EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016229 (Gene tree)
Gene ID: -
Gene Symbol: zfr
Alias: wu:fb25b08
Full Name: zinc finger RNA binding protein
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 55778 bases
Position: chrNHOQ01001596.1:997-56774
Accession: ZDB-GENE-030131-378
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024062	DZF	PF07528.14	7.1e-34	1	2
ENSGAFP00000024062	DZF	PF07528.14	7.1e-34	2	2
ENSGAFP00000024062	zf-met	PF12874.7	1.6e-21	1	3
ENSGAFP00000024062	zf-met	PF12874.7	1.6e-21	2	3
ENSGAFP00000024062	zf-met	PF12874.7	1.6e-21	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024312	-	2748	-	ENSGAFP00000024062	915 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016229's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016229's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016229	zfr	94	65.873	ENSGAFG00000014336	zfr2	74	70.635

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016229	zfr	100	68.880	ENSG00000056097	ZFR	99	61.687	Homo_sapiens
ENSGAFG00000016229	zfr	96	94.574	ENSAPOG00000009740	zfr	89	94.574	Acanthochromis_polyacanthus
ENSGAFG00000016229	zfr	100	68.880	ENSAMEG00000006184	ZFR	99	61.520	Ailuropoda_melanoleuca
ENSGAFG00000016229	zfr	96	93.023	ENSACIG00000015926	zfr	89	93.023	Amphilophus_citrinellus
ENSGAFG00000016229	zfr	100	81.385	ENSAOCG00000013876	zfr	99	73.333	Amphiprion_ocellaris
ENSGAFG00000016229	zfr	96	93.798	ENSAPEG00000024383	zfr	90	93.798	Amphiprion_percula
ENSGAFG00000016229	zfr	96	93.798	ENSATEG00000010271	zfr	89	93.798	Anabas_testudineus
ENSGAFG00000016229	zfr	81	61.205	ENSAPLG00000015627	-	73	64.194	Anas_platyrhynchos
ENSGAFG00000016229	zfr	100	58.471	ENSACAG00000007880	ZFR	99	58.748	Anolis_carolinensis
ENSGAFG00000016229	zfr	100	68.880	ENSANAG00000023333	ZFR	99	62.136	Aotus_nancymaae
ENSGAFG00000016229	zfr	96	92.248	ENSACLG00000016832	zfr	89	92.248	Astatotilapia_calliptera
ENSGAFG00000016229	zfr	94	87.597	ENSAMXG00000019511	zfr	83	87.597	Astyanax_mexicanus
ENSGAFG00000016229	zfr	100	68.880	ENSBTAG00000008414	ZFR	99	61.761	Bos_taurus
ENSGAFG00000016229	zfr	100	68.880	ENSCJAG00000018740	ZFR	99	65.290	Callithrix_jacchus
ENSGAFG00000016229	zfr	100	67.769	ENSCAFG00000018886	ZFR	99	59.375	Canis_familiaris
ENSGAFG00000016229	zfr	100	68.880	ENSCAFG00020016859	-	99	65.354	Canis_lupus_dingo
ENSGAFG00000016229	zfr	100	68.880	ENSCHIG00000007710	ZFR	99	61.882	Capra_hircus
ENSGAFG00000016229	zfr	97	59.030	ENSTSYG00000010670	ZFR	78	61.687	Carlito_syrichta
ENSGAFG00000016229	zfr	96	50.515	ENSCAPG00000015655	ZFR	99	47.983	Cavia_aperea
ENSGAFG00000016229	zfr	88	61.084	ENSCPOG00000000862	ZFR	78	54.994	Cavia_porcellus
ENSGAFG00000016229	zfr	100	68.880	ENSCCAG00000024473	ZFR	99	62.136	Cebus_capucinus
ENSGAFG00000016229	zfr	100	64.730	ENSCATG00000038311	ZFR	99	62.257	Cercocebus_atys
ENSGAFG00000016229	zfr	96	59.213	ENSCLAG00000007408	ZFR	79	61.985	Chinchilla_lanigera
ENSGAFG00000016229	zfr	100	60.459	ENSCSAG00000017180	ZFR	99	62.257	Chlorocebus_sabaeus
ENSGAFG00000016229	zfr	69	82.946	ENSCHOG00000003848	ZFR	63	82.946	Choloepus_hoffmanni
ENSGAFG00000016229	zfr	100	60.332	ENSCPBG00000024211	ZFR	99	62.440	Chrysemys_picta_bellii
ENSGAFG00000016229	zfr	100	60.550	ENSCANG00000017807	ZFR	99	62.379	Colobus_angolensis_palliatus
ENSGAFG00000016229	zfr	100	60.550	ENSCGRG00001016009	Zfr	99	61.446	Cricetulus_griseus_chok1gshd
ENSGAFG00000016229	zfr	83	61.196	ENSCGRG00000001228	Zfr	77	61.446	Cricetulus_griseus_crigri
ENSGAFG00000016229	zfr	96	91.473	ENSCSEG00000009224	zfr	89	91.473	Cynoglossus_semilaevis
ENSGAFG00000016229	zfr	96	89.922	ENSCSEG00000011169	ZFR	82	91.713	Cynoglossus_semilaevis
ENSGAFG00000016229	zfr	96	94.574	ENSCVAG00000016494	zfr	89	94.574	Cyprinodon_variegatus
ENSGAFG00000016229	zfr	96	85.156	ENSDARG00000027109	zfr	83	84.496	Danio_rerio
ENSGAFG00000016229	zfr	100	68.880	ENSDNOG00000008852	ZFR	99	62.228	Dasypus_novemcinctus
ENSGAFG00000016229	zfr	100	70.000	ENSDORG00000016643	Zfr	99	60.917	Dipodomys_ordii
ENSGAFG00000016229	zfr	100	69.198	ENSETEG00000008937	ZFR	99	56.711	Echinops_telfairi
ENSGAFG00000016229	zfr	100	68.465	ENSEASG00005007104	ZFR	99	61.641	Equus_asinus_asinus
ENSGAFG00000016229	zfr	85	80.645	ENSEEUG00000014206	ZFR	61	83.206	Erinaceus_europaeus
ENSGAFG00000016229	zfr	96	92.248	ENSELUG00000022743	zfr	87	92.248	Esox_lucius
ENSGAFG00000016229	zfr	100	68.880	ENSFCAG00000000354	ZFR	99	61.641	Felis_catus
ENSGAFG00000016229	zfr	100	59.314	ENSFALG00000002149	ZFR	99	59.256	Ficedula_albicollis
ENSGAFG00000016229	zfr	99	59.870	ENSFDAG00000012993	ZFR	77	61.864	Fukomys_damarensis
ENSGAFG00000016229	zfr	57	96.899	ENSFHEG00000012064	zfr	96	85.417	Fundulus_heteroclitus
ENSGAFG00000016229	zfr	90	93.243	ENSGMOG00000003967	zfr	76	91.935	Gadus_morhua
ENSGAFG00000016229	zfr	100	60.407	ENSGALG00000034488	-	99	59.146	Gallus_gallus
ENSGAFG00000016229	zfr	100	60.185	ENSGALG00000003235	-	99	60.204	Gallus_gallus
ENSGAFG00000016229	zfr	99	75.431	ENSGACG00000005045	zfr	99	63.967	Gasterosteus_aculeatus
ENSGAFG00000016229	zfr	94	58.869	ENSGAGG00000013544	ZFR	99	60.649	Gopherus_agassizii
ENSGAFG00000016229	zfr	100	69.295	ENSGGOG00000016302	ZFR	99	61.687	Gorilla_gorilla
ENSGAFG00000016229	zfr	100	68.465	ENSHGLG00000008088	ZFR	99	61.985	Heterocephalus_glaber_female
ENSGAFG00000016229	zfr	96	59.465	ENSHGLG00100016776	ZFR	97	58.309	Heterocephalus_glaber_male
ENSGAFG00000016229	zfr	100	66.265	ENSHCOG00000001548	zfr	99	66.728	Hippocampus_comes
ENSGAFG00000016229	zfr	99	89.147	ENSIPUG00000008192	zfr	87	89.147	Ictalurus_punctatus
ENSGAFG00000016229	zfr	100	68.511	ENSSTOG00000008742	ZFR	99	61.566	Ictidomys_tridecemlineatus
ENSGAFG00000016229	zfr	83	56.316	ENSJJAG00000023064	Zfr	76	57.646	Jaculus_jaculus
ENSGAFG00000016229	zfr	86	94.737	ENSKMAG00000009468	zfr	88	94.737	Kryptolebias_marmoratus
ENSGAFG00000016229	zfr	100	62.791	ENSLACG00000000831	ZFR	85	86.719	Latimeria_chalumnae
ENSGAFG00000016229	zfr	100	75.000	ENSLOCG00000006727	zfr	85	89.922	Lepisosteus_oculatus
ENSGAFG00000016229	zfr	96	61.452	ENSLAFG00000002308	ZFR	99	54.310	Loxodonta_africana
ENSGAFG00000016229	zfr	100	64.730	ENSMFAG00000042691	ZFR	99	62.257	Macaca_fascicularis
ENSGAFG00000016229	zfr	100	68.880	ENSMMUG00000001317	ZFR	99	62.257	Macaca_mulatta
ENSGAFG00000016229	zfr	100	64.730	ENSMNEG00000029441	ZFR	99	62.257	Macaca_nemestrina
ENSGAFG00000016229	zfr	100	58.127	ENSMLEG00000028503	ZFR	79	62.257	Mandrillus_leucophaeus
ENSGAFG00000016229	zfr	96	93.023	ENSMAMG00000017351	zfr	89	93.023	Mastacembelus_armatus
ENSGAFG00000016229	zfr	96	92.248	ENSMZEG00005021243	zfr	89	92.248	Maylandia_zebra
ENSGAFG00000016229	zfr	100	68.880	ENSMAUG00000000976	Zfr	93	80.952	Mesocricetus_auratus
ENSGAFG00000016229	zfr	100	68.465	ENSMICG00000001244	ZFR	99	61.566	Microcebus_murinus
ENSGAFG00000016229	zfr	100	68.880	ENSMOCG00000018630	Zfr	93	80.952	Microtus_ochrogaster
ENSGAFG00000016229	zfr	100	67.152	ENSMMOG00000012585	zfr	84	100.000	Mola_mola
ENSGAFG00000016229	zfr	100	59.926	ENSMODG00000020412	ZFR	99	59.300	Monodelphis_domestica
ENSGAFG00000016229	zfr	91	93.243	ENSMALG00000007123	zfr	94	98.387	Monopterus_albus
ENSGAFG00000016229	zfr	100	68.880	MGP_CAROLIEiJ_G0019681	Zfr	99	61.928	Mus_caroli
ENSGAFG00000016229	zfr	100	60.531	ENSMUSG00000022201	Zfr	99	62.048	Mus_musculus
ENSGAFG00000016229	zfr	100	68.880	MGP_PahariEiJ_G0016057	Zfr	99	62.139	Mus_pahari
ENSGAFG00000016229	zfr	100	60.570	MGP_SPRETEiJ_G0020574	Zfr	99	62.048	Mus_spretus
ENSGAFG00000016229	zfr	96	65.174	ENSMLUG00000011797	ZFR	93	80.137	Myotis_lucifugus
ENSGAFG00000016229	zfr	100	68.880	ENSNGAG00000018328	Zfr	99	62.136	Nannospalax_galili
ENSGAFG00000016229	zfr	100	75.733	ENSNBRG00000008378	zfr	99	75.329	Neolamprologus_brichardi
ENSGAFG00000016229	zfr	96	59.408	ENSNLEG00000014098	ZFR	99	58.262	Nomascus_leucogenys
ENSGAFG00000016229	zfr	92	83.721	ENSMEUG00000010225	ZFR	89	83.721	Notamacropus_eugenii
ENSGAFG00000016229	zfr	96	59.021	ENSODEG00000001990	ZFR	79	61.372	Octodon_degus
ENSGAFG00000016229	zfr	96	59.885	ENSOANG00000014434	ZFR	99	58.960	Ornithorhynchus_anatinus
ENSGAFG00000016229	zfr	100	68.880	ENSOCUG00000016737	ZFR	99	61.939	Oryctolagus_cuniculus
ENSGAFG00000016229	zfr	97	87.786	ENSORLG00000017243	zfr	90	87.786	Oryzias_latipes
ENSGAFG00000016229	zfr	97	87.786	ENSORLG00020014823	zfr	90	87.786	Oryzias_latipes_hni
ENSGAFG00000016229	zfr	97	87.786	ENSORLG00015005801	zfr	90	87.786	Oryzias_latipes_hsok
ENSGAFG00000016229	zfr	96	89.922	ENSOMEG00000003336	zfr	89	89.922	Oryzias_melastigma
ENSGAFG00000016229	zfr	100	68.880	ENSOGAG00000015117	ZFR	99	58.845	Otolemur_garnettii
ENSGAFG00000016229	zfr	96	57.990	ENSOARG00000012233	ZFR	79	62.002	Ovis_aries
ENSGAFG00000016229	zfr	96	59.369	ENSPPAG00000027447	ZFR	79	61.687	Pan_paniscus
ENSGAFG00000016229	zfr	100	68.880	ENSPPRG00000008253	ZFR	99	61.641	Panthera_pardus
ENSGAFG00000016229	zfr	83	61.150	ENSPTIG00000010038	ZFR	76	61.641	Panthera_tigris_altaica
ENSGAFG00000016229	zfr	100	68.880	ENSPTRG00000016771	ZFR	99	61.687	Pan_troglodytes
ENSGAFG00000016229	zfr	100	59.225	ENSPANG00000003729	ZFR	99	59.223	Papio_anubis
ENSGAFG00000016229	zfr	99	63.324	ENSPKIG00000007596	ZFR	99	63.815	Paramormyrops_kingsleyae
ENSGAFG00000016229	zfr	96	87.597	ENSPKIG00000016781	ZFR	89	87.597	Paramormyrops_kingsleyae
ENSGAFG00000016229	zfr	51	84.496	ENSPSIG00000005779	ZFR	78	84.496	Pelodiscus_sinensis
ENSGAFG00000016229	zfr	82	65.613	ENSPMGG00000015984	zfr	69	90.000	Periophthalmus_magnuspinnatus
ENSGAFG00000016229	zfr	96	68.880	ENSPEMG00000014573	Zfr	92	80.952	Peromyscus_maniculatus_bairdii
ENSGAFG00000016229	zfr	100	59.871	ENSPCIG00000020906	ZFR	99	59.246	Phascolarctos_cinereus
ENSGAFG00000016229	zfr	96	100.000	ENSPFOG00000005931	zfr	83	100.000	Poecilia_formosa
ENSGAFG00000016229	zfr	50	94.748	ENSPLAG00000001158	zfr	95	94.912	Poecilia_latipinna
ENSGAFG00000016229	zfr	52	95.378	ENSPMEG00000001926	zfr	96	95.378	Poecilia_mexicana
ENSGAFG00000016229	zfr	100	75.445	ENSPREG00000011947	zfr	83	100.000	Poecilia_reticulata
ENSGAFG00000016229	zfr	96	59.121	ENSPPYG00000015378	ZFR	79	61.772	Pongo_abelii
ENSGAFG00000016229	zfr	96	82.171	ENSPCAG00000007277	ZFR	90	82.171	Procavia_capensis
ENSGAFG00000016229	zfr	94	68.880	ENSPCOG00000000045	ZFR	99	59.794	Propithecus_coquereli
ENSGAFG00000016229	zfr	96	92.248	ENSPNYG00000006239	zfr	89	92.248	Pundamilia_nyererei
ENSGAFG00000016229	zfr	99	88.281	ENSPNAG00000025151	zfr	93	87.597	Pygocentrus_nattereri
ENSGAFG00000016229	zfr	100	68.880	ENSRNOG00000011627	Zfr	99	82.812	Rattus_norvegicus
ENSGAFG00000016229	zfr	100	68.880	ENSRBIG00000041561	ZFR	99	62.379	Rhinopithecus_bieti
ENSGAFG00000016229	zfr	100	65.975	ENSRROG00000044008	ZFR	99	62.379	Rhinopithecus_roxellana
ENSGAFG00000016229	zfr	83	60.635	ENSSBOG00000024150	ZFR	78	61.687	Saimiri_boliviensis_boliviensis
ENSGAFG00000016229	zfr	96	59.139	ENSSHAG00000015478	ZFR	99	58.102	Sarcophilus_harrisii
ENSGAFG00000016229	zfr	50	71.522	ENSSFOG00015018366	zfr	93	75.115	Scleropages_formosus
ENSGAFG00000016229	zfr	99	87.597	ENSSFOG00015017300	ZFR	87	87.597	Scleropages_formosus
ENSGAFG00000016229	zfr	96	93.023	ENSSMAG00000000320	zfr	89	93.023	Scophthalmus_maximus
ENSGAFG00000016229	zfr	98	83.333	ENSSDUG00000013882	zfr	87	86.430	Seriola_dumerili
ENSGAFG00000016229	zfr	100	76.700	ENSSLDG00000000762	zfr	99	76.200	Seriola_lalandi_dorsalis
ENSGAFG00000016229	zfr	73	82.171	ENSSARG00000006571	ZFR	62	82.171	Sorex_araneus
ENSGAFG00000016229	zfr	96	60.653	ENSSPUG00000016786	ZFR	79	62.182	Sphenodon_punctatus
ENSGAFG00000016229	zfr	96	93.798	ENSSPAG00000019293	zfr	99	69.860	Stegastes_partitus
ENSGAFG00000016229	zfr	100	68.880	ENSSSCG00000027681	ZFR	99	65.842	Sus_scrofa
ENSGAFG00000016229	zfr	99	59.331	ENSTGUG00000001909	ZFR	99	58.977	Taeniopygia_guttata
ENSGAFG00000016229	zfr	100	80.000	ENSTRUG00000016620	zfr	93	80.110	Takifugu_rubripes
ENSGAFG00000016229	zfr	53	89.147	ENSTNIG00000018856	zfr	80	89.147	Tetraodon_nigroviridis
ENSGAFG00000016229	zfr	90	82.171	ENSTBEG00000017687	ZFR	83	82.171	Tupaia_belangeri
ENSGAFG00000016229	zfr	83	58.899	ENSTTRG00000017321	ZFR	76	59.228	Tursiops_truncatus
ENSGAFG00000016229	zfr	65	69.508	ENSUAMG00000000172	-	68	70.187	Ursus_americanus
ENSGAFG00000016229	zfr	65	69.508	ENSUMAG00000013805	-	68	70.187	Ursus_maritimus
ENSGAFG00000016229	zfr	83	60.890	ENSVPAG00000011011	ZFR	76	61.399	Vicugna_pacos
ENSGAFG00000016229	zfr	100	68.880	ENSVVUG00000022171	-	99	61.641	Vulpes_vulpes
ENSGAFG00000016229	zfr	100	57.409	ENSXETG00000015598	zfr	93	72.727	Xenopus_tropicalis
ENSGAFG00000016229	zfr	96	100.000	ENSXCOG00000009361	zfr	83	100.000	Xiphophorus_couchianus
ENSGAFG00000016229	zfr	96	100.000	ENSXMAG00000013356	zfr	83	100.000	Xiphophorus_maculatus