EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000015819 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: im:7148349|si:ch211-125c5.1
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 28431 bases
Position: chrNHOQ01000099.1:806310-834740
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023431	RRM_5	PF13893.6	1.9e-07	1	2
ENSGAFP00000023431	RRM_5	PF13893.6	1.9e-07	2	2
ENSGAFP00000023431	RRM_1	PF00076.22	3.8e-40	1	3
ENSGAFP00000023431	RRM_1	PF00076.22	3.8e-40	2	3
ENSGAFP00000023431	RRM_1	PF00076.22	3.8e-40	3	3
ENSGAFP00000023440	RRM_1	PF00076.22	1.2e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023678	-	13181	-	ENSGAFP00000023431	3527 (aa)	-	-
ENSGAFT00000023687	-	858	-	ENSGAFP00000023440	285 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015819's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015819	-	90	74.340	ENSG00000065526	SPEN	85	90.476	Homo_sapiens
ENSGAFG00000015819	-	97	83.432	ENSAPOG00000011411	si:ch1073-335m2.2	98	83.432	Acanthochromis_polyacanthus
ENSGAFG00000015819	-	88	96.067	ENSAPOG00000009853	-	87	96.089	Acanthochromis_polyacanthus
ENSGAFG00000015819	-	91	73.408	ENSAMEG00000011817	SPEN	96	45.404	Ailuropoda_melanoleuca
ENSGAFG00000015819	-	85	77.444	ENSAOCG00000008077	si:ch1073-335m2.2	98	77.444	Amphiprion_ocellaris
ENSGAFG00000015819	-	88	96.067	ENSAOCG00000014505	-	100	79.307	Amphiprion_ocellaris
ENSGAFG00000015819	-	97	83.432	ENSAPEG00000013515	si:ch1073-335m2.2	99	83.432	Amphiprion_percula
ENSGAFG00000015819	-	88	96.067	ENSAPEG00000010288	-	100	79.251	Amphiprion_percula
ENSGAFG00000015819	-	97	78.261	ENSATEG00000007674	si:ch1073-335m2.2	99	79.070	Anabas_testudineus
ENSGAFG00000015819	-	88	96.648	ENSATEG00000005627	-	100	76.595	Anabas_testudineus
ENSGAFG00000015819	-	80	71.008	ENSAPLG00000012618	SPEN	100	46.405	Anas_platyrhynchos
ENSGAFG00000015819	-	81	66.406	ENSACAG00000013761	SPEN	100	43.507	Anolis_carolinensis
ENSGAFG00000015819	-	81	70.833	ENSANAG00000034428	SPEN	96	44.257	Aotus_nancymaae
ENSGAFG00000015819	-	88	94.382	ENSACLG00000016922	-	100	76.893	Astatotilapia_calliptera
ENSGAFG00000015819	-	95	79.651	ENSACLG00000021433	si:ch1073-335m2.2	99	83.432	Astatotilapia_calliptera
ENSGAFG00000015819	-	87	83.799	ENSAMXG00000012485	spen	100	54.100	Astyanax_mexicanus
ENSGAFG00000015819	-	91	73.408	ENSBTAG00000018729	SPEN	97	44.576	Bos_taurus
ENSGAFG00000015819	-	90	73.962	ENSCJAG00000008527	SPEN	96	44.313	Callithrix_jacchus
ENSGAFG00000015819	-	91	74.157	ENSCAFG00000016132	-	91	51.892	Canis_familiaris
ENSGAFG00000015819	-	91	74.157	ENSCHIG00000025070	SPEN	97	44.522	Capra_hircus
ENSGAFG00000015819	-	80	45.057	ENSTSYG00000036016	SPEN	96	42.806	Carlito_syrichta
ENSGAFG00000015819	-	80	72.083	ENSCAPG00000013803	SPEN	100	43.029	Cavia_aperea
ENSGAFG00000015819	-	80	71.967	ENSCPOG00000014036	SPEN	100	41.465	Cavia_porcellus
ENSGAFG00000015819	-	91	73.783	ENSCCAG00000020258	SPEN	96	41.152	Cebus_capucinus
ENSGAFG00000015819	-	83	86.667	ENSCATG00000015079	SPEN	96	44.227	Cercocebus_atys
ENSGAFG00000015819	-	80	71.967	ENSCLAG00000002018	SPEN	100	43.328	Chinchilla_lanigera
ENSGAFG00000015819	-	90	74.340	ENSCSAG00000000841	SPEN	96	44.317	Chlorocebus_sabaeus
ENSGAFG00000015819	-	91	73.783	ENSCPBG00000010477	SPEN	100	46.573	Chrysemys_picta_bellii
ENSGAFG00000015819	-	88	67.954	ENSCANG00000034547	SPEN	90	46.285	Colobus_angolensis_palliatus
ENSGAFG00000015819	-	90	75.094	ENSCGRG00001007725	Spen	97	45.328	Cricetulus_griseus_chok1gshd
ENSGAFG00000015819	-	71	71.905	ENSCGRG00000010581	Spen	97	43.885	Cricetulus_griseus_crigri
ENSGAFG00000015819	-	88	94.382	ENSCSEG00000003915	-	100	73.220	Cynoglossus_semilaevis
ENSGAFG00000015819	-	97	83.432	ENSCVAG00000009075	si:ch1073-335m2.2	99	83.432	Cyprinodon_variegatus
ENSGAFG00000015819	-	100	87.207	ENSCVAG00000016346	-	100	87.122	Cyprinodon_variegatus
ENSGAFG00000015819	-	90	67.093	ENSDARG00000074245	spen	100	91.852	Danio_rerio
ENSGAFG00000015819	-	76	69.058	ENSDARG00000074332	si:ch1073-335m2.2	100	46.114	Danio_rerio
ENSGAFG00000015819	-	91	74.532	ENSDNOG00000041948	SPEN	86	49.083	Dasypus_novemcinctus
ENSGAFG00000015819	-	81	70.833	ENSDORG00000023909	Spen	96	43.553	Dipodomys_ordii
ENSGAFG00000015819	-	80	70.886	ENSETEG00000016692	-	55	60.733	Echinops_telfairi
ENSGAFG00000015819	-	60	63.587	ENSEBUG00000005464	-	63	67.213	Eptatretus_burgeri
ENSGAFG00000015819	-	84	86.765	ENSEASG00005015911	SPEN	96	86.765	Equus_asinus_asinus
ENSGAFG00000015819	-	94	86.765	ENSECAG00000008833	SPEN	96	86.765	Equus_caballus
ENSGAFG00000015819	-	90	72.830	ENSEEUG00000010255	SPEN	59	88.095	Erinaceus_europaeus
ENSGAFG00000015819	-	98	79.688	ENSELUG00000007726	si:ch1073-335m2.2	99	82.222	Esox_lucius
ENSGAFG00000015819	-	78	71.368	ENSFDAG00000010212	SPEN	93	46.595	Fukomys_damarensis
ENSGAFG00000015819	-	90	96.109	ENSFHEG00000013136	-	92	95.192	Fundulus_heteroclitus
ENSGAFG00000015819	-	97	89.130	ENSGMOG00000008397	-	99	91.061	Gadus_morhua
ENSGAFG00000015819	-	93	74.242	ENSGMOG00000008156	si:ch1073-335m2.2	94	75.648	Gadus_morhua
ENSGAFG00000015819	-	91	73.783	ENSGALG00000036932	SPEN	99	47.102	Gallus_gallus
ENSGAFG00000015819	-	90	87.547	ENSGACG00000005341	-	100	71.441	Gasterosteus_aculeatus
ENSGAFG00000015819	-	91	70.270	ENSGACG00000001176	si:ch1073-335m2.2	97	79.651	Gasterosteus_aculeatus
ENSGAFG00000015819	-	91	73.783	ENSGAGG00000020785	SPEN	100	46.748	Gopherus_agassizii
ENSGAFG00000015819	-	90	74.340	ENSGGOG00000012041	SPEN	85	48.168	Gorilla_gorilla
ENSGAFG00000015819	-	95	79.651	ENSHBUG00000023253	si:ch1073-335m2.2	99	83.432	Haplochromis_burtoni
ENSGAFG00000015819	-	88	94.382	ENSHBUG00000020626	-	100	76.858	Haplochromis_burtoni
ENSGAFG00000015819	-	90	74.906	ENSHGLG00000019259	SPEN	83	56.052	Heterocephalus_glaber_female
ENSGAFG00000015819	-	78	70.940	ENSHGLG00100019294	SPEN	81	55.562	Heterocephalus_glaber_male
ENSGAFG00000015819	-	90	76.265	ENSHCOG00000002791	-	90	76.265	Hippocampus_comes
ENSGAFG00000015819	-	93	81.102	ENSHCOG00000006004	si:ch1073-335m2.2	99	81.102	Hippocampus_comes
ENSGAFG00000015819	-	95	60.079	ENSIPUG00000018212	si:ch1073-335m2.2	99	59.449	Ictalurus_punctatus
ENSGAFG00000015819	-	89	64.331	ENSIPUG00000021668	spen	100	51.929	Ictalurus_punctatus
ENSGAFG00000015819	-	78	70.690	ENSSTOG00000021428	SPEN	97	44.425	Ictidomys_tridecemlineatus
ENSGAFG00000015819	-	90	74.717	ENSJJAG00000010882	Spen	98	45.944	Jaculus_jaculus
ENSGAFG00000015819	-	88	94.944	ENSKMAG00000003882	-	100	79.961	Kryptolebias_marmoratus
ENSGAFG00000015819	-	90	83.203	ENSLBEG00000019151	-	88	84.722	Labrus_bergylta
ENSGAFG00000015819	-	97	82.249	ENSLBEG00000020855	si:ch1073-335m2.2	99	82.249	Labrus_bergylta
ENSGAFG00000015819	-	84	70.453	ENSLBEG00000019129	-	100	70.453	Labrus_bergylta
ENSGAFG00000015819	-	89	76.046	ENSLACG00000003258	SPEN	99	85.093	Latimeria_chalumnae
ENSGAFG00000015819	-	97	84.828	ENSLOCG00000007896	si:ch1073-335m2.2	97	84.828	Lepisosteus_oculatus
ENSGAFG00000015819	-	90	66.415	ENSLAFG00000004524	SPEN	97	43.430	Loxodonta_africana
ENSGAFG00000015819	-	90	74.340	ENSMFAG00000041974	SPEN	96	44.022	Macaca_fascicularis
ENSGAFG00000015819	-	90	74.340	ENSMMUG00000008026	SPEN	96	44.033	Macaca_mulatta
ENSGAFG00000015819	-	90	74.340	ENSMNEG00000042402	SPEN	90	48.090	Macaca_nemestrina
ENSGAFG00000015819	-	90	66.792	ENSMLEG00000039293	SPEN	96	43.565	Mandrillus_leucophaeus
ENSGAFG00000015819	-	97	83.832	ENSMAMG00000023870	si:ch1073-335m2.2	99	83.832	Mastacembelus_armatus
ENSGAFG00000015819	-	90	89.695	ENSMAMG00000014536	-	87	94.413	Mastacembelus_armatus
ENSGAFG00000015819	-	95	79.651	ENSMZEG00005011762	si:ch1073-335m2.2	99	83.432	Maylandia_zebra
ENSGAFG00000015819	-	89	74.984	ENSMZEG00005021491	-	99	74.953	Maylandia_zebra
ENSGAFG00000015819	-	91	73.783	ENSMGAG00000005180	-	85	89.683	Meleagris_gallopavo
ENSGAFG00000015819	-	90	74.717	ENSMAUG00000008318	Spen	90	47.379	Mesocricetus_auratus
ENSGAFG00000015819	-	90	73.962	ENSMICG00000030994	SPEN	96	45.014	Microcebus_murinus
ENSGAFG00000015819	-	91	74.532	ENSMOCG00000016083	Spen	97	43.713	Microtus_ochrogaster
ENSGAFG00000015819	-	95	74.737	ENSMMOG00000021742	si:ch1073-335m2.2	98	82.249	Mola_mola
ENSGAFG00000015819	-	90	92.578	ENSMMOG00000017059	-	90	92.578	Mola_mola
ENSGAFG00000015819	-	91	73.881	ENSMODG00000003411	SPEN	100	45.099	Monodelphis_domestica
ENSGAFG00000015819	-	86	95.506	ENSMALG00000008625	-	100	76.655	Monopterus_albus
ENSGAFG00000015819	-	91	74.157	MGP_CAROLIEiJ_G0026745	Spen	97	44.684	Mus_caroli
ENSGAFG00000015819	-	91	74.157	ENSMUSG00000040761	Spen	97	44.292	Mus_musculus
ENSGAFG00000015819	-	90	74.340	MGP_PahariEiJ_G0029076	Spen	97	44.272	Mus_pahari
ENSGAFG00000015819	-	91	74.157	MGP_SPRETEiJ_G0027724	Spen	97	44.706	Mus_spretus
ENSGAFG00000015819	-	88	46.669	ENSMPUG00000016317	SPEN	96	44.166	Mustela_putorius_furo
ENSGAFG00000015819	-	93	87.097	ENSMLUG00000010144	SPEN	93	87.097	Myotis_lucifugus
ENSGAFG00000015819	-	90	74.340	ENSNGAG00000000641	Spen	97	47.985	Nannospalax_galili
ENSGAFG00000015819	-	85	73.922	ENSNBRG00000022090	-	100	74.154	Neolamprologus_brichardi
ENSGAFG00000015819	-	95	80.233	ENSNBRG00000005733	si:ch1073-335m2.2	99	83.432	Neolamprologus_brichardi
ENSGAFG00000015819	-	81	71.250	ENSNLEG00000007652	SPEN	85	47.609	Nomascus_leucogenys
ENSGAFG00000015819	-	76	82.292	ENSMEUG00000002422	SPEN	91	82.292	Notamacropus_eugenii
ENSGAFG00000015819	-	80	71.730	ENSOPRG00000015800	SPEN	81	63.857	Ochotona_princeps
ENSGAFG00000015819	-	90	74.906	ENSODEG00000016644	SPEN	100	42.966	Octodon_degus
ENSGAFG00000015819	-	90	90.805	ENSONIG00000006573	-	99	87.205	Oreochromis_niloticus
ENSGAFG00000015819	-	80	69.748	ENSOANG00000004165	-	100	70.557	Ornithorhynchus_anatinus
ENSGAFG00000015819	-	90	60.300	ENSOCUG00000010840	SPEN	97	42.536	Oryctolagus_cuniculus
ENSGAFG00000015819	-	96	66.667	ENSORLG00000018414	si:ch1073-335m2.2	99	82.840	Oryzias_latipes
ENSGAFG00000015819	-	87	65.223	ENSORLG00000028894	-	100	65.255	Oryzias_latipes
ENSGAFG00000015819	-	96	66.667	ENSORLG00020009351	si:ch1073-335m2.2	99	82.840	Oryzias_latipes_hni
ENSGAFG00000015819	-	87	65.517	ENSORLG00020007735	-	100	65.517	Oryzias_latipes_hni
ENSGAFG00000015819	-	94	83.230	ENSORLG00015005537	si:ch1073-335m2.2	99	83.230	Oryzias_latipes_hsok
ENSGAFG00000015819	-	89	90.449	ENSORLG00015022085	-	100	67.625	Oryzias_latipes_hsok
ENSGAFG00000015819	-	100	67.155	ENSOMEG00000007639	-	100	66.986	Oryzias_melastigma
ENSGAFG00000015819	-	98	66.245	ENSOMEG00000004509	si:ch1073-335m2.2	99	81.765	Oryzias_melastigma
ENSGAFG00000015819	-	90	74.340	ENSOGAG00000025110	SPEN	96	44.390	Otolemur_garnettii
ENSGAFG00000015819	-	88	68.462	ENSOARG00000008477	SPEN	96	44.145	Ovis_aries
ENSGAFG00000015819	-	81	70.833	ENSPPAG00000035690	SPEN	85	47.938	Pan_paniscus
ENSGAFG00000015819	-	90	74.340	ENSPTRG00000000210	SPEN	85	48.086	Pan_troglodytes
ENSGAFG00000015819	-	90	74.340	ENSPANG00000006293	SPEN	96	43.534	Papio_anubis
ENSGAFG00000015819	-	97	100.000	ENSPKIG00000010492	si:ch1073-335m2.2	100	100.000	Paramormyrops_kingsleyae
ENSGAFG00000015819	-	89	81.853	ENSPKIG00000002617	SPEN	90	85.083	Paramormyrops_kingsleyae
ENSGAFG00000015819	-	81	70.833	ENSPSIG00000008026	SPEN	100	45.450	Pelodiscus_sinensis
ENSGAFG00000015819	-	89	66.160	ENSPEMG00000022997	Spen	97	44.268	Peromyscus_maniculatus_bairdii
ENSGAFG00000015819	-	99	97.222	ENSPFOG00000024806	-	99	90.604	Poecilia_formosa
ENSGAFG00000015819	-	100	99.649	ENSPLAG00000001398	-	100	99.699	Poecilia_latipinna
ENSGAFG00000015819	-	96	82.840	ENSPLAG00000016625	si:ch1073-335m2.2	98	82.840	Poecilia_latipinna
ENSGAFG00000015819	-	96	82.840	ENSPMEG00000002674	si:ch1073-335m2.2	96	82.840	Poecilia_mexicana
ENSGAFG00000015819	-	100	99.298	ENSPMEG00000006764	-	100	99.298	Poecilia_mexicana
ENSGAFG00000015819	-	97	82.840	ENSPREG00000005357	si:ch1073-335m2.2	99	82.840	Poecilia_reticulata
ENSGAFG00000015819	-	100	98.947	ENSPREG00000010399	-	100	98.947	Poecilia_reticulata
ENSGAFG00000015819	-	90	74.340	ENSPPYG00000001834	SPEN	85	48.243	Pongo_abelii
ENSGAFG00000015819	-	89	61.484	ENSPCAG00000009543	SPEN	88	60.424	Procavia_capensis
ENSGAFG00000015819	-	90	73.585	ENSPCOG00000021735	SPEN	96	43.596	Propithecus_coquereli
ENSGAFG00000015819	-	91	73.408	ENSPVAG00000013794	SPEN	72	62.543	Pteropus_vampyrus
ENSGAFG00000015819	-	88	94.382	ENSPNYG00000012379	-	100	76.914	Pundamilia_nyererei
ENSGAFG00000015819	-	95	79.651	ENSPNYG00000009042	si:ch1073-335m2.2	99	83.432	Pundamilia_nyererei
ENSGAFG00000015819	-	87	85.876	ENSPNAG00000020795	spen	87	79.771	Pygocentrus_nattereri
ENSGAFG00000015819	-	98	71.635	ENSPNAG00000011452	si:ch1073-335m2.2	99	78.889	Pygocentrus_nattereri
ENSGAFG00000015819	-	81	71.250	ENSRNOG00000033556	Spen	97	44.250	Rattus_norvegicus
ENSGAFG00000015819	-	89	67.939	ENSRBIG00000039654	SPEN	90	47.655	Rhinopithecus_bieti
ENSGAFG00000015819	-	81	71.250	ENSRROG00000035686	SPEN	90	47.679	Rhinopithecus_roxellana
ENSGAFG00000015819	-	81	71.250	ENSSBOG00000028770	SPEN	85	48.303	Saimiri_boliviensis_boliviensis
ENSGAFG00000015819	-	83	69.636	ENSSHAG00000004960	SPEN	99	70.517	Sarcophilus_harrisii
ENSGAFG00000015819	-	86	66.667	ENSSFOG00015007131	si:ch1073-335m2.2	100	53.462	Scleropages_formosus
ENSGAFG00000015819	-	89	70.861	ENSSFOG00015010267	si:ch1073-335m2.2	100	54.195	Scleropages_formosus
ENSGAFG00000015819	-	88	96.067	ENSSMAG00000008996	-	100	76.020	Scophthalmus_maximus
ENSGAFG00000015819	-	90	91.985	ENSSDUG00000003476	-	96	97.207	Seriola_dumerili
ENSGAFG00000015819	-	90	91.985	ENSSLDG00000012950	-	96	97.207	Seriola_lalandi_dorsalis
ENSGAFG00000015819	-	98	64.754	ENSSLDG00000023347	si:ch1073-335m2.2	98	83.432	Seriola_lalandi_dorsalis
ENSGAFG00000015819	-	87	43.566	ENSSPUG00000001866	-	100	43.362	Sphenodon_punctatus
ENSGAFG00000015819	-	90	93.774	ENSSPAG00000006014	-	90	93.774	Stegastes_partitus
ENSGAFG00000015819	-	97	84.024	ENSSPAG00000012454	si:ch1073-335m2.2	99	84.024	Stegastes_partitus
ENSGAFG00000015819	-	91	74.157	ENSSSCG00000034484	SPEN	84	48.470	Sus_scrofa
ENSGAFG00000015819	-	88	93.820	ENSTRUG00000024350	-	100	70.658	Takifugu_rubripes
ENSGAFG00000015819	-	62	61.569	ENSTRUG00000021008	si:ch1073-335m2.2	100	77.901	Takifugu_rubripes
ENSGAFG00000015819	-	96	85.436	ENSTNIG00000010907	-	100	85.550	Tetraodon_nigroviridis
ENSGAFG00000015819	-	99	62.109	ENSTNIG00000014666	si:ch1073-335m2.2	100	79.006	Tetraodon_nigroviridis
ENSGAFG00000015819	-	69	77.181	ENSTBEG00000003628	SPEN	68	81.421	Tupaia_belangeri
ENSGAFG00000015819	-	81	71.130	ENSTTRG00000015704	SPEN	70	81.421	Tursiops_truncatus
ENSGAFG00000015819	-	91	74.157	ENSUAMG00000009600	SPEN	96	45.029	Ursus_americanus
ENSGAFG00000015819	-	96	85.057	ENSUMAG00000021641	SPEN	96	44.021	Ursus_maritimus
ENSGAFG00000015819	-	91	100.000	ENSVVUG00000028951	SPEN	95	100.000	Vulpes_vulpes
ENSGAFG00000015819	-	90	72.348	ENSXETG00000023114	SPEN	100	41.802	Xenopus_tropicalis
ENSGAFG00000015819	-	97	74.872	ENSXCOG00000004516	si:ch1073-335m2.2	99	81.871	Xiphophorus_couchianus
ENSGAFG00000015819	-	97	74.619	ENSXMAG00000029887	si:ch1073-335m2.2	99	81.871	Xiphophorus_maculatus
ENSGAFG00000015819	-	100	97.336	ENSXMAG00000021384	-	100	97.336	Xiphophorus_maculatus