG00000013710	-	85	77.612	Jaculus_jaculus
ENSGAFG00000015349	smfn	99	69.286	ENSKMAG00000016795	smfn	99	70.000	Kryptolebias_marmoratus
ENSGAFG00000015349	smfn	65	82.418	ENSLBEG00000006021	smfn	96	82.418	Labrus_bergylta
ENSGAFG00000015349	smfn	71	68.317	ENSLACG00000018623	REXO2	82	68.317	Latimeria_chalumnae
ENSGAFG00000015349	smfn	72	79.104	ENSLOCG00000002389	smfn	96	79.104	Lepisosteus_oculatus
ENSGAFG00000015349	smfn	70	78.680	ENSLAFG00000012451	REXO2	91	71.946	Loxodonta_africana
ENSGAFG00000015349	smfn	72	77.114	ENSMFAG00000041155	REXO2	85	77.114	Macaca_fascicularis
ENSGAFG00000015349	smfn	72	77.114	ENSMMUG00000012269	REXO2	85	77.114	Macaca_mulatta
ENSGAFG00000015349	smfn	72	77.114	ENSMNEG00000033379	REXO2	85	77.114	Macaca_nemestrina
ENSGAFG00000015349	smfn	72	77.114	ENSMLEG00000036571	REXO2	85	77.114	Mandrillus_leucophaeus
ENSGAFG00000015349	smfn	99	67.616	ENSMAMG00000021209	smfn	99	67.616	Mastacembelus_armatus
ENSGAFG00000015349	smfn	77	80.465	ENSMZEG00005020730	REXO2	82	80.465	Maylandia_zebra
ENSGAFG00000015349	smfn	77	80.465	ENSMZEG00005023224	-	82	80.465	Maylandia_zebra
ENSGAFG00000015349	smfn	55	76.774	ENSMGAG00000003026	REXO2	95	76.774	Meleagris_gallopavo
ENSGAFG00000015349	smfn	71	77.500	ENSMAUG00000014576	Rexo2	85	77.114	Mesocricetus_auratus
ENSGAFG00000015349	smfn	72	77.612	ENSMICG00000010094	REXO2	85	77.612	Microcebus_murinus
ENSGAFG00000015349	smfn	72	77.114	ENSMOCG00000009016	Rexo2	85	77.114	Microtus_ochrogaster
ENSGAFG00000015349	smfn	73	81.463	ENSMMOG00000006430	smfn	76	81.463	Mola_mola
ENSGAFG00000015349	smfn	82	70.130	ENSMODG00000013913	REXO2	98	70.130	Monodelphis_domestica
ENSGAFG00000015349	smfn	83	77.155	ENSMALG00000018130	smfn	66	77.155	Monopterus_albus
ENSGAFG00000015349	smfn	71	76.500	MGP_CAROLIEiJ_G0032166	Rexo2	84	76.500	Mus_caroli
ENSGAFG00000015349	smfn	71	76.500	ENSMUSG00000032026	Rexo2	84	76.500	Mus_musculus
ENSGAFG00000015349	smfn	71	76.500	MGP_PahariEiJ_G0015034	Rexo2	84	76.500	Mus_pahari
ENSGAFG00000015349	smfn	71	76.500	MGP_SPRETEiJ_G0033305	Rexo2	84	76.500	Mus_spretus
ENSGAFG00000015349	smfn	72	78.109	ENSMPUG00000003947	REXO2	85	78.109	Mustela_putorius_furo
ENSGAFG00000015349	smfn	71	77.500	ENSMLUG00000009030	REXO2	85	77.114	Myotis_lucifugus
ENSGAFG00000015349	smfn	71	77.500	ENSNGAG00000008819	Rexo2	98	77.500	Nannospalax_galili
ENSGAFG00000015349	smfn	64	84.444	ENSNBRG00000006529	smfn	95	84.444	Neolamprologus_brichardi
ENSGAFG00000015349	smfn	53	51.351	ENSNBRG00000015319	-	92	51.351	Neolamprologus_brichardi
ENSGAFG00000015349	smfn	72	77.114	ENSNLEG00000029745	REXO2	85	77.114	Nomascus_leucogenys
ENSGAFG00000015349	smfn	72	76.617	ENSMEUG00000011558	REXO2	92	76.617	Notamacropus_eugenii
ENSGAFG00000015349	smfn	71	54.000	ENSOPRG00000011076	REXO2	85	53.731	Ochotona_princeps
ENSGAFG00000015349	smfn	64	64.246	ENSODEG00000016046	-	89	64.246	Octodon_degus
ENSGAFG00000015349	smfn	66	78.919	ENSODEG00000009750	-	98	78.919	Octodon_degus
ENSGAFG00000015349	smfn	77	80.930	ENSONIG00000001954	smfn	92	80.930	Oreochromis_niloticus
ENSGAFG00000015349	smfn	70	77.665	ENSOANG00000001754	REXO2	84	76.119	Ornithorhynchus_anatinus
ENSGAFG00000015349	smfn	71	78.000	ENSOCUG00000004274	REXO2	80	78.000	Oryctolagus_cuniculus
ENSGAFG00000015349	smfn	94	68.441	ENSORLG00000005119	smfn	83	68.441	Oryzias_latipes
ENSGAFG00000015349	smfn	94	68.821	ENSORLG00020010121	smfn	83	68.821	Oryzias_latipes_hni
ENSGAFG00000015349	smfn	94	69.202	ENSORLG00015015699	smfn	83	69.202	Oryzias_latipes_hsok
ENSGAFG00000015349	smfn	91	65.637	ENSOMEG00000016878	REXO2	93	65.637	Oryzias_melastigma
ENSGAFG00000015349	smfn	51	74.648	ENSOMEG00000008940	-	99	74.648	Oryzias_melastigma
ENSGAFG00000015349	smfn	71	78.000	ENSOGAG00000016860	REXO2	85	77.612	Otolemur_garnettii
ENSGAFG00000015349	smfn	70	79.695	ENSOARG00000001040	REXO2	94	78.109	Ovis_aries
ENSGAFG00000015349	smfn	72	77.114	ENSPPAG00000039849	REXO2	85	77.114	Pan_paniscus
ENSGAFG00000015349	smfn	71	78.500	ENSPPRG00000007255	REXO2	85	78.109	Panthera_pardus
ENSGAFG00000015349	smfn	66	79.459	ENSPTIG00000015578	REXO2	98	79.459	Panthera_tigris_altaica
ENSGAFG00000015349	smfn	72	77.114	ENSPTRG00000004306	REXO2	85	77.114	Pan_troglodytes
ENSGAFG00000015349	smfn	72	77.114	ENSPANG00000010675	REXO2	85	77.114	Papio_anubis
ENSGAFG00000015349	smfn	96	65.568	ENSPKIG00000000911	smfn	96	65.568	Paramormyrops_kingsleyae
ENSGAFG00000015349	smfn	69	79.793	ENSPSIG00000005151	REXO2	93	63.320	Pelodiscus_sinensis
ENSGAFG00000015349	smfn	65	82.514	ENSPMGG00000007442	smfn	97	82.514	Periophthalmus_magnuspinnatus
ENSGAFG00000015349	smfn	71	62.500	ENSPEMG00000001421	Rexo2	83	62.500	Peromyscus_maniculatus_bairdii
ENSGAFG00000015349	smfn	70	78.680	ENSPCIG00000011227	REXO2	53	78.680	Phascolarctos_cinereus
ENSGAFG00000015349	smfn	99	95.341	ENSPFOG00000017861	smfn	99	97.015	Poecilia_formosa
ENSGAFG00000015349	smfn	92	91.829	ENSPLAG00000007327	REXO2	98	91.829	Poecilia_latipinna
ENSGAFG00000015349	smfn	99	95.341	ENSPMEG00000017343	smfn	99	95.341	Poecilia_mexicana
ENSGAFG00000015349	smfn	99	95.699	ENSPREG00000016438	smfn	99	95.699	Poecilia_reticulata
ENSGAFG00000015349	smfn	72	77.114	ENSPPYG00000003895	REXO2	85	77.114	Pongo_abelii
ENSGAFG00000015349	smfn	76	73.585	ENSPCAG00000005237	REXO2	90	73.239	Procavia_capensis
ENSGAFG00000015349	smfn	58	81.366	ENSPCOG00000027639	REXO2	83	81.366	Propithecus_coquereli
ENSGAFG00000015349	smfn	72	66.502	ENSPVAG00000005295	REXO2	85	66.502	Pteropus_vampyrus
ENSGAFG00000015349	smfn	77	80.000	ENSPNYG00000018401	smfn	82	80.000	Pundamilia_nyererei
ENSGAFG00000015349	smfn	70	80.000	ENSPNAG00000005290	smfn	81	74.886	Pygocentrus_nattereri
ENSGAFG00000015349	smfn	71	77.000	ENSRNOG00000018939	Rexo2	84	77.000	Rattus_norvegicus
ENSGAFG00000015349	smfn	72	77.114	ENSRBIG00000037809	REXO2	85	77.114	Rhinopithecus_bieti
ENSGAFG00000015349	smfn	72	77.114	ENSRROG00000038928	REXO2	85	77.114	Rhinopithecus_roxellana
ENSGAFG00000015349	smfn	64	44.624	YLR059C	REX2	73	43.000	Saccharomyces_cerevisiae
ENSGAFG00000015349	smfn	72	77.612	ENSSBOG00000028651	REXO2	85	77.612	Saimiri_boliviensis_boliviensis
ENSGAFG00000015349	smfn	78	73.059	ENSSHAG00000008008	REXO2	94	73.059	Sarcophilus_harrisii
ENSGAFG00000015349	smfn	66	79.570	ENSSFOG00015022414	smfn	99	79.570	Scleropages_formosus
ENSGAFG00000015349	smfn	98	65.827	ENSSMAG00000003168	smfn	98	65.827	Scophthalmus_maximus
ENSGAFG00000015349	smfn	99	66.078	ENSSDUG00000015624	smfn	99	66.078	Seriola_dumerili
ENSGAFG00000015349	smfn	99	66.431	ENSSLDG00000014005	smfn	99	66.431	Seriola_lalandi_dorsalis
ENSGAFG00000015349	smfn	56	72.611	ENSSPUG00000006005	REXO2	84	72.611	Sphenodon_punctatus
ENSGAFG00000015349	smfn	66	85.484	ENSSPAG00000001530	smfn	100	85.484	Stegastes_partitus
ENSGAFG00000015349	smfn	71	78.500	ENSSSCG00000015056	REXO2	84	78.500	Sus_scrofa
ENSGAFG00000015349	smfn	70	75.127	ENSTGUG00000000121	REXO2	86	74.627	Taeniopygia_guttata
ENSGAFG00000015349	smfn	78	79.358	ENSTRUG00000021529	smfn	80	79.358	Takifugu_rubripes
ENSGAFG00000015349	smfn	68	84.656	ENSTNIG00000008588	smfn	87	84.264	Tetraodon_nigroviridis
ENSGAFG00000015349	smfn	71	78.000	ENSTBEG00000017040	REXO2	85	77.612	Tupaia_belangeri
ENSGAFG00000015349	smfn	71	78.000	ENSTTRG00000014928	REXO2	85	77.612	Tursiops_truncatus
ENSGAFG00000015349	smfn	71	72.277	ENSUAMG00000019096	REXO2	83	81.988	Ursus_americanus
ENSGAFG00000015349	smfn	72	78.109	ENSUMAG00000003770	REXO2	85	78.109	Ursus_maritimus
ENSGAFG00000015349	smfn	66	60.870	ENSVPAG00000006301	REXO2	98	60.870	Vicugna_pacos
ENSGAFG00000015349	smfn	71	78.500	ENSVVUG00000025223	REXO2	85	78.500	Vulpes_vulpes
ENSGAFG00000015349	smfn	76	72.430	ENSXETG00000012648	rexo2	95	69.099	Xenopus_tropicalis
ENSGAFG00000015349	smfn	66	96.757	ENSXCOG00000018838	smfn	94	96.757	Xiphophorus_couchianus
ENSGAFG00000015349	smfn	99	93.907	ENSXMAG00000021125	smfn	88	93.907	Xiphophorus_maculatus