EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000015514 (Gene tree)
Gene ID: -
Gene Symbol: ppargc1a
Alias: PGC1|gb:dq017637|ppargc1al
Full Name: peroxisome proliferator-activated receptor gamma%2C coactivator 1 alpha
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 403898 bases
Position: chrNHOQ01001086.1:2268098-2671995
Accession: ZDB-GENE-080505-1
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023034	RRM_1	PF00076.22	9e-07	1	1
ENSGAFP00000023027	RRM_1	PF00076.22	1.7e-06	1	1
ENSGAFP00000023020	RRM_1	PF00076.22	1.7e-06	1	1
ENSGAFP00000023012	RRM_1	PF00076.22	1.8e-06	1	1
ENSGAFP00000022971	RRM_1	PF00076.22	1.8e-06	1	1
ENSGAFP00000023007	RRM_1	PF00076.22	1.8e-06	1	1
ENSGAFP00000022963	RRM_1	PF00076.22	1.8e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023243	-	4439	-	ENSGAFP00000023007	1334 (aa)	-	-
ENSGAFT00000023256	-	7089	-	ENSGAFP00000023020	1282 (aa)	-	-
ENSGAFT00000023263	-	6764	-	ENSGAFP00000023027	1272 (aa)	-	-
ENSGAFT00000023248	-	4364	-	ENSGAFP00000023012	1309 (aa)	-	-
ENSGAFT00000023207	-	4412	-	ENSGAFP00000022971	1325 (aa)	-	-
ENSGAFT00000023198	-	4460	-	ENSGAFP00000022963	1341 (aa)	-	-
ENSGAFT00000023270	-	2319	-	ENSGAFP00000023034	772 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015514's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015514's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015514	ppargc1a	100	53.513	ENSG00000109819	PPARGC1A	94	76.596	Homo_sapiens
ENSGAFG00000015514	ppargc1a	100	94.694	ENSAPOG00000018632	ppargc1a	99	95.436	Acanthochromis_polyacanthus
ENSGAFG00000015514	ppargc1a	64	79.878	ENSAMEG00000010421	PPARGC1A	88	80.114	Ailuropoda_melanoleuca
ENSGAFG00000015514	ppargc1a	100	77.200	ENSACIG00000009732	ppargc1a	100	94.606	Amphilophus_citrinellus
ENSGAFG00000015514	ppargc1a	100	94.694	ENSAOCG00000006754	ppargc1a	99	95.436	Amphiprion_ocellaris
ENSGAFG00000015514	ppargc1a	100	82.662	ENSAPEG00000022574	ppargc1a	99	95.436	Amphiprion_percula
ENSGAFG00000015514	ppargc1a	99	93.469	ENSATEG00000016702	ppargc1a	100	94.191	Anabas_testudineus
ENSGAFG00000015514	ppargc1a	100	53.176	ENSAPLG00000005303	PPARGC1A	67	51.220	Anas_platyrhynchos
ENSGAFG00000015514	ppargc1a	100	52.093	ENSACAG00000000741	PPARGC1A	80	78.977	Anolis_carolinensis
ENSGAFG00000015514	ppargc1a	100	53.981	ENSANAG00000035930	PPARGC1A	53	76.020	Aotus_nancymaae
ENSGAFG00000015514	ppargc1a	98	93.043	ENSACLG00000001002	ppargc1a	99	94.606	Astatotilapia_calliptera
ENSGAFG00000015514	ppargc1a	97	86.809	ENSAMXG00000002461	ppargc1a	88	87.349	Astyanax_mexicanus
ENSGAFG00000015514	ppargc1a	100	53.765	ENSBTAG00000017024	PPARGC1A	51	78.977	Bos_taurus
ENSGAFG00000015514	ppargc1a	100	53.513	ENSCJAG00000013024	PPARGC1A	52	80.114	Callithrix_jacchus
ENSGAFG00000015514	ppargc1a	100	53.638	ENSCAFG00000016519	PPARGC1A	88	80.000	Canis_familiaris
ENSGAFG00000015514	ppargc1a	97	52.778	ENSCAFG00020027242	PPARGC1A	87	80.000	Canis_lupus_dingo
ENSGAFG00000015514	ppargc1a	100	53.819	ENSCHIG00000015991	PPARGC1A	90	75.789	Capra_hircus
ENSGAFG00000015514	ppargc1a	100	53.747	ENSTSYG00000010439	PPARGC1A	53	75.510	Carlito_syrichta
ENSGAFG00000015514	ppargc1a	67	44.505	ENSCAPG00000005150	PPARGC1A	50	76.316	Cavia_aperea
ENSGAFG00000015514	ppargc1a	70	49.916	ENSCPOG00000001518	PPARGC1A	53	76.316	Cavia_porcellus
ENSGAFG00000015514	ppargc1a	100	53.747	ENSCCAG00000024681	PPARGC1A	53	76.020	Cebus_capucinus
ENSGAFG00000015514	ppargc1a	100	53.630	ENSCATG00000032575	PPARGC1A	50	79.375	Cercocebus_atys
ENSGAFG00000015514	ppargc1a	100	53.873	ENSCLAG00000002058	PPARGC1A	53	74.490	Chinchilla_lanigera
ENSGAFG00000015514	ppargc1a	100	53.630	ENSCSAG00000016575	PPARGC1A	53	75.510	Chlorocebus_sabaeus
ENSGAFG00000015514	ppargc1a	100	53.638	ENSCANG00000033426	PPARGC1A	53	76.842	Colobus_angolensis_palliatus
ENSGAFG00000015514	ppargc1a	100	54.235	ENSCGRG00001015534	Ppargc1a	87	73.469	Cricetulus_griseus_chok1gshd
ENSGAFG00000015514	ppargc1a	100	54.235	ENSCGRG00000000200	Ppargc1a	87	73.469	Cricetulus_griseus_crigri
ENSGAFG00000015514	ppargc1a	99	93.469	ENSCSEG00000006884	ppargc1a	97	95.671	Cynoglossus_semilaevis
ENSGAFG00000015514	ppargc1a	99	79.592	ENSCVAG00000016547	ppargc1a	100	84.228	Cyprinodon_variegatus
ENSGAFG00000015514	ppargc1a	76	85.380	ENSDARG00000067829	ppargc1a	91	85.845	Danio_rerio
ENSGAFG00000015514	ppargc1a	100	53.667	ENSDNOG00000041106	PPARGC1A	51	80.571	Dasypus_novemcinctus
ENSGAFG00000015514	ppargc1a	63	78.049	ENSDORG00000016276	Ppargc1a	89	73.980	Dipodomys_ordii
ENSGAFG00000015514	ppargc1a	100	52.934	ENSEASG00005007984	PPARGC1A	51	80.114	Equus_asinus_asinus
ENSGAFG00000015514	ppargc1a	98	52.449	ENSECAG00000009164	PPARGC1A	65	49.735	Equus_caballus
ENSGAFG00000015514	ppargc1a	98	53.430	ENSEEUG00000009219	PPARGC1A	88	78.409	Erinaceus_europaeus
ENSGAFG00000015514	ppargc1a	96	90.598	ENSELUG00000017027	ppargc1a	92	71.150	Esox_lucius
ENSGAFG00000015514	ppargc1a	100	53.497	ENSFCAG00000000043	PPARGC1A	88	79.545	Felis_catus
ENSGAFG00000015514	ppargc1a	98	52.998	ENSFALG00000009211	PPARGC1A	85	79.545	Ficedula_albicollis
ENSGAFG00000015514	ppargc1a	73	51.387	ENSFDAG00000005659	PPARGC1A	53	73.469	Fukomys_damarensis
ENSGAFG00000015514	ppargc1a	99	96.680	ENSFHEG00000021990	ppargc1a	98	96.680	Fundulus_heteroclitus
ENSGAFG00000015514	ppargc1a	100	53.647	ENSGALG00000042851	PPARGC1A	52	75.342	Gallus_gallus
ENSGAFG00000015514	ppargc1a	99	53.025	ENSGAGG00000007043	PPARGC1A	86	80.682	Gopherus_agassizii
ENSGAFG00000015514	ppargc1a	100	53.630	ENSGGOG00000009810	PPARGC1A	50	79.375	Gorilla_gorilla
ENSGAFG00000015514	ppargc1a	100	93.878	ENSHBUG00000005269	ppargc1a	100	95.021	Haplochromis_burtoni
ENSGAFG00000015514	ppargc1a	98	52.096	ENSHGLG00000007022	PPARGC1A	52	73.469	Heterocephalus_glaber_female
ENSGAFG00000015514	ppargc1a	100	52.526	ENSHGLG00100000133	PPARGC1A	53	73.469	Heterocephalus_glaber_male
ENSGAFG00000015514	ppargc1a	99	90.204	ENSHCOG00000014886	ppargc1a	95	90.871	Hippocampus_comes
ENSGAFG00000015514	ppargc1a	95	97.368	ENSIPUG00000020313	ppargc1a	59	97.368	Ictalurus_punctatus
ENSGAFG00000015514	ppargc1a	100	53.099	ENSSTOG00000012522	PPARGC1A	88	78.788	Ictidomys_tridecemlineatus
ENSGAFG00000015514	ppargc1a	99	93.061	ENSKMAG00000005390	ppargc1a	95	94.737	Kryptolebias_marmoratus
ENSGAFG00000015514	ppargc1a	98	94.191	ENSLBEG00000019562	ppargc1a	99	94.191	Labrus_bergylta
ENSGAFG00000015514	ppargc1a	91	83.041	ENSLACG00000014054	PPARGC1A	88	84.242	Latimeria_chalumnae
ENSGAFG00000015514	ppargc1a	69	56.322	ENSLOCG00000012350	ppargc1a	53	84.500	Lepisosteus_oculatus
ENSGAFG00000015514	ppargc1a	71	70.539	ENSLAFG00000012981	PPARGC1A	54	73.000	Loxodonta_africana
ENSGAFG00000015514	ppargc1a	100	53.630	ENSMFAG00000000534	PPARGC1A	50	79.375	Macaca_fascicularis
ENSGAFG00000015514	ppargc1a	100	54.655	ENSMMUG00000001844	PPARGC1A	51	79.375	Macaca_mulatta
ENSGAFG00000015514	ppargc1a	100	53.513	ENSMNEG00000028682	PPARGC1A	50	79.375	Macaca_nemestrina
ENSGAFG00000015514	ppargc1a	100	53.630	ENSMLEG00000034233	PPARGC1A	50	79.375	Mandrillus_leucophaeus
ENSGAFG00000015514	ppargc1a	99	94.286	ENSMAMG00000005531	ppargc1a	94	95.021	Mastacembelus_armatus
ENSGAFG00000015514	ppargc1a	100	93.469	ENSMZEG00005001739	ppargc1a	100	76.822	Maylandia_zebra
ENSGAFG00000015514	ppargc1a	100	53.176	ENSMGAG00000012485	PPARGC1A	68	50.967	Meleagris_gallopavo
ENSGAFG00000015514	ppargc1a	100	54.471	ENSMAUG00000011811	Ppargc1a	87	73.980	Mesocricetus_auratus
ENSGAFG00000015514	ppargc1a	100	53.630	ENSMICG00000015390	PPARGC1A	53	75.510	Microcebus_murinus
ENSGAFG00000015514	ppargc1a	100	54.118	ENSMOCG00000008765	Ppargc1a	87	73.980	Microtus_ochrogaster
ENSGAFG00000015514	ppargc1a	99	92.245	ENSMMOG00000011847	ppargc1a	94	93.361	Mola_mola
ENSGAFG00000015514	ppargc1a	63	80.488	ENSMODG00000000549	PPARGC1A	87	77.436	Monodelphis_domestica
ENSGAFG00000015514	ppargc1a	99	92.653	ENSMALG00000004625	ppargc1a	89	93.361	Monopterus_albus
ENSGAFG00000015514	ppargc1a	100	53.294	MGP_CAROLIEiJ_G0027213	Ppargc1a	87	72.449	Mus_caroli
ENSGAFG00000015514	ppargc1a	100	53.647	ENSMUSG00000029167	Ppargc1a	87	72.449	Mus_musculus
ENSGAFG00000015514	ppargc1a	100	53.081	MGP_PahariEiJ_G0016995	Ppargc1a	87	72.449	Mus_pahari
ENSGAFG00000015514	ppargc1a	100	53.592	MGP_SPRETEiJ_G0028208	Ppargc1a	87	71.939	Mus_spretus
ENSGAFG00000015514	ppargc1a	64	79.878	ENSMPUG00000016736	PPARGC1A	70	80.114	Mustela_putorius_furo
ENSGAFG00000015514	ppargc1a	100	53.684	ENSMLUG00000016307	PPARGC1A	66	70.539	Myotis_lucifugus
ENSGAFG00000015514	ppargc1a	100	53.310	ENSNGAG00000015090	Ppargc1a	88	78.182	Nannospalax_galili
ENSGAFG00000015514	ppargc1a	100	81.865	ENSNBRG00000023403	ppargc1a	99	95.021	Neolamprologus_brichardi
ENSGAFG00000015514	ppargc1a	100	52.674	ENSNLEG00000016760	PPARGC1A	53	70.408	Nomascus_leucogenys
ENSGAFG00000015514	ppargc1a	100	53.521	ENSOPRG00000012899	PPARGC1A	89	74.490	Ochotona_princeps
ENSGAFG00000015514	ppargc1a	100	72.579	ENSONIG00000007635	ppargc1a	98	88.362	Oreochromis_niloticus
ENSGAFG00000015514	ppargc1a	70	75.000	ENSOANG00000006680	PPARGC1A	88	80.114	Ornithorhynchus_anatinus
ENSGAFG00000015514	ppargc1a	100	53.294	ENSOCUG00000014668	PPARGC1A	90	75.000	Oryctolagus_cuniculus
ENSGAFG00000015514	ppargc1a	100	93.878	ENSORLG00000004788	ppargc1a	99	94.606	Oryzias_latipes
ENSGAFG00000015514	ppargc1a	99	93.878	ENSORLG00020014690	ppargc1a	95	94.606	Oryzias_latipes_hni
ENSGAFG00000015514	ppargc1a	100	93.469	ENSORLG00015012206	ppargc1a	99	96.053	Oryzias_latipes_hsok
ENSGAFG00000015514	ppargc1a	99	93.469	ENSOMEG00000000670	ppargc1a	100	94.191	Oryzias_melastigma
ENSGAFG00000015514	ppargc1a	100	52.907	ENSOGAG00000014559	PPARGC1A	53	73.980	Otolemur_garnettii
ENSGAFG00000015514	ppargc1a	66	79.394	ENSOARG00000005581	PPARGC1A	86	79.545	Ovis_aries
ENSGAFG00000015514	ppargc1a	100	53.513	ENSPPAG00000034694	PPARGC1A	53	75.510	Pan_paniscus
ENSGAFG00000015514	ppargc1a	100	53.497	ENSPPRG00000001711	PPARGC1A	88	80.000	Panthera_pardus
ENSGAFG00000015514	ppargc1a	100	53.497	ENSPTIG00000007378	PPARGC1A	88	80.000	Panthera_tigris_altaica
ENSGAFG00000015514	ppargc1a	100	53.630	ENSPTRG00000015954	PPARGC1A	53	75.510	Pan_troglodytes
ENSGAFG00000015514	ppargc1a	100	53.341	ENSPANG00000005420	PPARGC1A	50	79.375	Papio_anubis
ENSGAFG00000015514	ppargc1a	99	69.421	ENSPKIG00000002531	ppargc1a	86	75.000	Paramormyrops_kingsleyae
ENSGAFG00000015514	ppargc1a	100	54.009	ENSPSIG00000011790	PPARGC1A	86	80.114	Pelodiscus_sinensis
ENSGAFG00000015514	ppargc1a	100	68.529	ENSPMGG00000019204	ppargc1a	92	87.137	Periophthalmus_magnuspinnatus
ENSGAFG00000015514	ppargc1a	100	54.172	ENSPEMG00000010892	Ppargc1a	87	74.112	Peromyscus_maniculatus_bairdii
ENSGAFG00000015514	ppargc1a	100	54.353	ENSPCIG00000015835	PPARGC1A	90	75.635	Phascolarctos_cinereus
ENSGAFG00000015514	ppargc1a	100	79.850	ENSPFOG00000001263	ppargc1a	98	97.203	Poecilia_formosa
ENSGAFG00000015514	ppargc1a	100	88.579	ENSPLAG00000002827	ppargc1a	98	98.340	Poecilia_latipinna
ENSGAFG00000015514	ppargc1a	100	97.551	ENSPMEG00000000720	ppargc1a	100	93.417	Poecilia_mexicana
ENSGAFG00000015514	ppargc1a	99	98.340	ENSPREG00000019171	ppargc1a	99	98.340	Poecilia_reticulata
ENSGAFG00000015514	ppargc1a	100	53.630	ENSPPYG00000014640	PPARGC1A	53	75.510	Pongo_abelii
ENSGAFG00000015514	ppargc1a	100	52.521	ENSPCAG00000016308	PPARGC1A	51	76.571	Procavia_capensis
ENSGAFG00000015514	ppargc1a	100	53.864	ENSPCOG00000022858	PPARGC1A	52	80.114	Propithecus_coquereli
ENSGAFG00000015514	ppargc1a	73	51.311	ENSPVAG00000004965	PPARGC1A	51	78.977	Pteropus_vampyrus
ENSGAFG00000015514	ppargc1a	100	93.878	ENSPNYG00000006846	ppargc1a	100	95.021	Pundamilia_nyererei
ENSGAFG00000015514	ppargc1a	97	87.660	ENSPNAG00000010393	ppargc1a	88	87.952	Pygocentrus_nattereri
ENSGAFG00000015514	ppargc1a	100	53.294	ENSRNOG00000004473	Ppargc1a	63	69.710	Rattus_norvegicus
ENSGAFG00000015514	ppargc1a	100	53.630	ENSRBIG00000032333	PPARGC1A	53	76.842	Rhinopithecus_bieti
ENSGAFG00000015514	ppargc1a	100	53.630	ENSRROG00000010419	PPARGC1A	53	76.842	Rhinopithecus_roxellana
ENSGAFG00000015514	ppargc1a	100	53.864	ENSSBOG00000006423	PPARGC1A	53	76.020	Saimiri_boliviensis_boliviensis
ENSGAFG00000015514	ppargc1a	100	54.492	ENSSHAG00000010033	PPARGC1A	84	76.410	Sarcophilus_harrisii
ENSGAFG00000015514	ppargc1a	96	74.779	ENSSFOG00015001633	ppargc1a	84	71.849	Scleropages_formosus
ENSGAFG00000015514	ppargc1a	100	53.172	ENSSFOG00015018522	ppargc1a	70	53.202	Scleropages_formosus
ENSGAFG00000015514	ppargc1a	100	92.245	ENSSMAG00000011571	ppargc1a	95	94.737	Scophthalmus_maximus
ENSGAFG00000015514	ppargc1a	100	80.175	ENSSDUG00000007408	ppargc1a	97	96.104	Seriola_dumerili
ENSGAFG00000015514	ppargc1a	100	72.009	ENSSLDG00000006987	ppargc1a	93	95.021	Seriola_lalandi_dorsalis
ENSGAFG00000015514	ppargc1a	89	76.800	ENSSARG00000000575	PPARGC1A	83	76.800	Sorex_araneus
ENSGAFG00000015514	ppargc1a	100	53.919	ENSSPUG00000013556	PPARGC1A	86	81.250	Sphenodon_punctatus
ENSGAFG00000015514	ppargc1a	98	94.348	ENSSPAG00000023514	ppargc1a	99	95.436	Stegastes_partitus
ENSGAFG00000015514	ppargc1a	99	53.318	ENSSSCG00000029275	PPARGC1A	88	80.114	Sus_scrofa
ENSGAFG00000015514	ppargc1a	100	53.882	ENSTGUG00000009487	PPARGC1A	51	80.682	Taeniopygia_guttata
ENSGAFG00000015514	ppargc1a	89	88.824	ENSTRUG00000007210	ppargc1a	85	89.157	Takifugu_rubripes
ENSGAFG00000015514	ppargc1a	100	52.521	ENSTTRG00000005327	PPARGC1A	88	80.000	Tursiops_truncatus
ENSGAFG00000015514	ppargc1a	60	79.141	ENSUAMG00000020843	PPARGC1A	85	80.114	Ursus_americanus
ENSGAFG00000015514	ppargc1a	63	79.878	ENSUMAG00000003557	PPARGC1A	88	80.114	Ursus_maritimus
ENSGAFG00000015514	ppargc1a	58	79.394	ENSVPAG00000003478	PPARGC1A	88	79.545	Vicugna_pacos
ENSGAFG00000015514	ppargc1a	100	53.638	ENSVVUG00000013365	PPARGC1A	88	80.000	Vulpes_vulpes
ENSGAFG00000015514	ppargc1a	100	53.262	ENSXETG00000020468	ppargc1a	76	78.977	Xenopus_tropicalis
ENSGAFG00000015514	ppargc1a	98	97.917	ENSXCOG00000004835	ppargc1a	94	97.925	Xiphophorus_couchianus
ENSGAFG00000015514	ppargc1a	99	97.917	ENSXMAG00000007748	ppargc1a	100	96.305	Xiphophorus_maculatus