EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000015558 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 11451 bases
Position: chrNHOQ01002733.1:6675233-6686683
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023041	R3H	PF01424.22	8.1e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023277	-	5550	-	ENSGAFP00000023041	640 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015558's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015558	-	91	32.656	ENSG00000179912	R3HDM2	54	57.616	Homo_sapiens
ENSGAFG00000015558	-	100	71.300	ENSAPOG00000021873	-	100	72.048	Acanthochromis_polyacanthus
ENSGAFG00000015558	-	88	35.982	ENSAMEG00000004812	R3HDM2	62	37.160	Ailuropoda_melanoleuca
ENSGAFG00000015558	-	100	72.455	ENSAOCG00000003840	-	100	72.754	Amphiprion_ocellaris
ENSGAFG00000015558	-	72	38.976	ENSAPEG00000008851	r3hdm2	57	36.700	Amphiprion_percula
ENSGAFG00000015558	-	100	72.455	ENSAPEG00000014325	-	100	73.054	Amphiprion_percula
ENSGAFG00000015558	-	100	70.165	ENSATEG00000015519	-	100	70.615	Anabas_testudineus
ENSGAFG00000015558	-	50	46.608	ENSACAG00000006388	R3HDM2	51	37.158	Anolis_carolinensis
ENSGAFG00000015558	-	91	33.382	ENSANAG00000025397	-	61	34.150	Aotus_nancymaae
ENSGAFG00000015558	-	91	32.993	ENSCJAG00000007365	R3HDM2	60	35.123	Callithrix_jacchus
ENSGAFG00000015558	-	88	35.629	ENSCAFG00000000215	R3HDM2	61	36.802	Canis_familiaris
ENSGAFG00000015558	-	88	35.994	ENSCAFG00020023713	R3HDM2	62	37.178	Canis_lupus_dingo
ENSGAFG00000015558	-	69	37.093	ENSTSYG00000001449	R3HDM2	61	33.588	Carlito_syrichta
ENSGAFG00000015558	-	91	32.993	ENSCCAG00000026083	R3HDM2	68	34.969	Cebus_capucinus
ENSGAFG00000015558	-	91	35.303	ENSCATG00000036929	R3HDM2	62	36.874	Cercocebus_atys
ENSGAFG00000015558	-	88	35.171	ENSCLAG00000011997	R3HDM2	62	36.898	Chinchilla_lanigera
ENSGAFG00000015558	-	91	34.914	ENSCSAG00000004911	R3HDM2	62	35.897	Chlorocebus_sabaeus
ENSGAFG00000015558	-	79	39.929	ENSCPBG00000013922	R3HDM2	52	40.204	Chrysemys_picta_bellii
ENSGAFG00000015558	-	91	35.507	ENSCANG00000043807	R3HDM2	62	36.986	Colobus_angolensis_palliatus
ENSGAFG00000015558	-	100	83.746	ENSCVAG00000007202	-	100	83.901	Cyprinodon_variegatus
ENSGAFG00000015558	-	69	40.000	ENSDNOG00000015033	R3HDM2	59	34.828	Dasypus_novemcinctus
ENSGAFG00000015558	-	69	41.189	ENSEASG00005007091	R3HDM2	62	36.818	Equus_asinus_asinus
ENSGAFG00000015558	-	69	42.521	ENSECAG00000003157	R3HDM2	62	37.386	Equus_caballus
ENSGAFG00000015558	-	99	44.017	ENSELUG00000002532	-	99	44.353	Esox_lucius
ENSGAFG00000015558	-	69	41.113	ENSFCAG00000000192	R3HDM2	63	36.818	Felis_catus
ENSGAFG00000015558	-	88	35.171	ENSFALG00000000255	R3HDM2	72	35.528	Ficedula_albicollis
ENSGAFG00000015558	-	50	46.429	ENSFDAG00000019385	R3HDM2	62	37.199	Fukomys_damarensis
ENSGAFG00000015558	-	100	84.961	ENSFHEG00000007936	-	100	84.961	Fundulus_heteroclitus
ENSGAFG00000015558	-	68	45.062	ENSGMOG00000010391	-	98	45.253	Gadus_morhua
ENSGAFG00000015558	-	89	37.382	ENSGALG00000043736	R3HDM2	53	37.157	Gallus_gallus
ENSGAFG00000015558	-	70	55.373	ENSGACG00000005581	-	99	55.315	Gasterosteus_aculeatus
ENSGAFG00000015558	-	79	40.426	ENSGAGG00000017797	R3HDM2	52	40.545	Gopherus_agassizii
ENSGAFG00000015558	-	91	35.303	ENSGGOG00000015007	R3HDM2	62	36.874	Gorilla_gorilla
ENSGAFG00000015558	-	100	68.713	ENSHBUG00000018525	-	100	69.012	Haplochromis_burtoni
ENSGAFG00000015558	-	88	34.277	ENSHGLG00000010434	-	62	36.295	Heterocephalus_glaber_female
ENSGAFG00000015558	-	88	34.277	ENSHGLG00100004183	-	62	36.295	Heterocephalus_glaber_male
ENSGAFG00000015558	-	52	44.828	ENSIPUG00000023873	r3hdm2	50	39.139	Ictalurus_punctatus
ENSGAFG00000015558	-	50	41.390	ENSSTOG00000013424	R3HDM2	59	33.851	Ictidomys_tridecemlineatus
ENSGAFG00000015558	-	88	35.285	ENSJJAG00000010001	R3hdm2	62	36.530	Jaculus_jaculus
ENSGAFG00000015558	-	100	67.727	ENSKMAG00000004052	-	100	69.033	Kryptolebias_marmoratus
ENSGAFG00000015558	-	81	37.057	ENSKMAG00000012695	r3hdm2	52	37.790	Kryptolebias_marmoratus
ENSGAFG00000015558	-	96	67.834	ENSLBEG00000002779	-	98	68.146	Labrus_bergylta
ENSGAFG00000015558	-	78	39.161	ENSLACG00000019064	r3hdm2	54	39.787	Latimeria_chalumnae
ENSGAFG00000015558	-	75	39.530	ENSLAFG00000006510	R3HDM2	62	36.930	Loxodonta_africana
ENSGAFG00000015558	-	91	35.217	ENSMFAG00000036385	R3HDM2	62	36.682	Macaca_fascicularis
ENSGAFG00000015558	-	91	35.217	ENSMMUG00000021789	R3HDM2	62	36.682	Macaca_mulatta
ENSGAFG00000015558	-	91	35.303	ENSMNEG00000025314	R3HDM2	62	36.762	Macaca_nemestrina
ENSGAFG00000015558	-	91	35.303	ENSMLEG00000028915	R3HDM2	62	36.874	Mandrillus_leucophaeus
ENSGAFG00000015558	-	100	71.235	ENSMAMG00000011755	-	100	71.235	Mastacembelus_armatus
ENSGAFG00000015558	-	50	46.512	ENSMGAG00000007123	-	90	48.930	Meleagris_gallopavo
ENSGAFG00000015558	-	88	32.436	ENSMICG00000012389	R3HDM2	60	36.252	Microcebus_murinus
ENSGAFG00000015558	-	69	40.632	ENSMOCG00000014425	R3hdm2	62	35.542	Microtus_ochrogaster
ENSGAFG00000015558	-	88	35.917	MGP_CAROLIEiJ_G0015896	R3hdm2	62	36.652	Mus_caroli
ENSGAFG00000015558	-	88	36.012	ENSMUSG00000025404	R3hdm2	62	36.556	Mus_musculus
ENSGAFG00000015558	-	88	34.694	MGP_PahariEiJ_G0031189	R3hdm2	62	36.310	Mus_pahari
ENSGAFG00000015558	-	88	35.958	MGP_SPRETEiJ_G0016722	R3hdm2	62	36.501	Mus_spretus
ENSGAFG00000015558	-	88	36.527	ENSMPUG00000001818	R3HDM2	61	37.557	Mustela_putorius_furo
ENSGAFG00000015558	-	88	36.228	ENSNGAG00000018800	R3hdm2	62	37.082	Nannospalax_galili
ENSGAFG00000015558	-	91	35.456	ENSNLEG00000017351	R3HDM2	62	36.778	Nomascus_leucogenys
ENSGAFG00000015558	-	100	69.474	ENSONIG00000002315	-	100	69.774	Oreochromis_niloticus
ENSGAFG00000015558	-	88	35.661	ENSOCUG00000013258	R3HDM2	62	36.350	Oryctolagus_cuniculus
ENSGAFG00000015558	-	100	60.542	ENSORLG00000011606	-	100	61.329	Oryzias_latipes
ENSGAFG00000015558	-	94	60.877	ENSORLG00020019613	-	83	61.726	Oryzias_latipes_hni
ENSGAFG00000015558	-	73	52.574	ENSORLG00015011568	-	92	52.416	Oryzias_latipes_hsok
ENSGAFG00000015558	-	100	62.256	ENSOMEG00000009631	-	100	61.805	Oryzias_melastigma
ENSGAFG00000015558	-	100	62.349	ENSOMEG00000016256	-	100	61.898	Oryzias_melastigma
ENSGAFG00000015558	-	88	32.934	ENSOGAG00000012055	R3HDM2	61	34.146	Otolemur_garnettii
ENSGAFG00000015558	-	50	44.012	ENSOGAG00000027966	-	63	36.156	Otolemur_garnettii
ENSGAFG00000015558	-	91	35.303	ENSPPAG00000034395	R3HDM2	62	36.874	Pan_paniscus
ENSGAFG00000015558	-	69	37.229	ENSPPRG00000009240	R3HDM2	61	34.046	Panthera_pardus
ENSGAFG00000015558	-	69	37.229	ENSPTIG00000008752	R3HDM2	61	34.046	Panthera_tigris_altaica
ENSGAFG00000015558	-	91	35.217	ENSPTRG00000046457	R3HDM2	62	36.682	Pan_troglodytes
ENSGAFG00000015558	-	88	33.183	ENSPANG00000024002	R3HDM2	62	33.994	Papio_anubis
ENSGAFG00000015558	-	64	51.111	ENSPMGG00000001982	-	92	51.333	Periophthalmus_magnuspinnatus
ENSGAFG00000015558	-	69	41.401	ENSPEMG00000015964	R3hdm2	62	36.501	Peromyscus_maniculatus_bairdii
ENSGAFG00000015558	-	88	33.133	ENSPCIG00000023841	R3HDM2	61	34.604	Phascolarctos_cinereus
ENSGAFG00000015558	-	100	97.344	ENSPFOG00000008096	-	100	97.344	Poecilia_formosa
ENSGAFG00000015558	-	100	96.719	ENSPLAG00000006973	-	100	96.719	Poecilia_latipinna
ENSGAFG00000015558	-	100	97.188	ENSPMEG00000014457	-	100	97.188	Poecilia_mexicana
ENSGAFG00000015558	-	88	32.428	ENSPCOG00000013201	R3HDM2	61	33.691	Propithecus_coquereli
ENSGAFG00000015558	-	88	35.778	ENSPVAG00000003967	R3HDM2	62	37.121	Pteropus_vampyrus
ENSGAFG00000015558	-	50	45.646	ENSPNYG00000013479	r3hdm2	60	36.715	Pundamilia_nyererei
ENSGAFG00000015558	-	58	43.702	ENSPNAG00000017473	r3hdm2	50	38.710	Pygocentrus_nattereri
ENSGAFG00000015558	-	88	35.320	ENSRNOG00000007801	R3hdm2	62	36.556	Rattus_norvegicus
ENSGAFG00000015558	-	92	32.756	ENSRBIG00000037403	R3HDM2	62	33.788	Rhinopithecus_bieti
ENSGAFG00000015558	-	91	35.456	ENSRROG00000022271	R3HDM2	62	36.778	Rhinopithecus_roxellana
ENSGAFG00000015558	-	91	32.993	ENSSBOG00000023547	R3HDM2	61	34.202	Saimiri_boliviensis_boliviensis
ENSGAFG00000015558	-	78	39.698	ENSSHAG00000003511	R3HDM2	62	37.387	Sarcophilus_harrisii
ENSGAFG00000015558	-	93	72.712	ENSSMAG00000010735	-	98	72.712	Scophthalmus_maximus
ENSGAFG00000015558	-	100	71.707	ENSSDUG00000009188	-	100	71.707	Seriola_dumerili
ENSGAFG00000015558	-	73	54.234	ENSSLDG00000010034	-	96	54.990	Seriola_lalandi_dorsalis
ENSGAFG00000015558	-	79	37.143	ENSSPUG00000014132	R3HDM2	51	37.819	Sphenodon_punctatus
ENSGAFG00000015558	-	72	39.096	ENSSPAG00000022594	r3hdm2	57	34.783	Stegastes_partitus
ENSGAFG00000015558	-	100	71.642	ENSSPAG00000016856	-	100	71.940	Stegastes_partitus
ENSGAFG00000015558	-	74	34.813	ENSSSCG00000026498	R3HDM2	63	35.702	Sus_scrofa
ENSGAFG00000015558	-	92	35.362	ENSTGUG00000015881	R3HDM2	84	36.447	Taeniopygia_guttata
ENSGAFG00000015558	-	77	67.773	ENSTRUG00000013414	-	100	68.164	Takifugu_rubripes
ENSGAFG00000015558	-	65	55.532	ENSTNIG00000016976	-	96	55.675	Tetraodon_nigroviridis
ENSGAFG00000015558	-	88	35.832	ENSUAMG00000020913	R3HDM2	62	36.405	Ursus_americanus
ENSGAFG00000015558	-	81	35.784	ENSUMAG00000019179	R3HDM2	64	35.913	Ursus_maritimus
ENSGAFG00000015558	-	88	35.982	ENSVVUG00000018014	R3HDM2	61	37.160	Vulpes_vulpes
ENSGAFG00000015558	-	76	39.643	ENSXETG00000017153	r3hdm2	62	36.499	Xenopus_tropicalis
ENSGAFG00000015558	-	78	69.138	ENSXCOG00000020143	-	95	69.857	Xiphophorus_couchianus
ENSGAFG00000015558	-	100	98.281	ENSXMAG00000002994	-	100	98.281	Xiphophorus_maculatus