EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016095 (Gene tree)
Gene ID: -
Gene Symbol: zc3hc1
Alias: zgc:154099
Full Name: zinc finger%2C C3HC-type containing 1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 5764 bases
Position: chrNHOQ01002341.1:147918-153681
Accession: ZDB-GENE-061013-94
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023864	zf-C3HC	PF07967.13	1.1e-33	1	1
ENSGAFP00000023864	Rsm1	PF08600.10	1.4e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024114	-	2763	-	ENSGAFP00000023864	496 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016095's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016095's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016095	zc3hc1	95	42.683	ENSG00000091732	ZC3HC1	95	43.396	Homo_sapiens
ENSGAFG00000016095	zc3hc1	100	79.000	ENSAPOG00000009078	zc3hc1	100	79.000	Acanthochromis_polyacanthus
ENSGAFG00000016095	zc3hc1	96	42.886	ENSAMEG00000005425	ZC3HC1	95	43.496	Ailuropoda_melanoleuca
ENSGAFG00000016095	zc3hc1	99	76.954	ENSACIG00000019513	zc3hc1	99	76.954	Amphilophus_citrinellus
ENSGAFG00000016095	zc3hc1	100	77.555	ENSAOCG00000024310	zc3hc1	100	77.555	Amphiprion_ocellaris
ENSGAFG00000016095	zc3hc1	100	77.154	ENSAPEG00000004907	zc3hc1	100	77.154	Amphiprion_percula
ENSGAFG00000016095	zc3hc1	86	76.690	ENSATEG00000016898	zc3hc1	89	76.690	Anabas_testudineus
ENSGAFG00000016095	zc3hc1	86	42.697	ENSAPLG00000003832	ZC3HC1	96	42.697	Anas_platyrhynchos
ENSGAFG00000016095	zc3hc1	97	41.667	ENSACAG00000001638	ZC3HC1	96	41.667	Anolis_carolinensis
ENSGAFG00000016095	zc3hc1	96	41.283	ENSANAG00000022213	ZC3HC1	95	41.870	Aotus_nancymaae
ENSGAFG00000016095	zc3hc1	91	77.655	ENSACLG00000025033	zc3hc1	98	77.655	Astatotilapia_calliptera
ENSGAFG00000016095	zc3hc1	97	48.760	ENSAMXG00000036792	zc3hc1	99	48.760	Astyanax_mexicanus
ENSGAFG00000016095	zc3hc1	96	43.373	ENSBTAG00000011247	ZC3HC1	96	43.952	Bos_taurus
ENSGAFG00000016095	zc3hc1	96	42.545	ENSCJAG00000010536	ZC3HC1	96	43.114	Callithrix_jacchus
ENSGAFG00000016095	zc3hc1	96	43.976	ENSCAFG00000031850	-	96	44.153	Canis_familiaris
ENSGAFG00000016095	zc3hc1	96	43.713	ENSCAFG00000001499	-	94	43.888	Canis_familiaris
ENSGAFG00000016095	zc3hc1	96	43.574	ENSCAFG00000029401	-	94	43.750	Canis_familiaris
ENSGAFG00000016095	zc3hc1	96	43.574	ENSCAFG00000028735	-	96	43.750	Canis_familiaris
ENSGAFG00000016095	zc3hc1	96	43.200	ENSCAFG00020023333	-	96	43.373	Canis_lupus_dingo
ENSGAFG00000016095	zc3hc1	96	43.775	ENSCAFG00020006829	-	96	43.952	Canis_lupus_dingo
ENSGAFG00000016095	zc3hc1	96	39.078	ENSCHIG00000014103	ZC3HC1	95	39.638	Capra_hircus
ENSGAFG00000016095	zc3hc1	95	41.582	ENSTSYG00000002843	ZC3HC1	95	42.159	Carlito_syrichta
ENSGAFG00000016095	zc3hc1	88	35.965	ENSCAPG00000016300	ZC3HC1	96	35.965	Cavia_aperea
ENSGAFG00000016095	zc3hc1	96	42.629	ENSCPOG00000014034	ZC3HC1	96	43.145	Cavia_porcellus
ENSGAFG00000016095	zc3hc1	95	31.762	ENSCCAG00000020384	ZC3HC1	98	38.655	Cebus_capucinus
ENSGAFG00000016095	zc3hc1	96	42.254	ENSCATG00000023130	ZC3HC1	96	42.828	Cercocebus_atys
ENSGAFG00000016095	zc3hc1	83	33.726	ENSCLAG00000008260	ZC3HC1	88	34.906	Chinchilla_lanigera
ENSGAFG00000016095	zc3hc1	74	39.687	ENSCSAG00000009881	ZC3HC1	97	40.420	Chlorocebus_sabaeus
ENSGAFG00000016095	zc3hc1	90	44.946	ENSCHOG00000011846	ZC3HC1	99	44.924	Choloepus_hoffmanni
ENSGAFG00000016095	zc3hc1	96	43.373	ENSCPBG00000017519	ZC3HC1	96	42.944	Chrysemys_picta_bellii
ENSGAFG00000016095	zc3hc1	96	42.455	ENSCANG00000029091	ZC3HC1	96	43.030	Colobus_angolensis_palliatus
ENSGAFG00000016095	zc3hc1	96	43.232	ENSCGRG00001018805	Zc3hc1	95	45.482	Cricetulus_griseus_chok1gshd
ENSGAFG00000016095	zc3hc1	96	42.626	ENSCGRG00000017114	Zc3hc1	96	42.626	Cricetulus_griseus_crigri
ENSGAFG00000016095	zc3hc1	99	67.265	ENSCSEG00000009284	zc3hc1	98	67.665	Cynoglossus_semilaevis
ENSGAFG00000016095	zc3hc1	100	85.887	ENSCVAG00000011566	zc3hc1	99	85.887	Cyprinodon_variegatus
ENSGAFG00000016095	zc3hc1	99	57.460	ENSDARG00000062651	zc3hc1	99	57.460	Danio_rerio
ENSGAFG00000016095	zc3hc1	95	43.061	ENSDNOG00000045016	ZC3HC1	95	43.265	Dasypus_novemcinctus
ENSGAFG00000016095	zc3hc1	96	40.688	ENSDORG00000008697	Zc3hc1	95	40.650	Dipodomys_ordii
ENSGAFG00000016095	zc3hc1	89	44.252	ENSEASG00005008789	ZC3HC1	95	45.870	Equus_asinus_asinus
ENSGAFG00000016095	zc3hc1	96	43.086	ENSECAG00000017886	ZC3HC1	96	43.662	Equus_caballus
ENSGAFG00000016095	zc3hc1	65	47.647	ENSEEUG00000003123	ZC3HC1	66	47.059	Erinaceus_europaeus
ENSGAFG00000016095	zc3hc1	99	57.843	ENSELUG00000023168	zc3hc1	100	58.398	Esox_lucius
ENSGAFG00000016095	zc3hc1	96	42.857	ENSFCAG00000010429	ZC3HC1	95	45.058	Felis_catus
ENSGAFG00000016095	zc3hc1	87	41.886	ENSFALG00000005006	ZC3HC1	95	41.886	Ficedula_albicollis
ENSGAFG00000016095	zc3hc1	96	41.235	ENSFDAG00000019897	ZC3HC1	95	43.895	Fukomys_damarensis
ENSGAFG00000016095	zc3hc1	100	88.105	ENSFHEG00000020149	zc3hc1	100	88.105	Fundulus_heteroclitus
ENSGAFG00000016095	zc3hc1	98	62.090	ENSGMOG00000002914	zc3hc1	99	62.090	Gadus_morhua
ENSGAFG00000016095	zc3hc1	94	39.554	ENSGALG00000008003	ZC3HC1	95	39.757	Gallus_gallus
ENSGAFG00000016095	zc3hc1	99	71.573	ENSGACG00000019706	zc3hc1	99	71.573	Gasterosteus_aculeatus
ENSGAFG00000016095	zc3hc1	78	42.506	ENSGAGG00000016106	ZC3HC1	100	43.735	Gopherus_agassizii
ENSGAFG00000016095	zc3hc1	95	42.886	ENSGGOG00000015504	ZC3HC1	95	43.606	Gorilla_gorilla
ENSGAFG00000016095	zc3hc1	99	76.210	ENSHBUG00000008347	zc3hc1	99	76.210	Haplochromis_burtoni
ENSGAFG00000016095	zc3hc1	96	42.857	ENSHGLG00000005085	ZC3HC1	95	46.224	Heterocephalus_glaber_female
ENSGAFG00000016095	zc3hc1	95	42.974	ENSHGLG00100011395	ZC3HC1	93	46.224	Heterocephalus_glaber_male
ENSGAFG00000016095	zc3hc1	100	64.930	ENSHCOG00000014309	zc3hc1	100	65.200	Hippocampus_comes
ENSGAFG00000016095	zc3hc1	96	41.650	ENSSTOG00000023599	-	96	42.222	Ictidomys_tridecemlineatus
ENSGAFG00000016095	zc3hc1	99	76.970	ENSKMAG00000015315	zc3hc1	92	76.970	Kryptolebias_marmoratus
ENSGAFG00000016095	zc3hc1	99	68.064	ENSLBEG00000017325	zc3hc1	99	68.064	Labrus_bergylta
ENSGAFG00000016095	zc3hc1	76	42.822	ENSLACG00000013032	ZC3HC1	93	42.822	Latimeria_chalumnae
ENSGAFG00000016095	zc3hc1	97	52.834	ENSLOCG00000015963	zc3hc1	97	52.632	Lepisosteus_oculatus
ENSGAFG00000016095	zc3hc1	96	42.430	ENSLAFG00000001292	ZC3HC1	96	43.000	Loxodonta_africana
ENSGAFG00000016095	zc3hc1	96	42.455	ENSMFAG00000030176	ZC3HC1	96	43.030	Macaca_fascicularis
ENSGAFG00000016095	zc3hc1	96	41.767	ENSMMUG00000006155	ZC3HC1	95	43.913	Macaca_mulatta
ENSGAFG00000016095	zc3hc1	96	42.455	ENSMNEG00000011833	ZC3HC1	96	43.030	Macaca_nemestrina
ENSGAFG00000016095	zc3hc1	96	42.455	ENSMLEG00000027328	ZC3HC1	96	43.030	Mandrillus_leucophaeus
ENSGAFG00000016095	zc3hc1	99	76.305	ENSMAMG00000010691	zc3hc1	99	76.305	Mastacembelus_armatus
ENSGAFG00000016095	zc3hc1	99	76.411	ENSMZEG00005007142	zc3hc1	99	76.411	Maylandia_zebra
ENSGAFG00000016095	zc3hc1	94	37.376	ENSMGAG00000002977	ZC3HC1	95	39.000	Meleagris_gallopavo
ENSGAFG00000016095	zc3hc1	83	40.749	ENSMAUG00000017032	Zc3hc1	92	41.218	Mesocricetus_auratus
ENSGAFG00000016095	zc3hc1	96	41.948	ENSMICG00000009167	ZC3HC1	95	44.058	Microcebus_murinus
ENSGAFG00000016095	zc3hc1	96	43.952	ENSMOCG00000015239	Zc3hc1	95	47.147	Microtus_ochrogaster
ENSGAFG00000016095	zc3hc1	88	74.603	ENSMMOG00000002204	zc3hc1	99	74.603	Mola_mola
ENSGAFG00000016095	zc3hc1	98	33.461	ENSMODG00000014630	ZC3HC1	97	33.589	Monodelphis_domestica
ENSGAFG00000016095	zc3hc1	98	72.857	ENSMALG00000014447	zc3hc1	99	73.239	Monopterus_albus
ENSGAFG00000016095	zc3hc1	96	43.863	MGP_CAROLIEiJ_G0028183	Zc3hc1	95	45.619	Mus_caroli
ENSGAFG00000016095	zc3hc1	96	42.914	ENSMUSG00000039130	Zc3hc1	96	43.287	Mus_musculus
ENSGAFG00000016095	zc3hc1	96	40.400	MGP_PahariEiJ_G0021941	Zc3hc1	95	41.867	Mus_pahari
ENSGAFG00000016095	zc3hc1	96	42.914	MGP_SPRETEiJ_G0029183	Zc3hc1	96	43.287	Mus_spretus
ENSGAFG00000016095	zc3hc1	90	43.162	ENSMPUG00000005297	ZC3HC1	89	43.777	Mustela_putorius_furo
ENSGAFG00000016095	zc3hc1	67	38.418	ENSMLUG00000029228	-	98	38.352	Myotis_lucifugus
ENSGAFG00000016095	zc3hc1	96	43.713	ENSMLUG00000000063	-	96	43.687	Myotis_lucifugus
ENSGAFG00000016095	zc3hc1	96	43.461	ENSNGAG00000019014	Zc3hc1	96	43.636	Nannospalax_galili
ENSGAFG00000016095	zc3hc1	99	76.411	ENSNBRG00000004577	zc3hc1	99	76.411	Neolamprologus_brichardi
ENSGAFG00000016095	zc3hc1	94	42.300	ENSNLEG00000012698	ZC3HC1	94	42.887	Nomascus_leucogenys
ENSGAFG00000016095	zc3hc1	96	42.828	ENSMEUG00000011023	ZC3HC1	96	42.799	Notamacropus_eugenii
ENSGAFG00000016095	zc3hc1	96	40.519	ENSODEG00000014604	ZC3HC1	95	43.675	Octodon_degus
ENSGAFG00000016095	zc3hc1	99	76.210	ENSONIG00000011644	zc3hc1	99	76.210	Oreochromis_niloticus
ENSGAFG00000016095	zc3hc1	89	38.925	ENSOANG00000011460	ZC3HC1	97	39.309	Ornithorhynchus_anatinus
ENSGAFG00000016095	zc3hc1	96	42.914	ENSOCUG00000017137	ZC3HC1	96	43.487	Oryctolagus_cuniculus
ENSGAFG00000016095	zc3hc1	99	71.690	ENSORLG00000014409	zc3hc1	98	71.919	Oryzias_latipes
ENSGAFG00000016095	zc3hc1	99	72.098	ENSORLG00020015874	zc3hc1	98	72.323	Oryzias_latipes_hni
ENSGAFG00000016095	zc3hc1	99	72.301	ENSORLG00015014641	zc3hc1	98	72.323	Oryzias_latipes_hsok
ENSGAFG00000016095	zc3hc1	99	72.301	ENSOMEG00000020604	zc3hc1	99	72.525	Oryzias_melastigma
ENSGAFG00000016095	zc3hc1	99	72.098	ENSOMEG00000000215	zc3hc1	99	72.323	Oryzias_melastigma
ENSGAFG00000016095	zc3hc1	96	37.751	ENSOGAG00000026193	ZC3HC1	96	39.113	Otolemur_garnettii
ENSGAFG00000016095	zc3hc1	96	42.715	ENSOARG00000004907	ZC3HC1	94	43.287	Ovis_aries
ENSGAFG00000016095	zc3hc1	95	42.683	ENSPPAG00000043172	ZC3HC1	95	43.396	Pan_paniscus
ENSGAFG00000016095	zc3hc1	95	42.480	ENSPPRG00000001004	ZC3HC1	94	44.767	Panthera_pardus
ENSGAFG00000016095	zc3hc1	96	42.857	ENSPTIG00000007823	ZC3HC1	95	45.058	Panthera_tigris_altaica
ENSGAFG00000016095	zc3hc1	95	42.480	ENSPTRG00000019685	ZC3HC1	95	43.606	Pan_troglodytes
ENSGAFG00000016095	zc3hc1	96	41.767	ENSPANG00000014229	ZC3HC1	95	43.913	Papio_anubis
ENSGAFG00000016095	zc3hc1	99	51.081	ENSPKIG00000007172	zc3hc1	99	51.081	Paramormyrops_kingsleyae
ENSGAFG00000016095	zc3hc1	88	42.576	ENSPSIG00000016646	ZC3HC1	87	42.174	Pelodiscus_sinensis
ENSGAFG00000016095	zc3hc1	96	65.281	ENSPMGG00000003548	zc3hc1	95	65.696	Periophthalmus_magnuspinnatus
ENSGAFG00000016095	zc3hc1	96	42.105	ENSPEMG00000000514	Zc3hc1	95	45.345	Peromyscus_maniculatus_bairdii
ENSGAFG00000016095	zc3hc1	96	41.212	ENSPCIG00000020619	ZC3HC1	100	42.647	Phascolarctos_cinereus
ENSGAFG00000016095	zc3hc1	100	95.968	ENSPFOG00000003466	zc3hc1	100	95.968	Poecilia_formosa
ENSGAFG00000016095	zc3hc1	100	95.968	ENSPLAG00000022211	zc3hc1	100	95.968	Poecilia_latipinna
ENSGAFG00000016095	zc3hc1	100	95.968	ENSPMEG00000001458	zc3hc1	100	95.968	Poecilia_mexicana
ENSGAFG00000016095	zc3hc1	100	96.169	ENSPREG00000004004	zc3hc1	100	96.169	Poecilia_reticulata
ENSGAFG00000016095	zc3hc1	95	38.856	ENSPPYG00000017998	ZC3HC1	95	39.406	Pongo_abelii
ENSGAFG00000016095	zc3hc1	88	43.612	ENSPCAG00000001182	ZC3HC1	95	44.248	Procavia_capensis
ENSGAFG00000016095	zc3hc1	96	42.771	ENSPCOG00000017354	ZC3HC1	95	44.638	Propithecus_coquereli
ENSGAFG00000016095	zc3hc1	95	41.068	ENSPVAG00000003195	ZC3HC1	95	41.273	Pteropus_vampyrus
ENSGAFG00000016095	zc3hc1	99	76.411	ENSPNYG00000020692	zc3hc1	99	76.411	Pundamilia_nyererei
ENSGAFG00000016095	zc3hc1	98	48.780	ENSPNAG00000020746	zc3hc1	100	48.780	Pygocentrus_nattereri
ENSGAFG00000016095	zc3hc1	96	41.884	ENSRNOG00000010154	Zc3hc1	96	42.084	Rattus_norvegicus
ENSGAFG00000016095	zc3hc1	89	43.818	ENSRBIG00000029409	ZC3HC1	98	46.429	Rhinopithecus_bieti
ENSGAFG00000016095	zc3hc1	96	42.254	ENSRROG00000041831	ZC3HC1	95	43.895	Rhinopithecus_roxellana
ENSGAFG00000016095	zc3hc1	81	48.246	ENSSBOG00000032787	ZC3HC1	94	48.246	Saimiri_boliviensis_boliviensis
ENSGAFG00000016095	zc3hc1	88	43.392	ENSSHAG00000002529	ZC3HC1	94	43.392	Sarcophilus_harrisii
ENSGAFG00000016095	zc3hc1	97	53.307	ENSSFOG00015003667	zc3hc1	93	53.307	Scleropages_formosus
ENSGAFG00000016095	zc3hc1	99	73.896	ENSSMAG00000000647	zc3hc1	90	74.297	Scophthalmus_maximus
ENSGAFG00000016095	zc3hc1	99	76.815	ENSSDUG00000004241	zc3hc1	97	76.815	Seriola_dumerili
ENSGAFG00000016095	zc3hc1	99	77.621	ENSSLDG00000025056	zc3hc1	97	77.621	Seriola_lalandi_dorsalis
ENSGAFG00000016095	zc3hc1	96	39.235	ENSSARG00000012013	ZC3HC1	96	39.798	Sorex_araneus
ENSGAFG00000016095	zc3hc1	83	37.500	ENSSPUG00000000778	ZC3HC1	82	37.678	Sphenodon_punctatus
ENSGAFG00000016095	zc3hc1	100	80.600	ENSSPAG00000020041	zc3hc1	100	80.600	Stegastes_partitus
ENSGAFG00000016095	zc3hc1	96	42.626	ENSSSCG00000016565	ZC3HC1	100	42.574	Sus_scrofa
ENSGAFG00000016095	zc3hc1	100	65.400	ENSTRUG00000020077	zc3hc1	100	65.400	Takifugu_rubripes
ENSGAFG00000016095	zc3hc1	99	65.010	ENSTNIG00000007585	zc3hc1	99	65.895	Tetraodon_nigroviridis
ENSGAFG00000016095	zc3hc1	95	35.772	ENSTBEG00000005216	ZC3HC1	95	36.122	Tupaia_belangeri
ENSGAFG00000016095	zc3hc1	95	44.016	ENSTTRG00000008458	ZC3HC1	99	43.992	Tursiops_truncatus
ENSGAFG00000016095	zc3hc1	96	43.173	ENSUAMG00000020249	ZC3HC1	96	43.750	Ursus_americanus
ENSGAFG00000016095	zc3hc1	96	43.173	ENSUMAG00000009268	ZC3HC1	96	43.750	Ursus_maritimus
ENSGAFG00000016095	zc3hc1	63	40.810	ENSVPAG00000010846	ZC3HC1	61	41.745	Vicugna_pacos
ENSGAFG00000016095	zc3hc1	90	44.017	ENSVVUG00000012386	ZC3HC1	94	44.206	Vulpes_vulpes
ENSGAFG00000016095	zc3hc1	89	39.565	ENSXETG00000033900	zc3hc1	92	39.565	Xenopus_tropicalis
ENSGAFG00000016095	zc3hc1	100	93.750	ENSXCOG00000013570	zc3hc1	100	93.750	Xiphophorus_couchianus
ENSGAFG00000016095	zc3hc1	91	97.124	ENSXMAG00000010979	zc3hc1	98	97.124	Xiphophorus_maculatus