EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016215 (Gene tree)
Gene ID: -
Gene Symbol: ptrh1
Alias: zgc:112961
Full Name: peptidyl-tRNA hydrolase 1 homolog
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 9034 bases
Position: chrNHOQ01001472.1:781770-790803
Accession: ZDB-GENE-050306-33
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024038	Pept_tRNA_hydro	PF01195.19	6.7e-45	1	1
ENSGAFP00000024037	Pept_tRNA_hydro	PF01195.19	1.9e-44	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024288	-	2753	-	ENSGAFP00000024038	265 (aa)	-	-
ENSGAFT00000024287	-	714	-	ENSGAFP00000024037	237 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016215's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016215's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016215	ptrh1	87	53.365	ENSG00000187024	PTRH1	97	53.365	Homo_sapiens
ENSGAFG00000016215	ptrh1	98	79.310	ENSAPOG00000000947	PTRH1	93	79.310	Acanthochromis_polyacanthus
ENSGAFG00000016215	ptrh1	98	79.310	ENSAPOG00000010719	ptrh1	93	79.310	Acanthochromis_polyacanthus
ENSGAFG00000016215	ptrh1	98	79.310	ENSAPOG00000003014	-	93	79.310	Acanthochromis_polyacanthus
ENSGAFG00000016215	ptrh1	78	52.406	ENSAMEG00000016791	PTRH1	91	51.546	Ailuropoda_melanoleuca
ENSGAFG00000016215	ptrh1	83	84.772	ENSACIG00000006734	ptrh1	85	84.772	Amphilophus_citrinellus
ENSGAFG00000016215	ptrh1	97	81.712	ENSAOCG00000009725	ptrh1	93	80.534	Amphiprion_ocellaris
ENSGAFG00000016215	ptrh1	97	81.712	ENSAPEG00000020993	ptrh1	93	80.534	Amphiprion_percula
ENSGAFG00000016215	ptrh1	94	80.159	ENSATEG00000010003	ptrh1	90	80.159	Anabas_testudineus
ENSGAFG00000016215	ptrh1	87	55.769	ENSANAG00000025547	PTRH1	97	55.769	Aotus_nancymaae
ENSGAFG00000016215	ptrh1	98	77.736	ENSACLG00000025462	ptrh1	95	77.736	Astatotilapia_calliptera
ENSGAFG00000016215	ptrh1	93	60.643	ENSAMXG00000034117	ptrh1	92	60.643	Astyanax_mexicanus
ENSGAFG00000016215	ptrh1	86	54.589	ENSCJAG00000019841	PTRH1	76	58.696	Callithrix_jacchus
ENSGAFG00000016215	ptrh1	77	55.135	ENSCAFG00000020123	PTRH1	90	53.093	Canis_familiaris
ENSGAFG00000016215	ptrh1	77	55.435	ENSCAFG00020015776	PTRH1	87	53.368	Canis_lupus_dingo
ENSGAFG00000016215	ptrh1	82	56.633	ENSCHIG00000008188	PTRH1	92	56.633	Capra_hircus
ENSGAFG00000016215	ptrh1	53	57.937	ENSCAPG00000015926	PTRH1	92	57.031	Cavia_aperea
ENSGAFG00000016215	ptrh1	85	53.234	ENSCPOG00000023968	PTRH1	85	56.906	Cavia_porcellus
ENSGAFG00000016215	ptrh1	87	54.327	ENSCCAG00000023134	PTRH1	100	51.869	Cebus_capucinus
ENSGAFG00000016215	ptrh1	82	54.592	ENSCATG00000042852	PTRH1	96	52.195	Cercocebus_atys
ENSGAFG00000016215	ptrh1	85	54.187	ENSCLAG00000011155	PTRH1	94	54.187	Chinchilla_lanigera
ENSGAFG00000016215	ptrh1	82	54.592	ENSCSAG00000013748	PTRH1	90	52.195	Chlorocebus_sabaeus
ENSGAFG00000016215	ptrh1	70	54.491	ENSCPBG00000025207	PTRH1	95	54.491	Chrysemys_picta_bellii
ENSGAFG00000016215	ptrh1	82	54.592	ENSCANG00000039856	PTRH1	95	51.961	Colobus_angolensis_palliatus
ENSGAFG00000016215	ptrh1	78	56.522	ENSCGRG00001013108	Ptrh1	94	55.385	Cricetulus_griseus_chok1gshd
ENSGAFG00000016215	ptrh1	78	56.522	ENSCGRG00000016553	Ptrh1	99	56.522	Cricetulus_griseus_crigri
ENSGAFG00000016215	ptrh1	98	68.015	ENSCSEG00000010332	ptrh1	97	68.015	Cynoglossus_semilaevis
ENSGAFG00000016215	ptrh1	98	80.769	ENSCVAG00000010701	ptrh1	96	80.769	Cyprinodon_variegatus
ENSGAFG00000016215	ptrh1	97	56.589	ENSDARG00000098206	ptrh1	86	67.337	Danio_rerio
ENSGAFG00000016215	ptrh1	75	57.459	ENSDNOG00000024194	PTRH1	85	57.459	Dasypus_novemcinctus
ENSGAFG00000016215	ptrh1	89	52.113	ENSDORG00000013321	Ptrh1	93	52.113	Dipodomys_ordii
ENSGAFG00000016215	ptrh1	81	55.729	ENSEASG00005020466	PTRH1	90	55.729	Equus_asinus_asinus
ENSGAFG00000016215	ptrh1	81	55.729	ENSECAG00000007615	PTRH1	75	52.683	Equus_caballus
ENSGAFG00000016215	ptrh1	98	65.134	ENSELUG00000015467	ptrh1	96	65.134	Esox_lucius
ENSGAFG00000016215	ptrh1	73	56.322	ENSFCAG00000001483	PTRH1	86	55.435	Felis_catus
ENSGAFG00000016215	ptrh1	79	50.000	ENSFALG00000001352	PTRH1	93	50.000	Ficedula_albicollis
ENSGAFG00000016215	ptrh1	73	59.195	ENSFDAG00000020077	PTRH1	95	55.959	Fukomys_damarensis
ENSGAFG00000016215	ptrh1	92	82.927	ENSFHEG00000010590	ptrh1	99	82.061	Fundulus_heteroclitus
ENSGAFG00000016215	ptrh1	54	66.434	ENSGMOG00000009801	PTRH1	100	66.434	Gadus_morhua
ENSGAFG00000016215	ptrh1	76	78.607	ENSGACG00000014682	ptrh1	91	81.609	Gasterosteus_aculeatus
ENSGAFG00000016215	ptrh1	83	56.000	ENSGAGG00000022860	PTRH1	94	55.450	Gopherus_agassizii
ENSGAFG00000016215	ptrh1	87	52.885	ENSGGOG00000011033	PTRH1	97	52.885	Gorilla_gorilla
ENSGAFG00000016215	ptrh1	98	77.358	ENSHBUG00000020824	ptrh1	95	77.358	Haplochromis_burtoni
ENSGAFG00000016215	ptrh1	77	57.692	ENSHGLG00000019147	PTRH1	94	56.477	Heterocephalus_glaber_female
ENSGAFG00000016215	ptrh1	84	51.515	ENSHGLG00100003681	PTRH1	98	51.515	Heterocephalus_glaber_male
ENSGAFG00000016215	ptrh1	81	67.757	ENSHCOG00000014772	ptrh1	86	65.778	Hippocampus_comes
ENSGAFG00000016215	ptrh1	94	60.714	ENSIPUG00000015364	ptrh1	94	61.983	Ictalurus_punctatus
ENSGAFG00000016215	ptrh1	68	58.788	ENSSTOG00000008942	PTRH1	90	53.646	Ictidomys_tridecemlineatus
ENSGAFG00000016215	ptrh1	81	55.670	ENSJJAG00000014338	Ptrh1	94	55.670	Jaculus_jaculus
ENSGAFG00000016215	ptrh1	98	77.011	ENSKMAG00000003253	ptrh1	95	77.011	Kryptolebias_marmoratus
ENSGAFG00000016215	ptrh1	53	84.921	ENSLBEG00000028842	ptrh1	75	84.921	Labrus_bergylta
ENSGAFG00000016215	ptrh1	86	56.585	ENSLACG00000016741	PTRH1	85	56.585	Latimeria_chalumnae
ENSGAFG00000016215	ptrh1	81	52.308	ENSLAFG00000021934	PTRH1	95	52.308	Loxodonta_africana
ENSGAFG00000016215	ptrh1	82	54.592	ENSMFAG00000001700	PTRH1	96	52.195	Macaca_fascicularis
ENSGAFG00000016215	ptrh1	82	54.592	ENSMMUG00000016424	PTRH1	96	52.195	Macaca_mulatta
ENSGAFG00000016215	ptrh1	82	54.592	ENSMNEG00000033061	PTRH1	90	52.195	Macaca_nemestrina
ENSGAFG00000016215	ptrh1	96	77.647	ENSMAMG00000017386	ptrh1	93	77.647	Mastacembelus_armatus
ENSGAFG00000016215	ptrh1	90	76.860	ENSMZEG00005020001	ptrh1	95	76.860	Maylandia_zebra
ENSGAFG00000016215	ptrh1	78	57.065	ENSMAUG00000006266	Ptrh1	94	55.897	Mesocricetus_auratus
ENSGAFG00000016215	ptrh1	82	54.500	ENSMICG00000005611	PTRH1	93	54.500	Microcebus_murinus
ENSGAFG00000016215	ptrh1	72	59.064	ENSMOCG00000013992	Ptrh1	94	55.729	Microtus_ochrogaster
ENSGAFG00000016215	ptrh1	97	75.479	ENSMMOG00000014747	ptrh1	92	76.628	Mola_mola
ENSGAFG00000016215	ptrh1	83	54.315	ENSMODG00000005503	PTRH1	89	55.440	Monodelphis_domestica
ENSGAFG00000016215	ptrh1	64	77.632	ENSMALG00000005392	ptrh1	89	77.632	Monopterus_albus
ENSGAFG00000016215	ptrh1	72	59.649	MGP_CAROLIEiJ_G0023450	Ptrh1	89	58.242	Mus_caroli
ENSGAFG00000016215	ptrh1	72	59.649	ENSMUSG00000053746	Ptrh1	89	58.242	Mus_musculus
ENSGAFG00000016215	ptrh1	72	59.649	MGP_PahariEiJ_G0024907	Ptrh1	89	58.242	Mus_pahari
ENSGAFG00000016215	ptrh1	72	59.064	MGP_SPRETEiJ_G0024367	Ptrh1	89	57.692	Mus_spretus
ENSGAFG00000016215	ptrh1	78	54.787	ENSMPUG00000013790	PTRH1	89	53.571	Mustela_putorius_furo
ENSGAFG00000016215	ptrh1	78	52.525	ENSMLUG00000013454	PTRH1	91	52.475	Myotis_lucifugus
ENSGAFG00000016215	ptrh1	77	56.593	ENSNGAG00000014008	Ptrh1	96	54.872	Nannospalax_galili
ENSGAFG00000016215	ptrh1	98	77.358	ENSNBRG00000015590	ptrh1	95	77.358	Neolamprologus_brichardi
ENSGAFG00000016215	ptrh1	87	52.885	ENSNLEG00000017468	PTRH1	97	52.885	Nomascus_leucogenys
ENSGAFG00000016215	ptrh1	84	53.500	ENSODEG00000004012	PTRH1	95	53.500	Octodon_degus
ENSGAFG00000016215	ptrh1	92	76.923	ENSONIG00000013912	ptrh1	95	78.947	Oreochromis_niloticus
ENSGAFG00000016215	ptrh1	85	51.339	ENSOANG00000011891	PTRH1	93	51.376	Ornithorhynchus_anatinus
ENSGAFG00000016215	ptrh1	86	52.913	ENSOCUG00000006894	PTRH1	89	52.913	Oryctolagus_cuniculus
ENSGAFG00000016215	ptrh1	82	55.612	ENSOGAG00000008094	PTRH1	99	52.857	Otolemur_garnettii
ENSGAFG00000016215	ptrh1	81	51.707	ENSOARG00000011808	PTRH1	92	51.707	Ovis_aries
ENSGAFG00000016215	ptrh1	87	53.365	ENSPPAG00000041782	PTRH1	97	53.365	Pan_paniscus
ENSGAFG00000016215	ptrh1	77	54.945	ENSPPRG00000007889	PTRH1	90	54.167	Panthera_pardus
ENSGAFG00000016215	ptrh1	51	51.667	ENSPTIG00000021082	-	94	51.667	Panthera_tigris_altaica
ENSGAFG00000016215	ptrh1	87	53.365	ENSPTRG00000021394	PTRH1	97	53.365	Pan_troglodytes
ENSGAFG00000016215	ptrh1	82	46.231	ENSPANG00000031755	PTRH1	96	44.712	Papio_anubis
ENSGAFG00000016215	ptrh1	89	57.447	ENSPKIG00000005449	ptrh1	76	57.447	Paramormyrops_kingsleyae
ENSGAFG00000016215	ptrh1	84	50.673	ENSPSIG00000013828	PTRH1	81	50.673	Pelodiscus_sinensis
ENSGAFG00000016215	ptrh1	83	61.947	ENSPMGG00000002148	ptrh1	87	58.687	Periophthalmus_magnuspinnatus
ENSGAFG00000016215	ptrh1	66	62.821	ENSPEMG00000014360	Ptrh1	94	57.436	Peromyscus_maniculatus_bairdii
ENSGAFG00000016215	ptrh1	100	94.340	ENSPFOG00000003715	ptrh1	100	94.340	Poecilia_formosa
ENSGAFG00000016215	ptrh1	100	89.057	ENSPLAG00000023354	ptrh1	100	89.057	Poecilia_latipinna
ENSGAFG00000016215	ptrh1	100	94.340	ENSPMEG00000000447	ptrh1	100	94.340	Poecilia_mexicana
ENSGAFG00000016215	ptrh1	100	92.453	ENSPREG00000012612	ptrh1	100	92.453	Poecilia_reticulata
ENSGAFG00000016215	ptrh1	87	50.481	ENSPPYG00000019628	PTRH1	91	50.481	Pongo_abelii
ENSGAFG00000016215	ptrh1	81	55.670	ENSPCAG00000007016	PTRH1	89	55.670	Procavia_capensis
ENSGAFG00000016215	ptrh1	79	56.085	ENSPCOG00000014541	PTRH1	90	55.155	Propithecus_coquereli
ENSGAFG00000016215	ptrh1	79	57.143	ENSPVAG00000000954	PTRH1	88	57.143	Pteropus_vampyrus
ENSGAFG00000016215	ptrh1	98	77.358	ENSPNYG00000007789	ptrh1	95	77.358	Pundamilia_nyererei
ENSGAFG00000016215	ptrh1	97	61.628	ENSPNAG00000029930	ptrh1	95	61.628	Pygocentrus_nattereri
ENSGAFG00000016215	ptrh1	72	59.649	ENSRNOG00000049034	Ptrh1	89	58.242	Rattus_norvegicus
ENSGAFG00000016215	ptrh1	82	54.592	ENSRBIG00000027290	PTRH1	98	49.550	Rhinopithecus_bieti
ENSGAFG00000016215	ptrh1	82	54.592	ENSRROG00000028799	PTRH1	92	49.550	Rhinopithecus_roxellana
ENSGAFG00000016215	ptrh1	69	32.948	YHR189W	PTH1	97	32.804	Saccharomyces_cerevisiae
ENSGAFG00000016215	ptrh1	92	52.252	ENSSBOG00000026699	PTRH1	94	53.488	Saimiri_boliviensis_boliviensis
ENSGAFG00000016215	ptrh1	80	55.556	ENSSHAG00000018238	PTRH1	97	55.556	Sarcophilus_harrisii
ENSGAFG00000016215	ptrh1	75	68.539	ENSSFOG00015007053	ptrh1	84	69.412	Scleropages_formosus
ENSGAFG00000016215	ptrh1	83	77.228	ENSSMAG00000016747	ptrh1	86	77.228	Scophthalmus_maximus
ENSGAFG00000016215	ptrh1	89	74.262	ENSSDUG00000013471	ptrh1	96	78.059	Seriola_dumerili
ENSGAFG00000016215	ptrh1	84	74.752	ENSSLDG00000024662	ptrh1	89	79.208	Seriola_lalandi_dorsalis
ENSGAFG00000016215	ptrh1	78	55.135	ENSSPUG00000000040	PTRH1	86	54.592	Sphenodon_punctatus
ENSGAFG00000016215	ptrh1	87	81.818	ENSSPAG00000003298	ptrh1	96	80.851	Stegastes_partitus
ENSGAFG00000016215	ptrh1	79	56.915	ENSSSCG00000005615	PTRH1	90	55.208	Sus_scrofa
ENSGAFG00000016215	ptrh1	57	58.209	ENSTGUG00000003648	PTRH1	100	58.209	Taeniopygia_guttata
ENSGAFG00000016215	ptrh1	93	75.904	ENSTRUG00000019801	PTRH1	91	75.697	Takifugu_rubripes
ENSGAFG00000016215	ptrh1	82	78.680	ENSTNIG00000016735	ptrh1	99	75.785	Tetraodon_nigroviridis
ENSGAFG00000016215	ptrh1	82	53.061	ENSTTRG00000016458	PTRH1	92	53.061	Tursiops_truncatus
ENSGAFG00000016215	ptrh1	78	55.914	ENSUAMG00000023948	-	86	54.639	Ursus_americanus
ENSGAFG00000016215	ptrh1	73	45.402	ENSVPAG00000001805	PTRH1	100	43.956	Vicugna_pacos
ENSGAFG00000016215	ptrh1	77	55.435	ENSVVUG00000013198	PTRH1	83	55.435	Vulpes_vulpes
ENSGAFG00000016215	ptrh1	73	58.046	ENSXETG00000009980	ptrh1	95	57.627	Xenopus_tropicalis
ENSGAFG00000016215	ptrh1	85	94.554	ENSXCOG00000011498	ptrh1	88	93.204	Xiphophorus_couchianus
ENSGAFG00000016215	ptrh1	100	94.717	ENSXMAG00000009256	ptrh1	100	94.717	Xiphophorus_maculatus