EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000015995 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 10928 bases
Position: chrNHOQ01001755.1:673498-684425
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023702	RIO1	PF01163.22	0.00014	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000023950	-	969	-	ENSGAFP00000023702	322 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000015995's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000015995's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000015995	-	88	32.660	ENSGAFG00000021866	mapk12a	80	32.660
ENSGAFG00000015995	-	61	34.359	ENSGAFG00000013515	rps6ka4	50	34.536

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000015995	-	98	83.232	ENSCVAG00000010267	-	96	83.232	Cyprinodon_variegatus
ENSGAFG00000015995	-	76	89.879	ENSKMAG00000008845	-	81	89.879	Kryptolebias_marmoratus
ENSGAFG00000015995	-	100	85.498	ENSPFOG00000015723	-	90	85.498	Poecilia_formosa
ENSGAFG00000015995	-	98	85.538	ENSPLAG00000003942	-	92	85.538	Poecilia_latipinna
ENSGAFG00000015995	-	88	82.534	ENSPMEG00000019972	-	93	82.534	Poecilia_mexicana
ENSGAFG00000015995	-	98	86.520	ENSPREG00000018327	-	92	86.520	Poecilia_reticulata