EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000015702 (Gene tree)
Gene ID: -
Gene Symbol: zgc:171927
Alias: -
Full Name: zgc:171927
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 5070 bases
Position: chrNHOQ01001755.1:324529-329598
Accession: ZDB-GENE-070822-21
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023251	MMR_HSR1	PF01926.23	9.3e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023488	-	1811	-	ENSGAFP00000023251	249 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015702's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015702's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000015702	zgc:171927	67	46.243	ENSGAFG00000021202	zgc:101559	74	46.243
ENSGAFG00000015702	zgc:171927	65	45.455	ENSGAFG00000006932	-	77	45.455
ENSGAFG00000015702	zgc:171927	65	40.994	ENSGAFG00000010916	rab6bb	77	40.994
ENSGAFG00000015702	zgc:171927	65	37.805	ENSGAFG00000021814	hrasb	86	37.805
ENSGAFG00000015702	zgc:171927	65	40.994	ENSGAFG00000006356	rab6a	77	40.994
ENSGAFG00000015702	zgc:171927	71	42.614	ENSGAFG00000003642	-	89	39.806
ENSGAFG00000015702	zgc:171927	67	49.701	ENSGAFG00000006846	rab2a	79	49.701
ENSGAFG00000015702	zgc:171927	78	30.476	ENSGAFG00000007473	rasl11a	82	30.769
ENSGAFG00000015702	zgc:171927	65	52.469	ENSGAFG00000002790	rab18a	79	52.469
ENSGAFG00000015702	zgc:171927	65	38.788	ENSGAFG00000020102	si:dkey-13a21.4	80	38.788
ENSGAFG00000015702	zgc:171927	66	39.053	ENSGAFG00000020476	RAB7A	82	39.053
ENSGAFG00000015702	zgc:171927	63	35.849	ENSGAFG00000005188	rabl2	68	35.849
ENSGAFG00000015702	zgc:171927	65	31.395	ENSGAFG00000014541	rras2	82	31.395
ENSGAFG00000015702	zgc:171927	59	42.763	ENSGAFG00000015249	-	63	42.763
ENSGAFG00000015702	zgc:171927	63	49.367	ENSGAFG00000017305	RAB15	80	57.143
ENSGAFG00000015702	zgc:171927	77	76.410	ENSGAFG00000001289	rab1ab	96	76.410
ENSGAFG00000015702	zgc:171927	65	40.994	ENSGAFG00000017270	rab6ba	77	40.994
ENSGAFG00000015702	zgc:171927	68	44.444	ENSGAFG00000004604	RAB39B	80	44.444
ENSGAFG00000015702	zgc:171927	63	37.342	ENSGAFG00000007684	rab23	83	37.059
ENSGAFG00000015702	zgc:171927	67	52.410	ENSGAFG00000016549	rab11a	77	52.410
ENSGAFG00000015702	zgc:171927	65	39.877	ENSGAFG00000021765	kras	91	38.728
ENSGAFG00000015702	zgc:171927	69	33.143	ENSGAFG00000020906	rheb	90	33.143
ENSGAFG00000015702	zgc:171927	69	36.932	ENSGAFG00000004099	rab9b	77	36.932
ENSGAFG00000015702	zgc:171927	68	35.088	ENSGAFG00000018295	si:ch73-116o1.2	80	35.714
ENSGAFG00000015702	zgc:171927	68	41.618	ENSGAFG00000008183	si:dkey-34d22.5	78	41.618
ENSGAFG00000015702	zgc:171927	65	35.366	ENSGAFG00000010541	rras	83	35.366
ENSGAFG00000015702	zgc:171927	75	37.968	ENSGAFG00000019872	rab41	85	37.968
ENSGAFG00000015702	zgc:171927	65	42.857	ENSGAFG00000019659	rab33ba	72	42.857
ENSGAFG00000015702	zgc:171927	65	33.129	ENSGAFG00000021738	rhebl1	88	33.129
ENSGAFG00000015702	zgc:171927	63	39.375	ENSGAFG00000015135	rab36	62	39.375
ENSGAFG00000015702	zgc:171927	73	46.032	ENSGAFG00000008560	rab18b	92	46.032
ENSGAFG00000015702	zgc:171927	78	76.289	ENSGAFG00000000918	-	94	76.289
ENSGAFG00000015702	zgc:171927	77	53.646	ENSGAFG00000014787	-	95	53.646
ENSGAFG00000015702	zgc:171927	65	45.455	ENSGAFG00000002141	rab42a	76	45.455
ENSGAFG00000015702	zgc:171927	68	36.994	ENSGAFG00000018916	-	75	36.994
ENSGAFG00000015702	zgc:171927	68	36.994	ENSGAFG00000000591	rab9a	78	36.994
ENSGAFG00000015702	zgc:171927	63	64.557	ENSGAFG00000005388	si:dkey-16l2.16	75	64.557
ENSGAFG00000015702	zgc:171927	77	31.500	ENSGAFG00000000629	RAB29	97	31.500
ENSGAFG00000015702	zgc:171927	84	43.541	ENSGAFG00000007102	rab11bb	95	43.541
ENSGAFG00000015702	zgc:171927	50	32.000	ENSGAFG00000017776	arl8a	70	32.000
ENSGAFG00000015702	zgc:171927	71	45.455	ENSGAFG00000011619	rab5aa	81	45.455
ENSGAFG00000015702	zgc:171927	84	45.455	ENSGAFG00000020309	rab30	96	45.455
ENSGAFG00000015702	zgc:171927	84	71.770	ENSGAFG00000019305	rab1ba	98	71.770
ENSGAFG00000015702	zgc:171927	82	36.321	ENSGAFG00000012579	rab34a	77	36.321
ENSGAFG00000015702	zgc:171927	84	42.381	ENSGAFG00000011713	rab25a	86	53.521
ENSGAFG00000015702	zgc:171927	66	50.000	ENSGAFG00000002756	rab15	77	50.000
ENSGAFG00000015702	zgc:171927	65	41.317	ENSGAFG00000015490	rab33a	60	41.317
ENSGAFG00000015702	zgc:171927	84	43.062	ENSGAFG00000021725	rab11al	95	43.062
ENSGAFG00000015702	zgc:171927	84	41.627	ENSGAFG00000021724	rab25b	95	41.627
ENSGAFG00000015702	zgc:171927	66	39.053	ENSGAFG00000021688	-	82	39.053
ENSGAFG00000015702	zgc:171927	65	45.399	ENSGAFG00000000884	rab5c	85	43.158
ENSGAFG00000015702	zgc:171927	69	42.442	ENSGAFG00000014730	-	85	42.442
ENSGAFG00000015702	zgc:171927	71	40.449	ENSGAFG00000001301	rab22a	90	40.449
ENSGAFG00000015702	zgc:171927	67	51.205	ENSGAFG00000005679	rab11ba	76	51.205
ENSGAFG00000015702	zgc:171927	68	45.882	ENSGAFG00000005477	rab4a	80	45.882

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015702	zgc:171927	84	93.301	ENSAPOG00000004980	-	98	93.301	Acanthochromis_polyacanthus
ENSGAFG00000015702	zgc:171927	84	92.823	ENSACIG00000009006	zgc:171927	98	92.823	Amphilophus_citrinellus
ENSGAFG00000015702	zgc:171927	57	92.199	ENSAOCG00000013808	-	98	95.276	Amphiprion_ocellaris
ENSGAFG00000015702	zgc:171927	84	90.431	ENSAOCG00000024149	-	98	90.431	Amphiprion_ocellaris
ENSGAFG00000015702	zgc:171927	84	90.909	ENSAPEG00000022171	zgc:171927	96	90.909	Amphiprion_percula
ENSGAFG00000015702	zgc:171927	84	91.866	ENSATEG00000003430	zgc:171927	98	91.866	Anabas_testudineus
ENSGAFG00000015702	zgc:171927	84	92.823	ENSACLG00000013734	-	98	92.823	Astatotilapia_calliptera
ENSGAFG00000015702	zgc:171927	84	78.095	ENSAMXG00000039486	zgc:171927	98	78.095	Astyanax_mexicanus
ENSGAFG00000015702	zgc:171927	84	89.474	ENSCSEG00000014416	zgc:171927	98	89.474	Cynoglossus_semilaevis
ENSGAFG00000015702	zgc:171927	84	93.301	ENSCVAG00000009222	zgc:171927	98	93.301	Cyprinodon_variegatus
ENSGAFG00000015702	zgc:171927	84	77.143	ENSDARG00000033056	zgc:171927	98	77.143	Danio_rerio
ENSGAFG00000015702	zgc:171927	84	78.199	ENSELUG00000011680	zgc:171927	98	78.199	Esox_lucius
ENSGAFG00000015702	zgc:171927	84	93.780	ENSFHEG00000022176	zgc:171927	98	93.780	Fundulus_heteroclitus
ENSGAFG00000015702	zgc:171927	86	77.778	ENSGMOG00000004979	-	99	77.778	Gadus_morhua
ENSGAFG00000015702	zgc:171927	88	86.425	ENSGACG00000013401	zgc:171927	100	86.425	Gasterosteus_aculeatus
ENSGAFG00000015702	zgc:171927	84	92.823	ENSHBUG00000002397	-	98	92.823	Haplochromis_burtoni
ENSGAFG00000015702	zgc:171927	84	92.344	ENSKMAG00000009856	zgc:171927	98	92.344	Kryptolebias_marmoratus
ENSGAFG00000015702	zgc:171927	84	90.000	ENSLBEG00000027226	-	91	89.252	Labrus_bergylta
ENSGAFG00000015702	zgc:171927	84	89.474	ENSLBEG00000005791	-	98	89.474	Labrus_bergylta
ENSGAFG00000015702	zgc:171927	86	70.370	ENSLOCG00000014692	zgc:171927	99	70.370	Lepisosteus_oculatus
ENSGAFG00000015702	zgc:171927	84	89.952	ENSMAMG00000020135	zgc:171927	98	89.952	Mastacembelus_armatus
ENSGAFG00000015702	zgc:171927	84	92.823	ENSMZEG00005024685	-	98	92.823	Maylandia_zebra
ENSGAFG00000015702	zgc:171927	84	86.124	ENSMMOG00000009833	-	98	86.124	Mola_mola
ENSGAFG00000015702	zgc:171927	84	88.995	ENSMALG00000021129	zgc:171927	98	88.995	Monopterus_albus
ENSGAFG00000015702	zgc:171927	87	90.783	ENSNBRG00000006202	zgc:171927	100	90.783	Neolamprologus_brichardi
ENSGAFG00000015702	zgc:171927	84	89.474	ENSORLG00000000602	zgc:171927	98	89.474	Oryzias_latipes
ENSGAFG00000015702	zgc:171927	84	89.474	ENSORLG00020021071	zgc:171927	98	89.474	Oryzias_latipes_hni
ENSGAFG00000015702	zgc:171927	84	89.474	ENSORLG00015010098	zgc:171927	98	89.474	Oryzias_latipes_hsok
ENSGAFG00000015702	zgc:171927	84	90.909	ENSOMEG00000020594	zgc:171927	98	90.909	Oryzias_melastigma
ENSGAFG00000015702	zgc:171927	84	96.172	ENSPFOG00000013810	zgc:171927	96	96.172	Poecilia_formosa
ENSGAFG00000015702	zgc:171927	84	95.694	ENSPLAG00000005869	zgc:171927	98	95.694	Poecilia_latipinna
ENSGAFG00000015702	zgc:171927	87	93.981	ENSPMEG00000022350	zgc:171927	98	96.172	Poecilia_mexicana
ENSGAFG00000015702	zgc:171927	84	97.129	ENSPREG00000017517	zgc:171927	98	97.129	Poecilia_reticulata
ENSGAFG00000015702	zgc:171927	84	92.823	ENSPNYG00000007520	-	98	92.823	Pundamilia_nyererei
ENSGAFG00000015702	zgc:171927	84	78.095	ENSPNAG00000029574	zgc:171927	98	78.095	Pygocentrus_nattereri
ENSGAFG00000015702	zgc:171927	84	76.667	ENSSFOG00015005464	zgc:171927	96	76.667	Scleropages_formosus
ENSGAFG00000015702	zgc:171927	84	89.952	ENSSMAG00000004416	-	98	89.952	Scophthalmus_maximus
ENSGAFG00000015702	zgc:171927	84	93.301	ENSSDUG00000004445	zgc:171927	98	93.301	Seriola_dumerili
ENSGAFG00000015702	zgc:171927	84	93.301	ENSSLDG00000018024	zgc:171927	98	93.301	Seriola_lalandi_dorsalis
ENSGAFG00000015702	zgc:171927	84	92.344	ENSSPAG00000013533	zgc:171927	98	92.344	Stegastes_partitus
ENSGAFG00000015702	zgc:171927	84	97.608	ENSXCOG00000010695	zgc:171927	98	97.608	Xiphophorus_couchianus
ENSGAFG00000015702	zgc:171927	84	97.129	ENSXMAG00000004683	zgc:171927	98	97.129	Xiphophorus_maculatus