EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016353 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 1469 bases
Position: chrNHOQ01001879.1:1527583-1529051
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024230	zf-C2H2	PF00096.26	5.3e-18	1	3
ENSGAFP00000024230	zf-C2H2	PF00096.26	5.3e-18	2	3
ENSGAFP00000024230	zf-C2H2	PF00096.26	5.3e-18	3	3
ENSGAFP00000024230	zf-met	PF12874.7	2.8e-12	1	2
ENSGAFP00000024230	zf-met	PF12874.7	2.8e-12	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024482	-	705	-	ENSGAFP00000024230	234 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016353's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016353's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016353	-	77	36.082	ENSGAFG00000011288	-	77	36.082
ENSGAFG00000016353	-	71	35.366	ENSGAFG00000011290	-	51	35.366
ENSGAFG00000016353	-	82	35.088	ENSGAFG00000021140	-	99	35.088
ENSGAFG00000016353	-	74	34.524	ENSGAFG00000013624	-	52	34.524
ENSGAFG00000016353	-	86	32.624	ENSGAFG00000014188	-	92	33.708
ENSGAFG00000016353	-	85	33.146	ENSGAFG00000021131	-	71	33.146
ENSGAFG00000016353	-	79	33.333	ENSGAFG00000014413	-	78	33.333
ENSGAFG00000016353	-	74	38.889	ENSGAFG00000020499	-	59	38.889
ENSGAFG00000016353	-	75	31.720	ENSGAFG00000013053	-	53	31.720
ENSGAFG00000016353	-	77	41.573	ENSGAFG00000001481	-	83	34.320
ENSGAFG00000016353	-	94	33.036	ENSGAFG00000016093	-	68	33.036
ENSGAFG00000016353	-	85	55.556	ENSGAFG00000000345	si:dkey-89b17.4	75	55.556
ENSGAFG00000016353	-	76	32.184	ENSGAFG00000013396	-	81	32.184
ENSGAFG00000016353	-	76	41.111	ENSGAFG00000013969	-	90	41.111
ENSGAFG00000016353	-	79	30.645	ENSGAFG00000013006	-	66	33.333
ENSGAFG00000016353	-	69	33.793	ENSGAFG00000013000	-	57	33.793
ENSGAFG00000016353	-	74	40.625	ENSGAFG00000018645	-	60	40.625
ENSGAFG00000016353	-	79	36.313	ENSGAFG00000003150	-	97	36.313
ENSGAFG00000016353	-	84	38.384	ENSGAFG00000008274	-	94	32.544
ENSGAFG00000016353	-	74	33.696	ENSGAFG00000012004	-	52	33.929
ENSGAFG00000016353	-	90	33.136	ENSGAFG00000011326	-	96	36.170
ENSGAFG00000016353	-	72	32.353	ENSGAFG00000008226	-	70	32.353
ENSGAFG00000016353	-	71	35.429	ENSGAFG00000011924	-	78	35.429
ENSGAFG00000016353	-	74	34.375	ENSGAFG00000013048	-	66	32.995
ENSGAFG00000016353	-	68	41.772	ENSGAFG00000001879	-	58	41.772
ENSGAFG00000016353	-	72	40.449	ENSGAFG00000007098	-	81	35.028
ENSGAFG00000016353	-	76	35.714	ENSGAFG00000011999	-	77	35.714
ENSGAFG00000016353	-	73	32.530	ENSGAFG00000020507	-	53	32.530
ENSGAFG00000016353	-	72	34.270	ENSGAFG00000011906	-	58	34.270
ENSGAFG00000016353	-	92	33.673	ENSGAFG00000013934	-	98	35.714
ENSGAFG00000016353	-	76	32.456	ENSGAFG00000013066	-	71	32.456
ENSGAFG00000016353	-	71	34.857	ENSGAFG00000013911	-	96	34.857
ENSGAFG00000016353	-	74	31.694	ENSGAFG00000016322	-	66	31.694
ENSGAFG00000016353	-	74	41.667	ENSGAFG00000011884	-	82	35.838
ENSGAFG00000016353	-	85	31.325	ENSGAFG00000010983	-	86	31.325
ENSGAFG00000016353	-	71	34.118	ENSGAFG00000011938	-	64	34.118
ENSGAFG00000016353	-	75	35.632	ENSGAFG00000011940	-	69	35.632
ENSGAFG00000016353	-	91	35.484	ENSGAFG00000018659	-	90	35.484
ENSGAFG00000016353	-	76	40.449	ENSGAFG00000008231	-	64	40.449
ENSGAFG00000016353	-	85	34.286	ENSGAFG00000001402	-	69	34.286
ENSGAFG00000016353	-	90	31.034	ENSGAFG00000012035	-	84	36.458
ENSGAFG00000016353	-	84	31.737	ENSGAFG00000014369	-	91	33.529
ENSGAFG00000016353	-	75	36.264	ENSGAFG00000000266	-	71	36.264
ENSGAFG00000016353	-	76	30.588	ENSGAFG00000007110	-	66	30.588
ENSGAFG00000016353	-	91	41.880	ENSGAFG00000013491	-	67	41.880
ENSGAFG00000016353	-	72	44.186	ENSGAFG00000010637	-	76	44.186
ENSGAFG00000016353	-	77	32.143	ENSGAFG00000013462	-	65	32.143
ENSGAFG00000016353	-	69	30.851	ENSGAFG00000003119	-	60	30.851
ENSGAFG00000016353	-	74	34.503	ENSGAFG00000018302	-	71	34.503
ENSGAFG00000016353	-	82	38.835	ENSGAFG00000012767	-	71	38.835

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016353	-	89	52.381	ENSAPOG00000020151	znf646	73	52.381	Acanthochromis_polyacanthus
ENSGAFG00000016353	-	85	53.968	ENSAPOG00000018015	si:dkey-89b17.4	65	53.968	Acanthochromis_polyacanthus
ENSGAFG00000016353	-	93	55.556	ENSACIG00000001025	si:dkey-89b17.4	72	55.556	Amphilophus_citrinellus
ENSGAFG00000016353	-	94	50.000	ENSACIG00000023049	znf646	99	50.000	Amphilophus_citrinellus
ENSGAFG00000016353	-	85	53.968	ENSAOCG00000018684	si:dkey-89b17.4	65	53.968	Amphiprion_ocellaris
ENSGAFG00000016353	-	89	52.381	ENSAOCG00000012062	znf646	71	52.381	Amphiprion_ocellaris
ENSGAFG00000016353	-	93	53.968	ENSAPEG00000007719	si:dkey-89b17.4	73	53.968	Amphiprion_percula
ENSGAFG00000016353	-	89	52.381	ENSAPEG00000006427	znf646	71	52.381	Amphiprion_percula
ENSGAFG00000016353	-	88	55.952	ENSATEG00000015206	znf646	67	55.952	Anabas_testudineus
ENSGAFG00000016353	-	85	53.968	ENSATEG00000016814	si:dkey-89b17.4	65	53.968	Anabas_testudineus
ENSGAFG00000016353	-	88	55.422	ENSACLG00000012712	znf646	64	55.422	Astatotilapia_calliptera
ENSGAFG00000016353	-	85	55.556	ENSACLG00000016017	si:dkey-89b17.4	65	55.556	Astatotilapia_calliptera
ENSGAFG00000016353	-	89	50.000	ENSAMXG00000001155	si:dkey-89b17.4	62	50.000	Astyanax_mexicanus
ENSGAFG00000016353	-	88	55.556	ENSAMXG00000035525	znf646	63	55.556	Astyanax_mexicanus
ENSGAFG00000016353	-	88	54.762	ENSCSEG00000012389	znf646	64	54.762	Cynoglossus_semilaevis
ENSGAFG00000016353	-	95	53.968	ENSCSEG00000010769	si:dkey-89b17.4	76	53.968	Cynoglossus_semilaevis
ENSGAFG00000016353	-	87	55.556	ENSCVAG00000012420	si:dkey-89b17.4	74	55.556	Cyprinodon_variegatus
ENSGAFG00000016353	-	88	51.316	ENSDARG00000075545	si:dkey-89b17.4	92	48.936	Danio_rerio
ENSGAFG00000016353	-	89	58.025	ENSDARG00000061424	znf646	99	40.449	Danio_rerio
ENSGAFG00000016353	-	80	51.250	ENSELUG00000015516	si:dkey-89b17.4	65	51.250	Esox_lucius
ENSGAFG00000016353	-	88	59.649	ENSELUG00000010423	znf646	67	59.649	Esox_lucius
ENSGAFG00000016353	-	85	55.556	ENSFHEG00000019457	si:dkey-89b17.4	63	55.556	Fundulus_heteroclitus
ENSGAFG00000016353	-	95	55.941	ENSFHEG00000000561	znf646	79	52.564	Fundulus_heteroclitus
ENSGAFG00000016353	-	88	52.941	ENSGMOG00000016554	znf646	75	52.941	Gadus_morhua
ENSGAFG00000016353	-	85	57.143	ENSGACG00000014714	si:dkey-89b17.4	76	57.143	Gasterosteus_aculeatus
ENSGAFG00000016353	-	88	55.294	ENSGACG00000008733	znf646	69	55.294	Gasterosteus_aculeatus
ENSGAFG00000016353	-	85	55.556	ENSHBUG00000013093	si:dkey-89b17.4	65	55.556	Haplochromis_burtoni
ENSGAFG00000016353	-	88	54.762	ENSHBUG00000004840	znf646	65	54.762	Haplochromis_burtoni
ENSGAFG00000016353	-	88	55.952	ENSHCOG00000014890	znf646	63	55.952	Hippocampus_comes
ENSGAFG00000016353	-	82	53.968	ENSHCOG00000001901	si:dkey-89b17.4	76	53.968	Hippocampus_comes
ENSGAFG00000016353	-	93	52.542	ENSIPUG00000012845	si:dkey-89b17.4	64	50.000	Ictalurus_punctatus
ENSGAFG00000016353	-	89	58.929	ENSIPUG00000018102	znf646	66	58.929	Ictalurus_punctatus
ENSGAFG00000016353	-	74	44.318	ENSIPUG00000012830	-	77	44.318	Ictalurus_punctatus
ENSGAFG00000016353	-	85	48.214	ENSKMAG00000014037	si:dkey-89b17.4	65	48.214	Kryptolebias_marmoratus
ENSGAFG00000016353	-	88	54.762	ENSKMAG00000011982	znf646	63	54.762	Kryptolebias_marmoratus
ENSGAFG00000016353	-	88	56.410	ENSLBEG00000016562	znf646	57	56.410	Labrus_bergylta
ENSGAFG00000016353	-	85	53.968	ENSLBEG00000020291	si:dkey-89b17.4	74	53.968	Labrus_bergylta
ENSGAFG00000016353	-	71	55.556	ENSLOCG00000003238	si:dkey-89b17.4	62	55.556	Lepisosteus_oculatus
ENSGAFG00000016353	-	88	52.459	ENSMAMG00000009313	znf646	65	52.459	Mastacembelus_armatus
ENSGAFG00000016353	-	85	53.968	ENSMAMG00000009604	si:dkey-89b17.4	65	53.968	Mastacembelus_armatus
ENSGAFG00000016353	-	88	55.422	ENSMZEG00005011264	znf646	65	55.422	Maylandia_zebra
ENSGAFG00000016353	-	85	55.556	ENSMZEG00005003901	si:dkey-89b17.4	65	55.556	Maylandia_zebra
ENSGAFG00000016353	-	80	54.545	ENSMMOG00000002311	znf646	58	54.545	Mola_mola
ENSGAFG00000016353	-	87	53.968	ENSMMOG00000012741	si:dkey-89b17.4	73	53.968	Mola_mola
ENSGAFG00000016353	-	88	50.746	ENSMALG00000002274	-	99	50.746	Monopterus_albus
ENSGAFG00000016353	-	93	53.968	ENSMALG00000019558	si:dkey-89b17.4	68	53.968	Monopterus_albus
ENSGAFG00000016353	-	88	55.422	ENSNBRG00000022534	znf646	65	55.422	Neolamprologus_brichardi
ENSGAFG00000016353	-	93	55.556	ENSNBRG00000020314	si:dkey-89b17.4	73	55.556	Neolamprologus_brichardi
ENSGAFG00000016353	-	82	44.131	ENSONIG00000009324	si:dkey-89b17.4	98	44.131	Oreochromis_niloticus
ENSGAFG00000016353	-	87	52.273	ENSONIG00000019947	-	97	52.273	Oreochromis_niloticus
ENSGAFG00000016353	-	87	55.556	ENSORLG00000024255	si:dkey-89b17.4	73	55.556	Oryzias_latipes
ENSGAFG00000016353	-	88	52.381	ENSORLG00000007885	znf646	65	52.381	Oryzias_latipes
ENSGAFG00000016353	-	88	51.190	ENSORLG00020010285	znf646	64	51.190	Oryzias_latipes_hni
ENSGAFG00000016353	-	88	52.381	ENSORLG00015008733	znf646	67	52.381	Oryzias_latipes_hsok
ENSGAFG00000016353	-	97	52.500	ENSOMEG00000015658	znf646	67	52.500	Oryzias_melastigma
ENSGAFG00000016353	-	95	55.556	ENSOMEG00000020587	si:dkey-89b17.4	70	55.556	Oryzias_melastigma
ENSGAFG00000016353	-	87	38.247	ENSPMGG00000015931	-	92	36.604	Periophthalmus_magnuspinnatus
ENSGAFG00000016353	-	91	53.623	ENSPMGG00000004639	znf646	75	53.623	Periophthalmus_magnuspinnatus
ENSGAFG00000016353	-	93	55.556	ENSPFOG00000008241	si:dkey-89b17.4	75	55.556	Poecilia_formosa
ENSGAFG00000016353	-	94	68.493	ENSPFOG00000004826	-	94	68.493	Poecilia_formosa
ENSGAFG00000016353	-	88	93.689	ENSPLAG00000010454	-	87	93.689	Poecilia_latipinna
ENSGAFG00000016353	-	85	55.556	ENSPLAG00000011382	si:dkey-89b17.4	75	55.556	Poecilia_latipinna
ENSGAFG00000016353	-	85	55.556	ENSPMEG00000000141	si:dkey-89b17.4	75	55.556	Poecilia_mexicana
ENSGAFG00000016353	-	88	93.689	ENSPMEG00000018283	znf646	83	93.689	Poecilia_mexicana
ENSGAFG00000016353	-	86	93.069	ENSPREG00000017637	znf646	86	93.069	Poecilia_reticulata
ENSGAFG00000016353	-	85	55.556	ENSPREG00000012579	si:dkey-89b17.4	75	55.556	Poecilia_reticulata
ENSGAFG00000016353	-	88	55.422	ENSPNYG00000017692	znf646	65	55.422	Pundamilia_nyererei
ENSGAFG00000016353	-	85	55.556	ENSPNYG00000011901	si:dkey-89b17.4	65	55.556	Pundamilia_nyererei
ENSGAFG00000016353	-	88	55.422	ENSPNAG00000000750	znf646	69	55.422	Pygocentrus_nattereri
ENSGAFG00000016353	-	82	52.542	ENSPNAG00000022072	si:dkey-89b17.4	63	50.000	Pygocentrus_nattereri
ENSGAFG00000016353	-	82	50.000	ENSSFOG00015004737	si:dkey-89b17.4	62	50.000	Scleropages_formosus
ENSGAFG00000016353	-	88	55.952	ENSSMAG00000012378	znf646	70	55.952	Scophthalmus_maximus
ENSGAFG00000016353	-	88	53.571	ENSSDUG00000002675	znf646	63	53.571	Seriola_dumerili
ENSGAFG00000016353	-	85	53.968	ENSSDUG00000015931	si:dkey-89b17.4	63	53.968	Seriola_dumerili
ENSGAFG00000016353	-	88	53.571	ENSSLDG00000018521	znf646	68	53.571	Seriola_lalandi_dorsalis
ENSGAFG00000016353	-	85	53.968	ENSSLDG00000012415	si:dkey-89b17.4	63	53.968	Seriola_lalandi_dorsalis
ENSGAFG00000016353	-	85	55.556	ENSSPAG00000018810	si:dkey-89b17.4	77	55.556	Stegastes_partitus
ENSGAFG00000016353	-	88	53.571	ENSSPAG00000016701	znf646	70	53.571	Stegastes_partitus
ENSGAFG00000016353	-	88	51.807	ENSTRUG00000025597	znf646	79	51.807	Takifugu_rubripes
ENSGAFG00000016353	-	93	53.968	ENSTRUG00000020495	si:dkey-89b17.4	74	53.968	Takifugu_rubripes
ENSGAFG00000016353	-	82	52.381	ENSTNIG00000001159	si:dkey-89b17.4	96	52.381	Tetraodon_nigroviridis
ENSGAFG00000016353	-	83	52.239	ENSTNIG00000000073	znf646	93	52.239	Tetraodon_nigroviridis
ENSGAFG00000016353	-	90	92.381	ENSXCOG00000002714	-	95	92.381	Xiphophorus_couchianus
ENSGAFG00000016353	-	93	55.556	ENSXCOG00000001645	si:dkey-89b17.4	72	55.556	Xiphophorus_couchianus
ENSGAFG00000016353	-	88	95.631	ENSXMAG00000018743	-	88	95.631	Xiphophorus_maculatus
ENSGAFG00000016353	-	93	55.556	ENSXMAG00000024528	si:dkey-89b17.4	75	55.556	Xiphophorus_maculatus