EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016566 (Gene tree)
Gene ID: -
Gene Symbol: RBPMS
Alias: HERMES
Full Name: RNA binding protein%2C mRNA processing factor
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Minus strand
Length: 43546 bases
Position: chrNHOQ01001086.1:4623008-4666553
Accession: 19097
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024558	RRM_1	PF00076.22	2.8e-11	1	1
ENSGAFP00000024551	RRM_1	PF00076.22	3.9e-11	1	1
ENSGAFP00000024548	RRM_1	PF00076.22	4e-11	1	1
ENSGAFP00000024564	RRM_1	PF00076.22	7.3e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024819	RBPMS-204	606	-	ENSGAFP00000024564	201 (aa)	-	-
ENSGAFT00000024803	RBPMS-201	1354	-	ENSGAFP00000024548	241 (aa)	-	-
ENSGAFT00000024813	RBPMS-203	1338	-	ENSGAFP00000024558	194 (aa)	-	UPI0003B72139
ENSGAFT00000024806	RBPMS-202	1065	-	ENSGAFP00000024551	232 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016566's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016566's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016566	RBPMS	77	64.968	ENSGAFG00000002978	rbpms2b	84	67.516

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016566	RBPMS	99	84.536	ENSG00000157110	RBPMS	99	84.536	Homo_sapiens
ENSGAFG00000016566	RBPMS	100	99.485	ENSAPOG00000022304	RBPMS	100	99.485	Acanthochromis_polyacanthus
ENSGAFG00000016566	RBPMS	89	81.143	ENSAMEG00000001522	RBPMS	81	80.226	Ailuropoda_melanoleuca
ENSGAFG00000016566	RBPMS	62	95.000	ENSACIG00000011395	RBPMS	61	99.123	Amphilophus_citrinellus
ENSGAFG00000016566	RBPMS	100	99.485	ENSAOCG00000007731	RBPMS	100	99.485	Amphiprion_ocellaris
ENSGAFG00000016566	RBPMS	100	99.485	ENSAPEG00000023543	RBPMS	100	99.485	Amphiprion_percula
ENSGAFG00000016566	RBPMS	100	99.485	ENSATEG00000018184	RBPMS	100	99.485	Anabas_testudineus
ENSGAFG00000016566	RBPMS	100	83.163	ENSACAG00000003012	RBPMS	100	81.633	Anolis_carolinensis
ENSGAFG00000016566	RBPMS	99	84.536	ENSANAG00000028150	RBPMS	99	84.536	Aotus_nancymaae
ENSGAFG00000016566	RBPMS	100	98.969	ENSACLG00000002926	RBPMS	100	98.969	Astatotilapia_calliptera
ENSGAFG00000016566	RBPMS	99	92.708	ENSAMXG00000033491	rbpms	99	92.708	Astyanax_mexicanus
ENSGAFG00000016566	RBPMS	99	83.505	ENSBTAG00000033727	RBPMS	81	84.181	Bos_taurus
ENSGAFG00000016566	RBPMS	99	84.536	ENSCJAG00000012366	RBPMS	99	84.536	Callithrix_jacchus
ENSGAFG00000016566	RBPMS	90	85.311	ENSCAFG00000006503	RBPMS	81	85.311	Canis_familiaris
ENSGAFG00000016566	RBPMS	90	85.311	ENSCAFG00020001031	RBPMS	81	85.311	Canis_lupus_dingo
ENSGAFG00000016566	RBPMS	100	78.173	ENSCHIG00000027156	RBPMS	100	78.173	Capra_hircus
ENSGAFG00000016566	RBPMS	57	90.000	ENSTSYG00000013982	RBPMS	83	90.000	Carlito_syrichta
ENSGAFG00000016566	RBPMS	99	84.021	ENSCPOG00000038597	RBPMS	99	84.021	Cavia_porcellus
ENSGAFG00000016566	RBPMS	99	84.536	ENSCCAG00000033226	RBPMS	99	84.536	Cebus_capucinus
ENSGAFG00000016566	RBPMS	99	84.536	ENSCATG00000036486	RBPMS	99	84.536	Cercocebus_atys
ENSGAFG00000016566	RBPMS	89	87.931	ENSCLAG00000001518	RBPMS	100	87.931	Chinchilla_lanigera
ENSGAFG00000016566	RBPMS	90	85.311	ENSCSAG00000015838	RBPMS	81	85.311	Chlorocebus_sabaeus
ENSGAFG00000016566	RBPMS	79	89.032	ENSCHOG00000008745	RBPMS	79	89.032	Choloepus_hoffmanni
ENSGAFG00000016566	RBPMS	100	81.538	ENSCPBG00000013437	RBPMS	100	81.538	Chrysemys_picta_bellii
ENSGAFG00000016566	RBPMS	89	87.931	ENSCANG00000034997	RBPMS	100	87.931	Colobus_angolensis_palliatus
ENSGAFG00000016566	RBPMS	99	79.487	ENSCGRG00001002814	Rbpms	99	83.590	Cricetulus_griseus_chok1gshd
ENSGAFG00000016566	RBPMS	89	82.857	ENSCGRG00000006095	Rbpms	100	87.429	Cricetulus_griseus_crigri
ENSGAFG00000016566	RBPMS	100	97.938	ENSCSEG00000002777	rbpms	100	97.938	Cynoglossus_semilaevis
ENSGAFG00000016566	RBPMS	100	99.485	ENSCVAG00000013975	RBPMS	100	99.485	Cyprinodon_variegatus
ENSGAFG00000016566	RBPMS	87	71.598	ENSDARG00000099396	rbpms	100	71.598	Danio_rerio
ENSGAFG00000016566	RBPMS	90	84.746	ENSDNOG00000008126	RBPMS	81	84.746	Dasypus_novemcinctus
ENSGAFG00000016566	RBPMS	90	85.876	ENSETEG00000017582	RBPMS	81	85.876	Echinops_telfairi
ENSGAFG00000016566	RBPMS	79	89.032	ENSEASG00005016962	RBPMS	78	89.032	Equus_asinus_asinus
ENSGAFG00000016566	RBPMS	90	84.746	ENSECAG00000020735	RBPMS	78	89.032	Equus_caballus
ENSGAFG00000016566	RBPMS	100	93.814	ENSELUG00000009787	rbpms	100	93.814	Esox_lucius
ENSGAFG00000016566	RBPMS	99	84.021	ENSFCAG00000025639	-	99	84.021	Felis_catus
ENSGAFG00000016566	RBPMS	88	52.907	ENSFCAG00000022292	-	93	47.959	Felis_catus
ENSGAFG00000016566	RBPMS	89	87.931	ENSFDAG00000012078	RBPMS	100	87.931	Fukomys_damarensis
ENSGAFG00000016566	RBPMS	100	98.969	ENSFHEG00000000618	rbpms	100	98.969	Fundulus_heteroclitus
ENSGAFG00000016566	RBPMS	77	61.333	ENSGMOG00000009646	-	100	61.333	Gadus_morhua
ENSGAFG00000016566	RBPMS	100	88.144	ENSGACG00000019471	rbpms	100	88.144	Gasterosteus_aculeatus
ENSGAFG00000016566	RBPMS	59	86.087	ENSGAGG00000023634	RBPMS	59	77.372	Gopherus_agassizii
ENSGAFG00000016566	RBPMS	100	98.969	ENSHBUG00000005888	RBPMS	100	98.969	Haplochromis_burtoni
ENSGAFG00000016566	RBPMS	99	84.536	ENSHGLG00000002303	RBPMS	99	84.536	Heterocephalus_glaber_female
ENSGAFG00000016566	RBPMS	89	87.931	ENSHGLG00100008787	RBPMS	100	87.931	Heterocephalus_glaber_male
ENSGAFG00000016566	RBPMS	98	96.859	ENSHCOG00000005774	rbpms	99	96.859	Hippocampus_comes
ENSGAFG00000016566	RBPMS	97	89.418	ENSIPUG00000012459	RBPMS	98	89.418	Ictalurus_punctatus
ENSGAFG00000016566	RBPMS	99	84.021	ENSSTOG00000026546	RBPMS	99	84.021	Ictidomys_tridecemlineatus
ENSGAFG00000016566	RBPMS	99	84.536	ENSJJAG00000014024	Rbpms	99	84.536	Jaculus_jaculus
ENSGAFG00000016566	RBPMS	89	78.286	ENSKMAG00000006377	RBPMS	88	81.143	Kryptolebias_marmoratus
ENSGAFG00000016566	RBPMS	100	99.485	ENSLBEG00000027989	RBPMS	100	99.485	Labrus_bergylta
ENSGAFG00000016566	RBPMS	90	92.000	ENSLOCG00000013199	RBPMS	96	92.000	Lepisosteus_oculatus
ENSGAFG00000016566	RBPMS	90	85.311	ENSLAFG00000000209	RBPMS	81	85.311	Loxodonta_africana
ENSGAFG00000016566	RBPMS	99	84.536	ENSMFAG00000036911	RBPMS	99	84.536	Macaca_fascicularis
ENSGAFG00000016566	RBPMS	99	84.536	ENSMMUG00000000458	RBPMS	99	84.536	Macaca_mulatta
ENSGAFG00000016566	RBPMS	99	84.536	ENSMNEG00000043805	RBPMS	99	84.536	Macaca_nemestrina
ENSGAFG00000016566	RBPMS	89	87.931	ENSMLEG00000015635	RBPMS	100	87.931	Mandrillus_leucophaeus
ENSGAFG00000016566	RBPMS	95	77.838	ENSMAMG00000004604	RBPMS	94	77.838	Mastacembelus_armatus
ENSGAFG00000016566	RBPMS	100	98.969	ENSMZEG00005000698	RBPMS	100	98.969	Maylandia_zebra
ENSGAFG00000016566	RBPMS	90	85.143	ENSMGAG00000005088	RBPMS	90	85.143	Meleagris_gallopavo
ENSGAFG00000016566	RBPMS	99	79.487	ENSMAUG00000018892	Rbpms	99	83.590	Mesocricetus_auratus
ENSGAFG00000016566	RBPMS	99	80.412	ENSMICG00000001295	RBPMS	99	84.021	Microcebus_murinus
ENSGAFG00000016566	RBPMS	99	79.487	ENSMOCG00000014009	Rbpms	99	83.590	Microtus_ochrogaster
ENSGAFG00000016566	RBPMS	82	95.597	ENSMMOG00000012036	RBPMS	67	95.597	Mola_mola
ENSGAFG00000016566	RBPMS	97	84.127	ENSMODG00000019006	RBPMS	89	84.127	Monodelphis_domestica
ENSGAFG00000016566	RBPMS	100	97.423	ENSMALG00000003261	RBPMS	100	97.423	Monopterus_albus
ENSGAFG00000016566	RBPMS	99	78.974	MGP_CAROLIEiJ_G0030970	Rbpms	99	83.077	Mus_caroli
ENSGAFG00000016566	RBPMS	99	78.974	ENSMUSG00000031586	Rbpms	99	83.077	Mus_musculus
ENSGAFG00000016566	RBPMS	99	78.974	MGP_PahariEiJ_G0021439	Rbpms	99	83.077	Mus_pahari
ENSGAFG00000016566	RBPMS	99	78.974	MGP_SPRETEiJ_G0032087	Rbpms	99	83.077	Mus_spretus
ENSGAFG00000016566	RBPMS	89	81.143	ENSMPUG00000011314	RBPMS	81	80.226	Mustela_putorius_furo
ENSGAFG00000016566	RBPMS	100	84.694	ENSMLUG00000009391	RBPMS	100	86.076	Myotis_lucifugus
ENSGAFG00000016566	RBPMS	90	85.311	ENSNGAG00000011141	Rbpms	81	85.311	Nannospalax_galili
ENSGAFG00000016566	RBPMS	90	99.425	ENSNBRG00000003313	RBPMS	97	99.425	Neolamprologus_brichardi
ENSGAFG00000016566	RBPMS	99	84.536	ENSNLEG00000036183	-	99	84.536	Nomascus_leucogenys
ENSGAFG00000016566	RBPMS	68	84.848	ENSOPRG00000013151	RBPMS	60	84.848	Ochotona_princeps
ENSGAFG00000016566	RBPMS	99	84.536	ENSODEG00000006700	RBPMS	99	84.536	Octodon_degus
ENSGAFG00000016566	RBPMS	90	99.425	ENSONIG00000007546	RBPMS	100	99.425	Oreochromis_niloticus
ENSGAFG00000016566	RBPMS	90	85.311	ENSOCUG00000008572	RBPMS	81	85.311	Oryctolagus_cuniculus
ENSGAFG00000016566	RBPMS	100	97.938	ENSORLG00000004135	-	100	97.938	Oryzias_latipes
ENSGAFG00000016566	RBPMS	100	97.938	ENSORLG00020016179	RBPMS	100	97.938	Oryzias_latipes_hni
ENSGAFG00000016566	RBPMS	100	97.938	ENSORLG00015013770	RBPMS	100	97.938	Oryzias_latipes_hsok
ENSGAFG00000016566	RBPMS	100	98.969	ENSOMEG00000005044	RBPMS	100	98.969	Oryzias_melastigma
ENSGAFG00000016566	RBPMS	92	83.978	ENSOGAG00000030298	RBPMS	81	83.978	Otolemur_garnettii
ENSGAFG00000016566	RBPMS	65	84.252	ENSOARG00000010366	RBPMS	89	84.252	Ovis_aries
ENSGAFG00000016566	RBPMS	89	87.931	ENSPPAG00000033108	RBPMS	100	87.931	Pan_paniscus
ENSGAFG00000016566	RBPMS	99	84.021	ENSPPRG00000004836	RBPMS	99	84.021	Panthera_pardus
ENSGAFG00000016566	RBPMS	89	87.931	ENSPTIG00000015964	RBPMS	89	87.931	Panthera_tigris_altaica
ENSGAFG00000016566	RBPMS	99	84.536	ENSPTRG00000020135	RBPMS	99	84.536	Pan_troglodytes
ENSGAFG00000016566	RBPMS	99	84.536	ENSPANG00000008143	RBPMS	99	84.536	Papio_anubis
ENSGAFG00000016566	RBPMS	97	88.360	ENSPKIG00000004836	rbpms	100	88.360	Paramormyrops_kingsleyae
ENSGAFG00000016566	RBPMS	100	91.237	ENSPKIG00000000535	-	100	91.237	Paramormyrops_kingsleyae
ENSGAFG00000016566	RBPMS	89	86.207	ENSPSIG00000006136	RBPMS	99	86.207	Pelodiscus_sinensis
ENSGAFG00000016566	RBPMS	81	97.468	ENSPMGG00000018012	RBPMS	74	97.468	Periophthalmus_magnuspinnatus
ENSGAFG00000016566	RBPMS	99	79.592	ENSPEMG00000021130	Rbpms	99	83.163	Peromyscus_maniculatus_bairdii
ENSGAFG00000016566	RBPMS	90	86.932	ENSPCIG00000019298	-	71	83.041	Phascolarctos_cinereus
ENSGAFG00000016566	RBPMS	100	100.000	ENSPFOG00000017158	RBPMS	100	100.000	Poecilia_formosa
ENSGAFG00000016566	RBPMS	100	100.000	ENSPLAG00000010767	RBPMS	100	100.000	Poecilia_latipinna
ENSGAFG00000016566	RBPMS	100	100.000	ENSPMEG00000009788	RBPMS	100	100.000	Poecilia_mexicana
ENSGAFG00000016566	RBPMS	100	100.000	ENSPREG00000016959	RBPMS	100	100.000	Poecilia_reticulata
ENSGAFG00000016566	RBPMS	90	85.311	ENSPPYG00000018487	RBPMS	92	78.846	Pongo_abelii
ENSGAFG00000016566	RBPMS	57	90.000	ENSPCAG00000013493	-	100	90.000	Procavia_capensis
ENSGAFG00000016566	RBPMS	92	69.613	ENSPCOG00000015948	RBPMS	87	70.621	Propithecus_coquereli
ENSGAFG00000016566	RBPMS	90	84.746	ENSPVAG00000001661	RBPMS	81	84.746	Pteropus_vampyrus
ENSGAFG00000016566	RBPMS	100	98.969	ENSPNYG00000001172	RBPMS	100	98.969	Pundamilia_nyererei
ENSGAFG00000016566	RBPMS	99	96.354	ENSPNAG00000029160	RBPMS	99	96.354	Pygocentrus_nattereri
ENSGAFG00000016566	RBPMS	92	78.571	ENSRNOG00000013328	Rbpms	88	82.967	Rattus_norvegicus
ENSGAFG00000016566	RBPMS	89	87.931	ENSRBIG00000038218	RBPMS	100	87.931	Rhinopithecus_bieti
ENSGAFG00000016566	RBPMS	99	84.536	ENSRROG00000042518	RBPMS	99	84.536	Rhinopithecus_roxellana
ENSGAFG00000016566	RBPMS	99	84.021	ENSSBOG00000026670	RBPMS	99	84.021	Saimiri_boliviensis_boliviensis
ENSGAFG00000016566	RBPMS	91	86.517	ENSSHAG00000010114	RBPMS	92	86.517	Sarcophilus_harrisii
ENSGAFG00000016566	RBPMS	90	89.655	ENSSFOG00015017481	-	100	86.243	Scleropages_formosus
ENSGAFG00000016566	RBPMS	100	90.206	ENSSFOG00015000417	rbpms	100	90.206	Scleropages_formosus
ENSGAFG00000016566	RBPMS	100	96.392	ENSSMAG00000010871	rbpms	100	96.392	Scophthalmus_maximus
ENSGAFG00000016566	RBPMS	100	100.000	ENSSDUG00000010894	RBPMS	100	100.000	Seriola_dumerili
ENSGAFG00000016566	RBPMS	100	100.000	ENSSLDG00000012916	RBPMS	100	100.000	Seriola_lalandi_dorsalis
ENSGAFG00000016566	RBPMS	90	80.791	ENSSARG00000000274	RBPMS	81	80.791	Sorex_araneus
ENSGAFG00000016566	RBPMS	94	83.060	ENSSPUG00000017525	RBPMS	70	83.060	Sphenodon_punctatus
ENSGAFG00000016566	RBPMS	89	77.457	ENSSPAG00000004777	rbpms	95	95.484	Stegastes_partitus
ENSGAFG00000016566	RBPMS	99	84.021	ENSSSCG00000015846	RBPMS	99	84.021	Sus_scrofa
ENSGAFG00000016566	RBPMS	97	82.011	ENSTGUG00000001776	RBPMS	99	82.011	Taeniopygia_guttata
ENSGAFG00000016566	RBPMS	100	97.423	ENSTRUG00000000041	RBPMS	100	97.423	Takifugu_rubripes
ENSGAFG00000016566	RBPMS	90	84.659	ENSTTRG00000012451	RBPMS	81	84.659	Tursiops_truncatus
ENSGAFG00000016566	RBPMS	60	86.207	ENSUAMG00000026353	RBPMS	76	87.179	Ursus_americanus
ENSGAFG00000016566	RBPMS	85	86.667	ENSUMAG00000007347	RBPMS	76	88.462	Ursus_maritimus
ENSGAFG00000016566	RBPMS	79	89.032	ENSVPAG00000010991	RBPMS	79	89.032	Vicugna_pacos
ENSGAFG00000016566	RBPMS	99	84.536	ENSVVUG00000019770	RBPMS	99	84.536	Vulpes_vulpes
ENSGAFG00000016566	RBPMS	89	87.931	ENSXETG00000011290	rbpms	100	87.931	Xenopus_tropicalis
ENSGAFG00000016566	RBPMS	90	93.103	ENSXCOG00000002436	RBPMS	91	95.349	Xiphophorus_couchianus
ENSGAFG00000016566	RBPMS	100	100.000	ENSXMAG00000027637	RBPMS	100	100.000	Xiphophorus_maculatus