EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSGAFG00000016488 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 1626 bases
Position: chrNHOQ01002284.1:65675-67300
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024448	RNA_pol_Rpb2_7	PF04560.20	2.5e-26	1	1
ENSGAFP00000024448	RNA_pol_Rpb2_6	PF00562.28	3.3e-73	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024703	-	873	-	ENSGAFP00000024448	290 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016488's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016488's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016488	-	63	48.259	ENSCING00000023381	-	97	48.259	Ciona_intestinalis
ENSGAFG00000016488	-	99	40.303	ENSHBUG00000008882	polr3b	95	40.303	Haplochromis_burtoni
ENSGAFG00000016488	-	99	76.647	ENSMICG00000015166	POLR2B	66	76.647	Microcebus_murinus
ENSGAFG00000016488	-	99	44.848	ENSOMEG00000010619	polr3b	95	44.848	Oryzias_melastigma
ENSGAFG00000016488	-	99	45.152	ENSPMGG00000013671	polr3b	95	45.152	Periophthalmus_magnuspinnatus
ENSGAFG00000016488	-	99	46.483	ENSPMAG00000008197	-	67	46.483	Petromyzon_marinus
ENSGAFG00000016488	-	99	67.365	ENSPCOG00000009281	-	73	67.365	Propithecus_coquereli
ENSGAFG00000016488	-	99	79.641	ENSRBIG00000042838	POLR2B	67	79.641	Rhinopithecus_bieti
ENSGAFG00000016488	-	99	79.341	ENSSPUG00000018295	POLR2B	67	79.341	Sphenodon_punctatus
ENSGAFG00000016488	-	99	46.319	ENSSPUG00000004905	-	94	46.319	Sphenodon_punctatus
ENSGAFG00000016488	-	100	82.090	ENSSPAG00000019229	-	67	82.090	Stegastes_partitus
ENSGAFG00000016488	-	99	46.933	ENSSPAG00000008909	polr3b	95	46.933	Stegastes_partitus
ENSGAFG00000016488	-	99	79.641	ENSUAMG00000003345	-	75	79.641	Ursus_americanus
ENSGAFG00000016488	-	99	46.061	ENSUAMG00000024267	POLR3B	51	46.061	Ursus_americanus
ENSGAFG00000016488	-	100	98.966	ENSXCOG00000014654	-	100	98.966	Xiphophorus_couchianus