EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000015911 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 16800 bases
Position: chrNHOQ01002476.1:557669-574468
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023574	PAZ	PF02170.22	1.2e-27	1	1
ENSGAFP00000023564	PAZ	PF02170.22	1.4e-27	1	1
ENSGAFP00000023564	Piwi	PF02171.17	8.2e-114	1	1
ENSGAFP00000023574	Piwi	PF02171.17	3.9e-95	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023811	-	2969	-	ENSGAFP00000023564	864 (aa)	-	-
ENSGAFT00000023822	-	2334	-	ENSGAFP00000023574	777 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015911's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015911's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000015911	-	100	80.778	ENSGAFG00000009775	ago1	100	80.778
ENSGAFG00000015911	-	99	78.454	ENSGAFG00000018026	ago2	97	78.454
ENSGAFG00000015911	-	99	78.385	ENSGAFG00000017239	ago4	99	78.385
ENSGAFG00000015911	-	100	94.118	ENSGAFG00000009808	ago3a	100	94.118

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015911	-	100	93.080	ENSG00000126070	AGO3	100	94.629	Homo_sapiens
ENSGAFG00000015911	-	100	96.078	ENSAPOG00000014494	-	100	96.078	Acanthochromis_polyacanthus
ENSGAFG00000015911	-	100	94.118	ENSAPOG00000024260	ago3a	100	94.118	Acanthochromis_polyacanthus
ENSGAFG00000015911	-	100	93.080	ENSAMEG00000000497	AGO3	100	93.080	Ailuropoda_melanoleuca
ENSGAFG00000015911	-	100	92.541	ENSACIG00000019272	AGO3	100	95.363	Amphilophus_citrinellus
ENSGAFG00000015911	-	100	92.162	ENSACIG00000005333	ago3a	100	94.987	Amphilophus_citrinellus
ENSGAFG00000015911	-	54	91.807	ENSAOCG00000022538	-	90	91.807	Amphiprion_ocellaris
ENSGAFG00000015911	-	100	84.576	ENSAOCG00000017051	-	100	87.562	Amphiprion_ocellaris
ENSGAFG00000015911	-	100	94.118	ENSAOCG00000017642	ago3a	100	94.118	Amphiprion_ocellaris
ENSGAFG00000015911	-	100	95.617	ENSAPEG00000020249	-	100	95.617	Amphiprion_percula
ENSGAFG00000015911	-	100	94.579	ENSAPEG00000004375	ago3a	100	94.579	Amphiprion_percula
ENSGAFG00000015911	-	100	94.579	ENSATEG00000008458	ago3a	100	94.579	Anabas_testudineus
ENSGAFG00000015911	-	100	95.732	ENSATEG00000005160	-	100	95.732	Anabas_testudineus
ENSGAFG00000015911	-	99	93.155	ENSAPLG00000009642	AGO3	99	93.155	Anas_platyrhynchos
ENSGAFG00000015911	-	99	93.148	ENSACAG00000003385	AGO3	99	93.148	Anolis_carolinensis
ENSGAFG00000015911	-	100	93.080	ENSANAG00000037735	AGO3	100	93.080	Aotus_nancymaae
ENSGAFG00000015911	-	100	94.118	ENSACLG00000000963	ago3a	100	94.118	Astatotilapia_calliptera
ENSGAFG00000015911	-	100	95.040	ENSACLG00000001965	-	100	95.040	Astatotilapia_calliptera
ENSGAFG00000015911	-	100	90.265	ENSAMXG00000009571	ago3b	100	93.108	Astyanax_mexicanus
ENSGAFG00000015911	-	100	92.021	ENSAMXG00000002198	ago3a	100	93.233	Astyanax_mexicanus
ENSGAFG00000015911	-	100	93.080	ENSBTAG00000018324	AGO3	100	93.080	Bos_taurus
ENSGAFG00000015911	-	100	93.080	ENSCJAG00000031580	AGO3	100	93.080	Callithrix_jacchus
ENSGAFG00000015911	-	100	92.964	ENSCAFG00000024682	AGO3	100	92.964	Canis_familiaris
ENSGAFG00000015911	-	99	93.326	ENSCAFG00020009051	AGO3	99	95.860	Canis_lupus_dingo
ENSGAFG00000015911	-	100	93.080	ENSCHIG00000011536	AGO3	100	93.080	Capra_hircus
ENSGAFG00000015911	-	84	94.343	ENSTSYG00000011897	AGO3	100	92.202	Carlito_syrichta
ENSGAFG00000015911	-	100	77.849	ENSCAPG00000011589	AGO3	99	77.849	Cavia_aperea
ENSGAFG00000015911	-	100	89.186	ENSCPOG00000030524	AGO3	99	89.895	Cavia_porcellus
ENSGAFG00000015911	-	100	93.080	ENSCCAG00000034189	AGO3	100	94.629	Cebus_capucinus
ENSGAFG00000015911	-	100	93.080	ENSCATG00000029748	AGO3	99	95.963	Cercocebus_atys
ENSGAFG00000015911	-	100	93.080	ENSCLAG00000013184	AGO3	100	93.080	Chinchilla_lanigera
ENSGAFG00000015911	-	100	93.080	ENSCSAG00000001092	AGO3	100	93.080	Chlorocebus_sabaeus
ENSGAFG00000015911	-	92	94.286	ENSCHOG00000011621	AGO3	92	94.286	Choloepus_hoffmanni
ENSGAFG00000015911	-	100	92.964	ENSCPBG00000018583	AGO3	99	94.037	Chrysemys_picta_bellii
ENSGAFG00000015911	-	100	93.080	ENSCANG00000033258	AGO3	99	95.963	Colobus_angolensis_palliatus
ENSGAFG00000015911	-	100	93.080	ENSCGRG00001024614	Ago3	100	93.080	Cricetulus_griseus_chok1gshd
ENSGAFG00000015911	-	100	93.080	ENSCGRG00000010670	Ago3	100	93.080	Cricetulus_griseus_crigri
ENSGAFG00000015911	-	100	92.035	ENSCSEG00000001040	ago3a	100	94.862	Cynoglossus_semilaevis
ENSGAFG00000015911	-	100	86.767	ENSCSEG00000009788	-	100	89.975	Cynoglossus_semilaevis
ENSGAFG00000015911	-	100	94.118	ENSCVAG00000018224	ago3a	100	94.118	Cyprinodon_variegatus
ENSGAFG00000015911	-	52	92.779	ENSCVAG00000011229	-	98	92.779	Cyprinodon_variegatus
ENSGAFG00000015911	-	100	94.579	ENSDARG00000059888	ago3a	100	94.579	Danio_rerio
ENSGAFG00000015911	-	100	93.772	ENSDARG00000063079	ago3b	100	93.772	Danio_rerio
ENSGAFG00000015911	-	88	92.549	ENSDNOG00000008106	AGO3	100	92.549	Dasypus_novemcinctus
ENSGAFG00000015911	-	100	93.171	ENSDORG00000009414	Ago3	100	93.171	Dipodomys_ordii
ENSGAFG00000015911	-	84	94.915	ENSETEG00000007639	AGO3	89	94.915	Echinops_telfairi
ENSGAFG00000015911	-	100	93.080	ENSEASG00005012089	AGO3	100	93.080	Equus_asinus_asinus
ENSGAFG00000015911	-	100	93.080	ENSECAG00000023972	AGO3	100	93.080	Equus_caballus
ENSGAFG00000015911	-	100	77.163	ENSEEUG00000007058	AGO3	100	77.163	Erinaceus_europaeus
ENSGAFG00000015911	-	100	93.394	ENSELUG00000001774	-	100	93.394	Esox_lucius
ENSGAFG00000015911	-	100	89.507	ENSELUG00000016755	ago3a	100	92.356	Esox_lucius
ENSGAFG00000015911	-	79	91.054	ENSFCAG00000000747	-	100	94.629	Felis_catus
ENSGAFG00000015911	-	99	93.039	ENSFALG00000000802	AGO3	99	93.039	Ficedula_albicollis
ENSGAFG00000015911	-	99	93.590	ENSFDAG00000012874	AGO3	99	93.590	Fukomys_damarensis
ENSGAFG00000015911	-	100	98.495	ENSFHEG00000016205	-	100	98.495	Fundulus_heteroclitus
ENSGAFG00000015911	-	100	93.047	ENSGMOG00000013069	-	100	95.724	Gadus_morhua
ENSGAFG00000015911	-	83	79.675	ENSGMOG00000019418	-	89	79.675	Gadus_morhua
ENSGAFG00000015911	-	100	92.964	ENSGALG00000043711	AGO3	100	92.964	Gallus_gallus
ENSGAFG00000015911	-	100	91.814	ENSGACG00000012453	ago3a	100	94.652	Gasterosteus_aculeatus
ENSGAFG00000015911	-	100	92.794	ENSGACG00000002455	AGO3	100	95.487	Gasterosteus_aculeatus
ENSGAFG00000015911	-	100	92.964	ENSGAGG00000012887	AGO3	100	92.964	Gopherus_agassizii
ENSGAFG00000015911	-	100	93.080	ENSGGOG00000036711	AGO3	100	93.080	Gorilla_gorilla
ENSGAFG00000015911	-	89	93.411	ENSHBUG00000010542	ago3a	97	93.411	Haplochromis_burtoni
ENSGAFG00000015911	-	100	95.156	ENSHBUG00000017794	-	100	95.156	Haplochromis_burtoni
ENSGAFG00000015911	-	100	93.080	ENSHGLG00000012538	AGO3	100	93.080	Heterocephalus_glaber_female
ENSGAFG00000015911	-	99	93.116	ENSHGLG00100006043	AGO3	100	93.116	Heterocephalus_glaber_male
ENSGAFG00000015911	-	87	92.553	ENSHCOG00000005674	ago3a	97	92.553	Hippocampus_comes
ENSGAFG00000015911	-	100	94.694	ENSHCOG00000011851	AGO3	100	94.694	Hippocampus_comes
ENSGAFG00000015911	-	100	94.464	ENSIPUG00000008548	ago3b	100	94.464	Ictalurus_punctatus
ENSGAFG00000015911	-	99	88.915	ENSIPUG00000023241	ago3a	99	89.171	Ictalurus_punctatus
ENSGAFG00000015911	-	100	88.697	ENSSTOG00000025904	AGO3	100	88.697	Ictidomys_tridecemlineatus
ENSGAFG00000015911	-	100	93.080	ENSJJAG00000017436	Ago3	100	93.080	Jaculus_jaculus
ENSGAFG00000015911	-	100	94.579	ENSKMAG00000019534	ago3a	100	94.579	Kryptolebias_marmoratus
ENSGAFG00000015911	-	100	92.288	ENSLBEG00000007592	ago3a	100	95.113	Labrus_bergylta
ENSGAFG00000015911	-	100	94.191	ENSLBEG00000016073	-	100	94.191	Labrus_bergylta
ENSGAFG00000015911	-	100	93.080	ENSLAFG00000002744	AGO3	100	93.080	Loxodonta_africana
ENSGAFG00000015911	-	100	93.080	ENSMFAG00000035610	AGO3	100	94.629	Macaca_fascicularis
ENSGAFG00000015911	-	100	93.080	ENSMMUG00000006252	AGO3	98	95.820	Macaca_mulatta
ENSGAFG00000015911	-	100	93.080	ENSMNEG00000039518	AGO3	100	94.629	Macaca_nemestrina
ENSGAFG00000015911	-	100	93.080	ENSMLEG00000027912	AGO3	100	94.629	Mandrillus_leucophaeus
ENSGAFG00000015911	-	100	91.783	ENSMAMG00000008440	ago3a	100	94.612	Mastacembelus_armatus
ENSGAFG00000015911	-	100	95.271	ENSMAMG00000005697	-	100	95.271	Mastacembelus_armatus
ENSGAFG00000015911	-	100	95.271	ENSMZEG00005026243	-	100	95.271	Maylandia_zebra
ENSGAFG00000015911	-	100	94.118	ENSMZEG00005007949	ago3a	100	94.118	Maylandia_zebra
ENSGAFG00000015911	-	99	93.155	ENSMGAG00000003773	AGO3	99	93.155	Meleagris_gallopavo
ENSGAFG00000015911	-	100	83.655	ENSMAUG00000010128	Ago3	96	83.784	Mesocricetus_auratus
ENSGAFG00000015911	-	100	93.080	ENSMICG00000016158	AGO3	100	93.080	Microcebus_murinus
ENSGAFG00000015911	-	99	90.909	ENSMOCG00000020568	Ago3	99	90.909	Microtus_ochrogaster
ENSGAFG00000015911	-	100	91.929	ENSMMOG00000018446	ago3a	100	91.929	Mola_mola
ENSGAFG00000015911	-	100	93.830	ENSMMOG00000014065	-	100	93.830	Mola_mola
ENSGAFG00000015911	-	100	92.849	ENSMODG00000017869	AGO3	100	92.849	Monodelphis_domestica
ENSGAFG00000015911	-	100	93.179	ENSMALG00000010895	ago3a	100	90.807	Monopterus_albus
ENSGAFG00000015911	-	99	92.640	ENSMALG00000014658	-	100	91.801	Monopterus_albus
ENSGAFG00000015911	-	100	92.849	MGP_CAROLIEiJ_G0026477	Ago3	100	92.849	Mus_caroli
ENSGAFG00000015911	-	100	92.734	ENSMUSG00000028842	Ago3	100	92.734	Mus_musculus
ENSGAFG00000015911	-	100	92.849	MGP_PahariEiJ_G0028808	Ago3	100	92.849	Mus_pahari
ENSGAFG00000015911	-	100	92.964	MGP_SPRETEiJ_G0027456	Ago3	100	92.964	Mus_spretus
ENSGAFG00000015911	-	79	90.895	ENSMLUG00000009668	AGO3	100	94.471	Myotis_lucifugus
ENSGAFG00000015911	-	100	93.080	ENSNGAG00000012607	Ago3	100	93.080	Nannospalax_galili
ENSGAFG00000015911	-	100	92.541	ENSNBRG00000015687	AGO3	100	95.363	Neolamprologus_brichardi
ENSGAFG00000015911	-	100	84.379	ENSNBRG00000010936	ago3a	100	85.910	Neolamprologus_brichardi
ENSGAFG00000015911	-	99	89.627	ENSNLEG00000027092	AGO3	99	89.627	Nomascus_leucogenys
ENSGAFG00000015911	-	86	91.429	ENSMEUG00000009200	AGO3	84	91.429	Notamacropus_eugenii
ENSGAFG00000015911	-	82	96.133	ENSOPRG00000012344	AGO3	82	96.133	Ochotona_princeps
ENSGAFG00000015911	-	99	93.590	ENSODEG00000005161	AGO3	99	93.590	Octodon_degus
ENSGAFG00000015911	-	100	95.386	ENSONIG00000013760	AGO3	100	95.386	Oreochromis_niloticus
ENSGAFG00000015911	-	100	94.002	ENSONIG00000016349	ago3a	100	94.002	Oreochromis_niloticus
ENSGAFG00000015911	-	98	93.779	ENSOANG00000002078	AGO3	99	93.779	Ornithorhynchus_anatinus
ENSGAFG00000015911	-	100	93.080	ENSOCUG00000006255	AGO3	100	93.080	Oryctolagus_cuniculus
ENSGAFG00000015911	-	100	92.541	ENSORLG00000015016	ago3a	100	95.363	Oryzias_latipes
ENSGAFG00000015911	-	100	92.964	ENSORLG00000009091	-	100	92.964	Oryzias_latipes
ENSGAFG00000015911	-	100	92.964	ENSORLG00020015386	AGO3	100	92.964	Oryzias_latipes_hni
ENSGAFG00000015911	-	100	92.964	ENSORLG00015006205	-	100	92.964	Oryzias_latipes_hsok
ENSGAFG00000015911	-	100	92.541	ENSORLG00015000087	ago3a	100	95.363	Oryzias_latipes_hsok
ENSGAFG00000015911	-	100	93.080	ENSOMEG00000022085	-	100	93.080	Oryzias_melastigma
ENSGAFG00000015911	-	100	92.415	ENSOMEG00000020588	ago3a	100	95.238	Oryzias_melastigma
ENSGAFG00000015911	-	100	93.080	ENSOGAG00000010290	AGO3	100	93.080	Otolemur_garnettii
ENSGAFG00000015911	-	100	93.080	ENSOARG00000019609	AGO3	100	93.080	Ovis_aries
ENSGAFG00000015911	-	100	93.080	ENSPPAG00000031959	AGO3	100	94.629	Pan_paniscus
ENSGAFG00000015911	-	100	93.080	ENSPPRG00000005934	AGO3	100	94.629	Panthera_pardus
ENSGAFG00000015911	-	99	93.590	ENSPTIG00000001029	AGO3	99	93.590	Panthera_tigris_altaica
ENSGAFG00000015911	-	100	93.080	ENSPTRG00000000529	AGO3	100	94.629	Pan_troglodytes
ENSGAFG00000015911	-	100	93.080	ENSPANG00000007682	AGO3	99	95.963	Papio_anubis
ENSGAFG00000015911	-	95	93.212	ENSPSIG00000007162	AGO3	99	93.212	Pelodiscus_sinensis
ENSGAFG00000015911	-	100	92.920	ENSPMGG00000013215	-	100	95.739	Periophthalmus_magnuspinnatus
ENSGAFG00000015911	-	100	92.766	ENSPMGG00000024101	ago3a	100	94.486	Periophthalmus_magnuspinnatus
ENSGAFG00000015911	-	100	87.980	ENSPEMG00000024271	-	100	88.966	Peromyscus_maniculatus_bairdii
ENSGAFG00000015911	-	100	92.849	ENSPCIG00000000198	AGO3	100	92.849	Phascolarctos_cinereus
ENSGAFG00000015911	-	99	98.030	ENSPFOG00000006684	-	99	98.030	Poecilia_formosa
ENSGAFG00000015911	-	100	90.841	ENSPLAG00000017432	-	100	93.657	Poecilia_latipinna
ENSGAFG00000015911	-	100	94.694	ENSPLAG00000002848	ago3a	100	94.694	Poecilia_latipinna
ENSGAFG00000015911	-	100	94.118	ENSPMEG00000001806	ago3a	100	94.118	Poecilia_mexicana
ENSGAFG00000015911	-	100	99.421	ENSPMEG00000004268	-	100	99.421	Poecilia_mexicana
ENSGAFG00000015911	-	100	94.579	ENSPREG00000006604	ago3a	100	94.579	Poecilia_reticulata
ENSGAFG00000015911	-	88	99.639	ENSPREG00000009084	-	99	99.639	Poecilia_reticulata
ENSGAFG00000015911	-	100	93.080	ENSPPYG00000001550	AGO3	100	93.080	Pongo_abelii
ENSGAFG00000015911	-	99	81.374	ENSPCAG00000010090	AGO3	99	81.374	Procavia_capensis
ENSGAFG00000015911	-	100	93.080	ENSPCOG00000028390	AGO3	98	95.963	Propithecus_coquereli
ENSGAFG00000015911	-	100	92.964	ENSPVAG00000005086	AGO3	100	92.964	Pteropus_vampyrus
ENSGAFG00000015911	-	100	94.464	ENSPNYG00000012510	ago3a	100	94.464	Pundamilia_nyererei
ENSGAFG00000015911	-	100	94.579	ENSPNYG00000004707	-	100	94.579	Pundamilia_nyererei
ENSGAFG00000015911	-	100	93.772	ENSPNAG00000008825	ago3b	100	93.772	Pygocentrus_nattereri
ENSGAFG00000015911	-	100	94.233	ENSPNAG00000008033	ago3a	100	94.233	Pygocentrus_nattereri
ENSGAFG00000015911	-	100	93.080	ENSRNOG00000034269	Ago3	100	93.080	Rattus_norvegicus
ENSGAFG00000015911	-	100	93.080	ENSRBIG00000043774	AGO3	100	93.080	Rhinopithecus_bieti
ENSGAFG00000015911	-	100	93.080	ENSRROG00000042180	AGO3	100	93.080	Rhinopithecus_roxellana
ENSGAFG00000015911	-	100	93.080	ENSSBOG00000029981	AGO3	100	94.236	Saimiri_boliviensis_boliviensis
ENSGAFG00000015911	-	100	89.633	ENSSFOG00015000162	ago3a	100	92.481	Scleropages_formosus
ENSGAFG00000015911	-	100	95.271	ENSSMAG00000001969	-	100	95.271	Scophthalmus_maximus
ENSGAFG00000015911	-	100	94.233	ENSSMAG00000002775	ago3a	100	94.507	Scophthalmus_maximus
ENSGAFG00000015911	-	100	94.118	ENSSDUG00000010918	ago3a	100	94.118	Seriola_dumerili
ENSGAFG00000015911	-	100	95.848	ENSSDUG00000008069	-	100	95.848	Seriola_dumerili
ENSGAFG00000015911	-	100	95.848	ENSSLDG00000006859	-	100	95.865	Seriola_lalandi_dorsalis
ENSGAFG00000015911	-	100	92.288	ENSSLDG00000000463	ago3a	100	95.113	Seriola_lalandi_dorsalis
ENSGAFG00000015911	-	100	77.624	ENSSARG00000011549	AGO3	100	77.624	Sorex_araneus
ENSGAFG00000015911	-	99	93.007	ENSSPUG00000000753	AGO3	99	93.007	Sphenodon_punctatus
ENSGAFG00000015911	-	100	94.579	ENSSPAG00000019104	ago3a	100	94.579	Stegastes_partitus
ENSGAFG00000015911	-	100	94.292	ENSSPAG00000015728	-	100	94.292	Stegastes_partitus
ENSGAFG00000015911	-	100	94.000	ENSSSCG00000003630	AGO3	100	94.236	Sus_scrofa
ENSGAFG00000015911	-	81	91.108	ENSTGUG00000014986	AGO3	100	94.599	Taeniopygia_guttata
ENSGAFG00000015911	-	100	94.566	ENSTRUG00000012737	-	100	94.566	Takifugu_rubripes
ENSGAFG00000015911	-	100	90.392	ENSTRUG00000005992	ago3a	100	93.233	Takifugu_rubripes
ENSGAFG00000015911	-	99	91.512	ENSTNIG00000002635	AGO3	98	91.512	Tetraodon_nigroviridis
ENSGAFG00000015911	-	90	96.341	ENSTBEG00000016565	AGO3	90	96.341	Tupaia_belangeri
ENSGAFG00000015911	-	91	94.949	ENSTTRG00000015092	AGO3	92	94.949	Tursiops_truncatus
ENSGAFG00000015911	-	100	92.477	ENSUAMG00000026574	AGO3	99	93.904	Ursus_americanus
ENSGAFG00000015911	-	99	91.725	ENSVPAG00000007631	AGO3	99	91.725	Vicugna_pacos
ENSGAFG00000015911	-	98	94.007	ENSVVUG00000000362	AGO3	99	94.007	Vulpes_vulpes
ENSGAFG00000015911	-	99	92.807	ENSXETG00000027042	ago3	99	92.807	Xenopus_tropicalis
ENSGAFG00000015911	-	87	92.722	ENSXCOG00000007676	ago3a	100	95.965	Xiphophorus_couchianus
ENSGAFG00000015911	-	95	94.233	ENSXCOG00000000902	-	99	98.952	Xiphophorus_couchianus
ENSGAFG00000015911	-	100	94.579	ENSXMAG00000007141	ago3a	100	94.579	Xiphophorus_maculatus
ENSGAFG00000015911	-	100	98.611	ENSXMAG00000027615	-	100	98.611	Xiphophorus_maculatus