EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016162 (Gene tree)
Gene ID: -
Gene Symbol: safb
Alias: wu:fb40a03|wu:fd42g06|zgc:55387
Full Name: scaffold attachment factor B
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 9932 bases
Position: chrNHOQ01001926.1:2516279-2526210
Accession: ZDB-GENE-030131-698
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000023974	RRM_1	PF00076.22	3.4e-11	1	1
ENSGAFP00000023974	SAP	PF02037.27	9.8e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024223	-	3716	-	ENSGAFP00000023974	779 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016162's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016162's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016162	safb	67	39.267	ENSG00000160633	SAFB	76	61.719	Homo_sapiens
ENSGAFG00000016162	safb	100	66.280	ENSAPOG00000022508	safb	100	66.628	Acanthochromis_polyacanthus
ENSGAFG00000016162	safb	100	64.927	ENSACIG00000006247	safb	100	66.426	Amphilophus_citrinellus
ENSGAFG00000016162	safb	100	63.496	ENSAOCG00000006308	safb	100	65.133	Amphiprion_ocellaris
ENSGAFG00000016162	safb	100	66.435	ENSAPEG00000023342	safb	100	66.667	Amphiprion_percula
ENSGAFG00000016162	safb	100	64.983	ENSATEG00000004998	safb	100	65.593	Anabas_testudineus
ENSGAFG00000016162	safb	61	37.248	ENSAPLG00000005780	-	97	40.787	Anas_platyrhynchos
ENSGAFG00000016162	safb	67	39.580	ENSANAG00000028821	SAFB	94	38.048	Aotus_nancymaae
ENSGAFG00000016162	safb	100	67.672	ENSACLG00000001926	safb	100	68.154	Astatotilapia_calliptera
ENSGAFG00000016162	safb	97	54.057	ENSAMXG00000018154	safb	99	54.402	Astyanax_mexicanus
ENSGAFG00000016162	safb	98	40.785	ENSBTAG00000007875	SAFB	95	37.541	Bos_taurus
ENSGAFG00000016162	safb	52	53.462	ENSCJAG00000017081	SAFB	93	45.331	Callithrix_jacchus
ENSGAFG00000016162	safb	98	39.893	ENSCHIG00000007262	SAFB	95	38.022	Capra_hircus
ENSGAFG00000016162	safb	53	42.515	ENSTSYG00000001851	-	88	42.268	Carlito_syrichta
ENSGAFG00000016162	safb	67	39.580	ENSCCAG00000020193	SAFB	94	38.386	Cebus_capucinus
ENSGAFG00000016162	safb	67	39.931	ENSCATG00000029994	SAFB	94	38.403	Cercocebus_atys
ENSGAFG00000016162	safb	67	38.975	ENSCSAG00000009949	SAFB	94	38.403	Chlorocebus_sabaeus
ENSGAFG00000016162	safb	72	46.742	ENSCPBG00000010936	-	77	48.472	Chrysemys_picta_bellii
ENSGAFG00000016162	safb	90	40.345	ENSCPBG00000010928	-	92	42.911	Chrysemys_picta_bellii
ENSGAFG00000016162	safb	95	35.183	ENSCANG00000004774	-	92	39.572	Colobus_angolensis_palliatus
ENSGAFG00000016162	safb	94	39.290	ENSCANG00000019754	-	93	36.877	Colobus_angolensis_palliatus
ENSGAFG00000016162	safb	99	62.189	ENSCSEG00000019870	safb	100	61.805	Cynoglossus_semilaevis
ENSGAFG00000016162	safb	100	80.255	ENSCVAG00000002226	safb	100	80.255	Cyprinodon_variegatus
ENSGAFG00000016162	safb	97	53.917	ENSDARG00000020467	safb	99	53.691	Danio_rerio
ENSGAFG00000016162	safb	62	37.759	ENSDNOG00000015746	SAFB	95	36.123	Dasypus_novemcinctus
ENSGAFG00000016162	safb	65	36.170	ENSEASG00005023019	SAFB	97	38.972	Equus_asinus_asinus
ENSGAFG00000016162	safb	99	55.946	ENSELUG00000022327	safb	99	55.631	Esox_lucius
ENSGAFG00000016162	safb	67	38.354	ENSFCAG00000011835	SAFB	94	37.418	Felis_catus
ENSGAFG00000016162	safb	65	39.286	ENSFALG00000013882	-	87	41.522	Ficedula_albicollis
ENSGAFG00000016162	safb	100	84.304	ENSFHEG00000004219	safb	100	84.304	Fundulus_heteroclitus
ENSGAFG00000016162	safb	82	59.751	ENSGMOG00000014280	safb	90	61.379	Gadus_morhua
ENSGAFG00000016162	safb	67	39.750	ENSGALG00000013365	-	96	41.586	Gallus_gallus
ENSGAFG00000016162	safb	58	49.383	ENSGALG00000001948	-	83	49.002	Gallus_gallus
ENSGAFG00000016162	safb	100	60.992	ENSGACG00000011385	safb	100	61.802	Gasterosteus_aculeatus
ENSGAFG00000016162	safb	67	49.338	ENSGAGG00000017702	-	88	50.345	Gopherus_agassizii
ENSGAFG00000016162	safb	95	45.505	ENSGAGG00000008424	-	97	46.060	Gopherus_agassizii
ENSGAFG00000016162	safb	67	39.442	ENSGGOG00000015109	SAFB	94	38.368	Gorilla_gorilla
ENSGAFG00000016162	safb	100	63.835	ENSHBUG00000009218	safb	100	63.471	Haplochromis_burtoni
ENSGAFG00000016162	safb	94	58.260	ENSHCOG00000001705	safb	99	58.764	Hippocampus_comes
ENSGAFG00000016162	safb	100	53.531	ENSIPUG00000024869	safb2	100	54.732	Ictalurus_punctatus
ENSGAFG00000016162	safb	100	69.294	ENSKMAG00000022308	safb	100	69.729	Kryptolebias_marmoratus
ENSGAFG00000016162	safb	100	64.692	ENSLBEG00000006015	safb	100	64.692	Labrus_bergylta
ENSGAFG00000016162	safb	66	38.818	ENSLACG00000018090	SAFB	97	45.554	Latimeria_chalumnae
ENSGAFG00000016162	safb	99	51.293	ENSLOCG00000003613	safb	99	53.777	Lepisosteus_oculatus
ENSGAFG00000016162	safb	95	38.486	ENSLAFG00000003840	SAFB	95	37.527	Loxodonta_africana
ENSGAFG00000016162	safb	67	39.931	ENSMFAG00000003885	SAFB	94	38.537	Macaca_fascicularis
ENSGAFG00000016162	safb	95	40.749	ENSMMUG00000017970	SAFB	94	38.589	Macaca_mulatta
ENSGAFG00000016162	safb	67	37.500	ENSMNEG00000035637	SAFB	94	37.939	Macaca_nemestrina
ENSGAFG00000016162	safb	62	37.688	ENSMLEG00000038637	SAFB	94	37.061	Mandrillus_leucophaeus
ENSGAFG00000016162	safb	100	64.713	ENSMAMG00000003357	safb	91	64.713	Mastacembelus_armatus
ENSGAFG00000016162	safb	100	67.793	ENSMZEG00005009120	safb	100	68.275	Maylandia_zebra
ENSGAFG00000016162	safb	66	42.563	ENSMGAG00000001101	-	97	39.978	Meleagris_gallopavo
ENSGAFG00000016162	safb	58	50.000	ENSMGAG00000001051	-	82	51.493	Meleagris_gallopavo
ENSGAFG00000016162	safb	86	34.893	ENSMICG00000046795	-	93	35.094	Microcebus_murinus
ENSGAFG00000016162	safb	67	40.734	ENSMICG00000008739	-	94	38.749	Microcebus_murinus
ENSGAFG00000016162	safb	94	39.978	ENSMODG00000001236	SAFB	93	38.530	Monodelphis_domestica
ENSGAFG00000016162	safb	100	65.114	ENSMALG00000020330	safb	100	65.000	Monopterus_albus
ENSGAFG00000016162	safb	98	39.677	ENSMLUG00000001081	SAFB	94	37.336	Myotis_lucifugus
ENSGAFG00000016162	safb	94	39.738	ENSNLEG00000013551	SAFB	97	38.389	Nomascus_leucogenys
ENSGAFG00000016162	safb	60	35.243	ENSOPRG00000011561	-	98	35.065	Ochotona_princeps
ENSGAFG00000016162	safb	100	65.057	ENSONIG00000002318	safb	100	65.362	Oreochromis_niloticus
ENSGAFG00000016162	safb	98	64.442	ENSORLG00000016989	safb	100	63.658	Oryzias_latipes
ENSGAFG00000016162	safb	98	61.423	ENSORLG00020000404	safb	100	61.585	Oryzias_latipes_hni
ENSGAFG00000016162	safb	98	64.442	ENSORLG00015010733	safb	100	64.167	Oryzias_latipes_hsok
ENSGAFG00000016162	safb	100	65.558	ENSOMEG00000009066	safb	100	65.362	Oryzias_melastigma
ENSGAFG00000016162	safb	65	39.597	ENSOGAG00000027769	SAFB	92	40.982	Otolemur_garnettii
ENSGAFG00000016162	safb	98	36.713	ENSOARG00000007662	-	95	36.773	Ovis_aries
ENSGAFG00000016162	safb	82	36.351	ENSOARG00000007856	-	98	34.771	Ovis_aries
ENSGAFG00000016162	safb	67	39.442	ENSPPAG00000035129	SAFB	94	38.428	Pan_paniscus
ENSGAFG00000016162	safb	67	38.354	ENSPPRG00000017197	SAFB	94	37.418	Panthera_pardus
ENSGAFG00000016162	safb	67	39.442	ENSPTRG00000010335	SAFB	94	38.428	Pan_troglodytes
ENSGAFG00000016162	safb	67	39.138	ENSPANG00000007770	SAFB	94	38.537	Papio_anubis
ENSGAFG00000016162	safb	99	53.296	ENSPKIG00000009902	safb	99	53.691	Paramormyrops_kingsleyae
ENSGAFG00000016162	safb	98	42.040	ENSPSIG00000011679	-	96	43.195	Pelodiscus_sinensis
ENSGAFG00000016162	safb	98	41.834	ENSPSIG00000009367	-	94	42.002	Pelodiscus_sinensis
ENSGAFG00000016162	safb	52	45.850	ENSPCIG00000009504	-	99	45.850	Phascolarctos_cinereus
ENSGAFG00000016162	safb	100	93.214	ENSPFOG00000007745	safb	100	93.214	Poecilia_formosa
ENSGAFG00000016162	safb	100	95.311	ENSPLAG00000001614	safb	100	95.311	Poecilia_latipinna
ENSGAFG00000016162	safb	100	93.086	ENSPMEG00000021023	safb	100	93.086	Poecilia_mexicana
ENSGAFG00000016162	safb	100	93.982	ENSPREG00000012496	safb	100	94.110	Poecilia_reticulata
ENSGAFG00000016162	safb	67	38.975	ENSPPYG00000009428	SAFB	94	38.158	Pongo_abelii
ENSGAFG00000016162	safb	65	35.127	ENSPCAG00000006475	SAFB	94	35.076	Procavia_capensis
ENSGAFG00000016162	safb	95	40.118	ENSPCOG00000014090	SAFB	93	38.280	Propithecus_coquereli
ENSGAFG00000016162	safb	68	56.000	ENSPVAG00000004913	SAFB	68	42.593	Pteropus_vampyrus
ENSGAFG00000016162	safb	99	55.205	ENSPNAG00000021838	safb	99	55.747	Pygocentrus_nattereri
ENSGAFG00000016162	safb	67	39.092	ENSRROG00000029278	SAFB	94	38.428	Rhinopithecus_roxellana
ENSGAFG00000016162	safb	67	39.580	ENSSBOG00000026291	SAFB	94	38.251	Saimiri_boliviensis_boliviensis
ENSGAFG00000016162	safb	99	54.069	ENSSFOG00015008156	safb	99	55.022	Scleropages_formosus
ENSGAFG00000016162	safb	100	64.564	ENSSMAG00000009316	safb	100	65.711	Scophthalmus_maximus
ENSGAFG00000016162	safb	100	65.333	ENSSDUG00000009652	safb	100	66.788	Seriola_dumerili
ENSGAFG00000016162	safb	100	65.278	ENSSLDG00000001670	safb	100	65.509	Seriola_lalandi_dorsalis
ENSGAFG00000016162	safb	73	39.842	ENSSPUG00000009747	-	95	38.651	Sphenodon_punctatus
ENSGAFG00000016162	safb	98	64.190	ENSSPAG00000015682	safb	100	60.617	Stegastes_partitus
ENSGAFG00000016162	safb	95	40.761	ENSSSCG00000013522	SAFB	94	37.909	Sus_scrofa
ENSGAFG00000016162	safb	100	65.811	ENSTRUG00000003567	safb	100	65.694	Takifugu_rubripes
ENSGAFG00000016162	safb	91	56.473	ENSTNIG00000015470	safb	100	55.901	Tetraodon_nigroviridis
ENSGAFG00000016162	safb	86	72.222	ENSTTRG00000013588	SAFB	79	72.222	Tursiops_truncatus
ENSGAFG00000016162	safb	53	51.321	ENSVPAG00000012043	SAFB	51	47.661	Vicugna_pacos
ENSGAFG00000016162	safb	100	93.214	ENSXMAG00000003458	safb	100	93.214	Xiphophorus_maculatus