EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016445 (Gene tree)
Gene ID: -
Gene Symbol: oscp1a
Alias: oscp1|zgc:171454
Full Name: organic solute carrier partner 1a
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 586 bases
Position: chrNHOQ01001760.1:4709-5294
Accession: ZDB-GENE-080204-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024375	LSM	PF01423.22	6e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024630	-	372	-	ENSGAFP00000024375	123 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016445's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016445's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016445	oscp1a	85	60.550	ENSG00000181817	LSM10	89	60.550	Homo_sapiens
ENSGAFG00000016445	oscp1a	93	60.870	ENSAMEG00000019854	LSM10	91	60.870	Ailuropoda_melanoleuca
ENSGAFG00000016445	oscp1a	87	69.159	ENSACIG00000015420	oscp1a	71	69.159	Amphilophus_citrinellus
ENSGAFG00000016445	oscp1a	87	72.897	ENSAOCG00000014654	-	88	72.897	Amphiprion_ocellaris
ENSGAFG00000016445	oscp1a	87	72.897	ENSAOCG00000015618	LSM10	88	72.897	Amphiprion_ocellaris
ENSGAFG00000016445	oscp1a	80	71.000	ENSAOCG00000015607	LSM10	78	71.000	Amphiprion_ocellaris
ENSGAFG00000016445	oscp1a	87	72.897	ENSAPEG00000021845	-	88	72.897	Amphiprion_percula
ENSGAFG00000016445	oscp1a	80	71.000	ENSAPEG00000021851	LSM10	78	71.000	Amphiprion_percula
ENSGAFG00000016445	oscp1a	83	70.588	ENSATEG00000006310	oscp1a	76	70.588	Anabas_testudineus
ENSGAFG00000016445	oscp1a	99	53.226	ENSACAG00000001231	LSM10	98	53.226	Anolis_carolinensis
ENSGAFG00000016445	oscp1a	97	58.333	ENSANAG00000018759	-	95	58.333	Aotus_nancymaae
ENSGAFG00000016445	oscp1a	97	56.667	ENSANAG00000031489	-	96	56.667	Aotus_nancymaae
ENSGAFG00000016445	oscp1a	87	71.028	ENSACLG00000004728	oscp1a	87	71.028	Astatotilapia_calliptera
ENSGAFG00000016445	oscp1a	97	62.185	ENSAMXG00000025301	oscp1a	96	62.185	Astyanax_mexicanus
ENSGAFG00000016445	oscp1a	98	57.258	ENSBTAG00000024096	LSM10	99	57.258	Bos_taurus
ENSGAFG00000016445	oscp1a	97	58.333	ENSCJAG00000044880	LSM10	95	58.333	Callithrix_jacchus
ENSGAFG00000016445	oscp1a	93	61.739	ENSCAFG00000003382	LSM10	91	61.739	Canis_familiaris
ENSGAFG00000016445	oscp1a	93	61.739	ENSCAFG00020008920	LSM10	91	61.739	Canis_lupus_dingo
ENSGAFG00000016445	oscp1a	98	57.258	ENSCHIG00000009398	LSM10	99	57.258	Capra_hircus
ENSGAFG00000016445	oscp1a	93	60.000	ENSCAPG00000012567	LSM10	91	60.000	Cavia_aperea
ENSGAFG00000016445	oscp1a	93	60.000	ENSCPOG00000039302	LSM10	91	60.000	Cavia_porcellus
ENSGAFG00000016445	oscp1a	97	55.833	ENSCCAG00000008378	-	95	55.833	Cebus_capucinus
ENSGAFG00000016445	oscp1a	97	58.333	ENSCCAG00000018913	-	95	58.333	Cebus_capucinus
ENSGAFG00000016445	oscp1a	94	59.322	ENSCATG00000006589	LSM10	93	59.322	Cercocebus_atys
ENSGAFG00000016445	oscp1a	93	60.000	ENSCLAG00000008633	LSM10	91	60.000	Chinchilla_lanigera
ENSGAFG00000016445	oscp1a	94	59.322	ENSCSAG00000000134	LSM10	93	59.322	Chlorocebus_sabaeus
ENSGAFG00000016445	oscp1a	84	60.000	ENSCHOG00000008615	LSM10	84	60.000	Choloepus_hoffmanni
ENSGAFG00000016445	oscp1a	72	31.818	ENSCSAVG00000001896	-	75	31.818	Ciona_savignyi
ENSGAFG00000016445	oscp1a	94	59.322	ENSCANG00000019928	LSM10	93	59.322	Colobus_angolensis_palliatus
ENSGAFG00000016445	oscp1a	94	61.017	ENSCGRG00001004317	-	94	61.017	Cricetulus_griseus_chok1gshd
ENSGAFG00000016445	oscp1a	89	57.143	ENSCGRG00001022673	-	91	57.143	Cricetulus_griseus_chok1gshd
ENSGAFG00000016445	oscp1a	94	61.017	ENSCGRG00000014935	-	94	61.017	Cricetulus_griseus_crigri
ENSGAFG00000016445	oscp1a	89	57.143	ENSCGRG00000015514	-	91	57.143	Cricetulus_griseus_crigri
ENSGAFG00000016445	oscp1a	88	70.370	ENSCSEG00000010374	oscp1a	72	70.370	Cynoglossus_semilaevis
ENSGAFG00000016445	oscp1a	85	69.524	ENSCVAG00000001536	oscp1a	79	69.524	Cyprinodon_variegatus
ENSGAFG00000016445	oscp1a	97	63.333	ENSDARG00000101222	oscp1a	98	63.333	Danio_rerio
ENSGAFG00000016445	oscp1a	69	61.628	ENSDARG00000109563	CABZ01074453.1	98	61.628	Danio_rerio
ENSGAFG00000016445	oscp1a	93	60.870	ENSDNOG00000036662	LSM10	91	60.870	Dasypus_novemcinctus
ENSGAFG00000016445	oscp1a	94	60.169	ENSDORG00000007579	Lsm10	93	60.169	Dipodomys_ordii
ENSGAFG00000016445	oscp1a	95	58.824	ENSETEG00000005703	LSM10	94	58.824	Echinops_telfairi
ENSGAFG00000016445	oscp1a	84	51.456	ENSEBUG00000001312	oscp1a	84	51.456	Eptatretus_burgeri
ENSGAFG00000016445	oscp1a	93	60.870	ENSEASG00005012194	LSM10	91	60.870	Equus_asinus_asinus
ENSGAFG00000016445	oscp1a	93	60.870	ENSECAG00000005071	LSM10	91	60.870	Equus_caballus
ENSGAFG00000016445	oscp1a	93	62.609	ENSEEUG00000012032	LSM10	91	62.609	Erinaceus_europaeus
ENSGAFG00000016445	oscp1a	99	65.041	ENSELUG00000007452	oscp1a	99	65.041	Esox_lucius
ENSGAFG00000016445	oscp1a	95	61.345	ENSFALG00000000851	LSM10	94	61.345	Ficedula_albicollis
ENSGAFG00000016445	oscp1a	93	60.870	ENSFDAG00000021056	LSM10	91	60.870	Fukomys_damarensis
ENSGAFG00000016445	oscp1a	87	75.000	ENSFHEG00000001058	oscp1a	93	75.000	Fundulus_heteroclitus
ENSGAFG00000016445	oscp1a	87	62.617	ENSGMOG00000019832	oscp1a	90	62.617	Gadus_morhua
ENSGAFG00000016445	oscp1a	97	60.331	ENSGALG00000002127	LSM10	96	60.331	Gallus_gallus
ENSGAFG00000016445	oscp1a	87	71.963	ENSGACG00000002329	oscp1a	88	71.963	Gasterosteus_aculeatus
ENSGAFG00000016445	oscp1a	95	58.824	ENSGAGG00000024848	LSM10	94	58.824	Gopherus_agassizii
ENSGAFG00000016445	oscp1a	85	60.550	ENSGGOG00000003556	LSM10	89	60.550	Gorilla_gorilla
ENSGAFG00000016445	oscp1a	87	71.963	ENSHBUG00000001722	oscp1a	87	71.963	Haplochromis_burtoni
ENSGAFG00000016445	oscp1a	93	58.261	ENSHGLG00000011625	LSM10	91	58.261	Heterocephalus_glaber_female
ENSGAFG00000016445	oscp1a	93	58.261	ENSHGLG00100001769	LSM10	91	58.261	Heterocephalus_glaber_male
ENSGAFG00000016445	oscp1a	77	72.632	ENSIPUG00000005808	oscp1a	83	72.632	Ictalurus_punctatus
ENSGAFG00000016445	oscp1a	93	60.870	ENSSTOG00000000606	LSM10	91	60.870	Ictidomys_tridecemlineatus
ENSGAFG00000016445	oscp1a	87	74.766	ENSKMAG00000012143	oscp1a	88	74.766	Kryptolebias_marmoratus
ENSGAFG00000016445	oscp1a	98	64.167	ENSLBEG00000017764	oscp1a	96	64.167	Labrus_bergylta
ENSGAFG00000016445	oscp1a	84	57.282	ENSLACG00000015904	LSM10	79	57.282	Latimeria_chalumnae
ENSGAFG00000016445	oscp1a	87	66.355	ENSLOCG00000018277	oscp1a	88	66.355	Lepisosteus_oculatus
ENSGAFG00000016445	oscp1a	96	59.167	ENSLAFG00000009600	LSM10	95	59.167	Loxodonta_africana
ENSGAFG00000016445	oscp1a	94	59.322	ENSMFAG00000009115	LSM10	93	59.322	Macaca_fascicularis
ENSGAFG00000016445	oscp1a	94	59.322	ENSMMUG00000017338	LSM10	93	59.322	Macaca_mulatta
ENSGAFG00000016445	oscp1a	94	59.322	ENSMNEG00000020023	LSM10	93	59.322	Macaca_nemestrina
ENSGAFG00000016445	oscp1a	94	59.322	ENSMLEG00000025150	LSM10	93	59.322	Mandrillus_leucophaeus
ENSGAFG00000016445	oscp1a	87	68.224	ENSMAMG00000004427	oscp1a	88	68.224	Mastacembelus_armatus
ENSGAFG00000016445	oscp1a	87	71.028	ENSMZEG00005026307	oscp1a	87	71.028	Maylandia_zebra
ENSGAFG00000016445	oscp1a	97	59.504	ENSMGAG00000015707	LSM10	96	59.504	Meleagris_gallopavo
ENSGAFG00000016445	oscp1a	96	60.833	ENSMAUG00000016624	Lsm10	96	60.833	Mesocricetus_auratus
ENSGAFG00000016445	oscp1a	96	60.833	ENSMOCG00000021943	Lsm10	96	60.833	Microtus_ochrogaster
ENSGAFG00000016445	oscp1a	83	74.510	ENSMMOG00000013597	oscp1a	76	74.510	Mola_mola
ENSGAFG00000016445	oscp1a	95	61.345	ENSMODG00000023328	LSM10	94	61.345	Monodelphis_domestica
ENSGAFG00000016445	oscp1a	96	60.000	MGP_CAROLIEiJ_G0026467	Lsm10	98	59.574	Mus_caroli
ENSGAFG00000016445	oscp1a	96	60.000	ENSMUSG00000050188	Lsm10	98	59.574	Mus_musculus
ENSGAFG00000016445	oscp1a	96	60.000	MGP_PahariEiJ_G0028798	Lsm10	98	59.574	Mus_pahari
ENSGAFG00000016445	oscp1a	96	60.000	MGP_SPRETEiJ_G0027446	Lsm10	98	59.574	Mus_spretus
ENSGAFG00000016445	oscp1a	93	61.739	ENSMPUG00000018593	LSM10	91	61.739	Mustela_putorius_furo
ENSGAFG00000016445	oscp1a	93	61.739	ENSMLUG00000023895	LSM10	91	61.739	Myotis_lucifugus
ENSGAFG00000016445	oscp1a	94	59.322	ENSNGAG00000015011	Lsm10	93	59.322	Nannospalax_galili
ENSGAFG00000016445	oscp1a	87	71.028	ENSNBRG00000014306	oscp1a	87	71.028	Neolamprologus_brichardi
ENSGAFG00000016445	oscp1a	95	57.851	ENSNLEG00000033754	LSM10	96	57.851	Nomascus_leucogenys
ENSGAFG00000016445	oscp1a	95	61.345	ENSMEUG00000006313	LSM10	94	61.345	Notamacropus_eugenii
ENSGAFG00000016445	oscp1a	94	61.017	ENSOPRG00000001699	LSM10	93	61.017	Ochotona_princeps
ENSGAFG00000016445	oscp1a	93	60.000	ENSODEG00000019161	LSM10	91	60.000	Octodon_degus
ENSGAFG00000016445	oscp1a	87	71.028	ENSONIG00000020904	oscp1a	88	71.028	Oreochromis_niloticus
ENSGAFG00000016445	oscp1a	96	59.167	ENSOANG00000002066	LSM10	95	59.167	Ornithorhynchus_anatinus
ENSGAFG00000016445	oscp1a	93	60.000	ENSOCUG00000005333	LSM10	91	60.000	Oryctolagus_cuniculus
ENSGAFG00000016445	oscp1a	84	69.903	ENSORLG00000009504	oscp1a	85	69.903	Oryzias_latipes
ENSGAFG00000016445	oscp1a	84	69.903	ENSORLG00020016201	oscp1a	85	69.903	Oryzias_latipes_hni
ENSGAFG00000016445	oscp1a	84	68.932	ENSORLG00015007794	oscp1a	85	68.932	Oryzias_latipes_hsok
ENSGAFG00000016445	oscp1a	93	60.870	ENSOGAG00000002653	LSM10	91	60.870	Otolemur_garnettii
ENSGAFG00000016445	oscp1a	98	57.258	ENSOARG00000009596	LSM10	99	57.258	Ovis_aries
ENSGAFG00000016445	oscp1a	85	60.550	ENSPPAG00000023465	LSM10	89	60.550	Pan_paniscus
ENSGAFG00000016445	oscp1a	93	60.870	ENSPPRG00000014619	LSM10	91	60.870	Panthera_pardus
ENSGAFG00000016445	oscp1a	93	60.870	ENSPTIG00000004613	LSM10	91	60.870	Panthera_tigris_altaica
ENSGAFG00000016445	oscp1a	85	60.550	ENSPTRG00000000539	LSM10	89	60.550	Pan_troglodytes
ENSGAFG00000016445	oscp1a	94	59.322	ENSPANG00000023172	LSM10	93	59.322	Papio_anubis
ENSGAFG00000016445	oscp1a	87	69.159	ENSPKIG00000003728	oscp1a	86	69.159	Paramormyrops_kingsleyae
ENSGAFG00000016445	oscp1a	95	57.983	ENSPSIG00000000590	LSM10	94	57.983	Pelodiscus_sinensis
ENSGAFG00000016445	oscp1a	52	71.875	ENSPMGG00000015718	oscp1a	83	71.875	Periophthalmus_magnuspinnatus
ENSGAFG00000016445	oscp1a	84	58.095	ENSPCIG00000014865	LSM10	75	58.095	Phascolarctos_cinereus
ENSGAFG00000016445	oscp1a	85	89.524	ENSPFOG00000020490	oscp1a	89	89.524	Poecilia_formosa
ENSGAFG00000016445	oscp1a	87	88.785	ENSPLAG00000016537	oscp1a	82	88.785	Poecilia_latipinna
ENSGAFG00000016445	oscp1a	92	85.965	ENSPMEG00000000174	oscp1a	99	85.965	Poecilia_mexicana
ENSGAFG00000016445	oscp1a	87	92.523	ENSPREG00000009899	oscp1a	82	92.523	Poecilia_reticulata
ENSGAFG00000016445	oscp1a	85	60.550	ENSPPYG00000001539	LSM10	89	60.550	Pongo_abelii
ENSGAFG00000016445	oscp1a	98	59.836	ENSPCAG00000002520	LSM10	98	59.836	Procavia_capensis
ENSGAFG00000016445	oscp1a	93	60.870	ENSPVAG00000008644	LSM10	91	60.870	Pteropus_vampyrus
ENSGAFG00000016445	oscp1a	87	71.963	ENSPNYG00000003138	oscp1a	87	71.963	Pundamilia_nyererei
ENSGAFG00000016445	oscp1a	86	67.925	ENSPNAG00000028829	oscp1a	88	67.925	Pygocentrus_nattereri
ENSGAFG00000016445	oscp1a	96	59.167	ENSRNOG00000025716	Lsm10	96	59.167	Rattus_norvegicus
ENSGAFG00000016445	oscp1a	94	59.322	ENSRBIG00000001561	LSM10	93	59.322	Rhinopithecus_bieti
ENSGAFG00000016445	oscp1a	94	59.322	ENSRROG00000011414	LSM10	93	59.322	Rhinopithecus_roxellana
ENSGAFG00000016445	oscp1a	97	58.333	ENSSBOG00000036413	-	95	58.333	Saimiri_boliviensis_boliviensis
ENSGAFG00000016445	oscp1a	95	61.345	ENSSHAG00000018056	LSM10	94	61.345	Sarcophilus_harrisii
ENSGAFG00000016445	oscp1a	78	68.750	ENSSFOG00015019954	lsm10	89	69.444	Scleropages_formosus
ENSGAFG00000016445	oscp1a	87	72.897	ENSSMAG00000001297	oscp1a	91	72.897	Scophthalmus_maximus
ENSGAFG00000016445	oscp1a	85	66.667	ENSSDUG00000007090	oscp1a	85	66.667	Seriola_dumerili
ENSGAFG00000016445	oscp1a	85	65.714	ENSSLDG00000000800	oscp1a	87	65.714	Seriola_lalandi_dorsalis
ENSGAFG00000016445	oscp1a	85	60.000	ENSSARG00000004211	LSM10	91	60.684	Sorex_araneus
ENSGAFG00000016445	oscp1a	87	73.832	ENSSPAG00000009229	oscp1a	88	73.832	Stegastes_partitus
ENSGAFG00000016445	oscp1a	97	59.167	ENSSSCG00000038916	LSM10	95	59.167	Sus_scrofa
ENSGAFG00000016445	oscp1a	95	61.345	ENSTGUG00000001600	-	95	61.345	Taeniopygia_guttata
ENSGAFG00000016445	oscp1a	95	62.185	ENSTGUG00000001602	-	95	62.185	Taeniopygia_guttata
ENSGAFG00000016445	oscp1a	88	69.444	ENSTRUG00000010531	oscp1a	87	69.444	Takifugu_rubripes
ENSGAFG00000016445	oscp1a	98	58.537	ENSTBEG00000016674	LSM10	98	58.537	Tupaia_belangeri
ENSGAFG00000016445	oscp1a	93	61.739	ENSUAMG00000020265	LSM10	91	61.739	Ursus_americanus
ENSGAFG00000016445	oscp1a	93	61.739	ENSUMAG00000001438	LSM10	52	61.739	Ursus_maritimus
ENSGAFG00000016445	oscp1a	93	61.739	ENSVVUG00000023209	LSM10	91	61.739	Vulpes_vulpes
ENSGAFG00000016445	oscp1a	97	55.372	ENSXETG00000027631	lsm10	96	55.372	Xenopus_tropicalis
ENSGAFG00000016445	oscp1a	84	94.175	ENSXCOG00000018776	oscp1a	64	95.098	Xiphophorus_couchianus
ENSGAFG00000016445	oscp1a	88	95.370	ENSXMAG00000019963	oscp1a	86	95.370	Xiphophorus_maculatus