EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000015874 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4362 bases
Position: chrNHOQ01001472.1:186058-190419
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023501	MMR_HSR1	PF01926.23	6.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023748	-	1560	-	ENSGAFP00000023501	519 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015874's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015874's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000015874	-	99	39.060	ENSGAFG00000001852	-	86	42.222
ENSGAFG00000015874	-	92	38.493	ENSGAFG00000015999	-	84	39.651
ENSGAFG00000015874	-	99	46.869	ENSGAFG00000015917	-	92	44.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015874	-	58	42.675	ENSAPOG00000020108	-	68	47.660	Acanthochromis_polyacanthus
ENSGAFG00000015874	-	92	42.770	ENSAPOG00000017667	-	88	42.531	Acanthochromis_polyacanthus
ENSGAFG00000015874	-	57	47.157	ENSACIG00000022222	-	83	47.925	Amphilophus_citrinellus
ENSGAFG00000015874	-	52	59.410	ENSACIG00000006484	-	71	64.224	Amphilophus_citrinellus
ENSGAFG00000015874	-	52	48.897	ENSACIG00000016313	-	70	53.540	Amphilophus_citrinellus
ENSGAFG00000015874	-	96	42.969	ENSATEG00000011341	-	78	44.323	Anabas_testudineus
ENSGAFG00000015874	-	53	61.594	ENSATEG00000011837	-	77	64.961	Anabas_testudineus
ENSGAFG00000015874	-	51	35.581	ENSATEG00000017209	-	83	37.719	Anabas_testudineus
ENSGAFG00000015874	-	65	47.353	ENSATEG00000011635	-	73	72.414	Anabas_testudineus
ENSGAFG00000015874	-	81	50.922	ENSACLG00000005063	-	92	46.863	Astatotilapia_calliptera
ENSGAFG00000015874	-	57	56.610	ENSACLG00000005625	-	84	48.026	Astatotilapia_calliptera
ENSGAFG00000015874	-	50	35.556	ENSACLG00000001886	-	75	38.559	Astatotilapia_calliptera
ENSGAFG00000015874	-	54	39.362	ENSAMXG00000039994	-	76	43.049	Astyanax_mexicanus
ENSGAFG00000015874	-	64	44.643	ENSAMXG00000032276	-	55	51.282	Astyanax_mexicanus
ENSGAFG00000015874	-	70	39.295	ENSAMXG00000043838	-	55	52.444	Astyanax_mexicanus
ENSGAFG00000015874	-	50	48.718	ENSAMXG00000038580	-	91	48.718	Astyanax_mexicanus
ENSGAFG00000015874	-	50	61.240	ENSCVAG00000005487	-	70	63.136	Cyprinodon_variegatus
ENSGAFG00000015874	-	99	43.604	ENSCVAG00000018793	-	52	66.383	Cyprinodon_variegatus
ENSGAFG00000015874	-	98	47.592	ENSCVAG00000003593	-	77	49.790	Cyprinodon_variegatus
ENSGAFG00000015874	-	80	44.656	ENSCVAG00000023288	-	53	57.143	Cyprinodon_variegatus
ENSGAFG00000015874	-	53	76.923	ENSCVAG00000009387	-	83	76.923	Cyprinodon_variegatus
ENSGAFG00000015874	-	62	30.321	ENSDARG00000060049	zgc:195075	55	34.025	Danio_rerio
ENSGAFG00000015874	-	60	41.693	ENSDARG00000076573	si:dkey-88j15.3	77	47.863	Danio_rerio
ENSGAFG00000015874	-	50	40.230	ENSDARG00000052876	CR933791.2	62	43.182	Danio_rerio
ENSGAFG00000015874	-	61	38.924	ENSDARG00000087012	BX004816.2	56	43.673	Danio_rerio
ENSGAFG00000015874	-	61	52.160	ENSFHEG00000013922	-	62	58.079	Fundulus_heteroclitus
ENSGAFG00000015874	-	54	57.651	ENSHBUG00000000446	-	86	59.108	Haplochromis_burtoni
ENSGAFG00000015874	-	99	56.814	ENSHBUG00000011703	-	91	57.198	Haplochromis_burtoni
ENSGAFG00000015874	-	52	64.207	ENSHBUG00000016739	-	82	64.207	Haplochromis_burtoni
ENSGAFG00000015874	-	51	53.585	ENSHBUG00000007182	-	81	52.381	Haplochromis_burtoni
ENSGAFG00000015874	-	57	37.688	ENSIPUG00000009955	-	74	37.688	Ictalurus_punctatus
ENSGAFG00000015874	-	54	37.943	ENSIPUG00000007173	si:ch1073-185p12.2	56	41.284	Ictalurus_punctatus
ENSGAFG00000015874	-	68	40.563	ENSIPUG00000023842	-	60	47.863	Ictalurus_punctatus
ENSGAFG00000015874	-	69	37.813	ENSIPUG00000023837	-	59	54.018	Ictalurus_punctatus
ENSGAFG00000015874	-	50	38.806	ENSKMAG00000016762	-	93	44.175	Kryptolebias_marmoratus
ENSGAFG00000015874	-	52	37.324	ENSKMAG00000000074	-	95	36.620	Kryptolebias_marmoratus
ENSGAFG00000015874	-	52	33.452	ENSKMAG00000014047	-	61	36.199	Kryptolebias_marmoratus
ENSGAFG00000015874	-	59	55.844	ENSLBEG00000017941	-	65	62.128	Labrus_bergylta
ENSGAFG00000015874	-	97	50.389	ENSLBEG00000026359	-	91	50.487	Labrus_bergylta
ENSGAFG00000015874	-	60	53.205	ENSLBEG00000004167	-	82	56.485	Labrus_bergylta
ENSGAFG00000015874	-	75	46.667	ENSLBEG00000017905	-	83	66.667	Labrus_bergylta
ENSGAFG00000015874	-	50	53.110	ENSLOCG00000011761	-	75	52.444	Lepisosteus_oculatus
ENSGAFG00000015874	-	59	33.654	ENSMAMG00000020006	-	75	36.975	Mastacembelus_armatus
ENSGAFG00000015874	-	51	53.962	ENSMZEG00005016562	-	88	55.882	Maylandia_zebra
ENSGAFG00000015874	-	51	53.585	ENSMZEG00005020792	-	88	56.540	Maylandia_zebra
ENSGAFG00000015874	-	83	47.597	ENSMZEG00005014224	-	76	46.939	Maylandia_zebra
ENSGAFG00000015874	-	50	51.923	ENSMZEG00005001596	-	76	54.386	Maylandia_zebra
ENSGAFG00000015874	-	57	50.508	ENSMZEG00005027854	-	77	56.118	Maylandia_zebra
ENSGAFG00000015874	-	60	50.804	ENSMZEG00005021247	-	62	55.696	Maylandia_zebra
ENSGAFG00000015874	-	82	51.253	ENSMALG00000008656	-	70	51.370	Monopterus_albus
ENSGAFG00000015874	-	82	51.860	ENSNBRG00000003083	-	93	51.860	Neolamprologus_brichardi
ENSGAFG00000015874	-	60	55.280	ENSNBRG00000005951	-	70	63.265	Neolamprologus_brichardi
ENSGAFG00000015874	-	61	53.939	ENSNBRG00000023111	-	78	63.333	Neolamprologus_brichardi
ENSGAFG00000015874	-	51	54.340	ENSNBRG00000004025	-	86	58.590	Neolamprologus_brichardi
ENSGAFG00000015874	-	52	62.731	ENSONIG00000000243	-	88	68.844	Oreochromis_niloticus
ENSGAFG00000015874	-	55	55.594	ENSONIG00000000240	-	91	55.036	Oreochromis_niloticus
ENSGAFG00000015874	-	58	57.756	ENSONIG00000014258	-	72	64.103	Oreochromis_niloticus
ENSGAFG00000015874	-	50	37.500	ENSPKIG00000018002	-	59	38.912	Paramormyrops_kingsleyae
ENSGAFG00000015874	-	51	58.736	ENSPMGG00000024067	-	76	61.345	Periophthalmus_magnuspinnatus
ENSGAFG00000015874	-	63	66.341	ENSPFOG00000000432	-	88	65.766	Poecilia_formosa
ENSGAFG00000015874	-	54	58.596	ENSPFOG00000000263	-	66	64.255	Poecilia_formosa
ENSGAFG00000015874	-	61	50.949	ENSPLAG00000003471	-	62	58.974	Poecilia_latipinna
ENSGAFG00000015874	-	67	49.292	ENSPREG00000017071	-	68	58.723	Poecilia_reticulata
ENSGAFG00000015874	-	68	45.983	ENSPREG00000016816	-	52	56.780	Poecilia_reticulata
ENSGAFG00000015874	-	60	49.682	ENSPREG00000016801	-	74	56.846	Poecilia_reticulata
ENSGAFG00000015874	-	50	62.692	ENSPNYG00000023723	-	76	68.996	Pundamilia_nyererei
ENSGAFG00000015874	-	51	60.076	ENSPNYG00000004179	-	70	63.830	Pundamilia_nyererei
ENSGAFG00000015874	-	50	43.678	ENSPNAG00000008992	-	61	45.740	Pygocentrus_nattereri
ENSGAFG00000015874	-	56	41.034	ENSPNAG00000025964	-	52	48.792	Pygocentrus_nattereri
ENSGAFG00000015874	-	54	42.718	ENSPNAG00000025977	-	54	49.107	Pygocentrus_nattereri
ENSGAFG00000015874	-	50	43.678	ENSPNAG00000008987	-	55	45.740	Pygocentrus_nattereri
ENSGAFG00000015874	-	71	40.984	ENSPNAG00000026220	-	71	45.221	Pygocentrus_nattereri
ENSGAFG00000015874	-	56	43.289	ENSPNAG00000025944	-	55	49.776	Pygocentrus_nattereri
ENSGAFG00000015874	-	59	40.391	ENSPNAG00000014658	-	69	44.248	Pygocentrus_nattereri
ENSGAFG00000015874	-	68	40.443	ENSPNAG00000004032	-	54	49.327	Pygocentrus_nattereri
ENSGAFG00000015874	-	75	36.132	ENSSFOG00015015949	si:ch1073-185p12.2	52	42.081	Scleropages_formosus
ENSGAFG00000015874	-	86	42.152	ENSSMAG00000012958	-	57	56.540	Scophthalmus_maximus
ENSGAFG00000015874	-	51	49.645	ENSSDUG00000023613	-	83	48.214	Seriola_dumerili
ENSGAFG00000015874	-	51	42.322	ENSSLDG00000001623	-	86	43.515	Seriola_lalandi_dorsalis
ENSGAFG00000015874	-	53	57.040	ENSSLDG00000006746	-	94	60.870	Seriola_lalandi_dorsalis
ENSGAFG00000015874	-	56	47.119	ENSSLDG00000007061	-	78	51.754	Seriola_lalandi_dorsalis
ENSGAFG00000015874	-	60	57.097	ENSSPAG00000010369	-	73	59.160	Stegastes_partitus
ENSGAFG00000015874	-	55	58.681	ENSSPAG00000020154	-	75	60.305	Stegastes_partitus