EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016579 (Gene tree)
Gene ID: -
Gene Symbol: si:ch211-107m4.1
Alias: -
Full Name: si:ch211-107m4.1
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 8067 bases
Position: chrNHOQ01001766.1:1288504-1296570
Accession: ZDB-GENE-081107-3
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024581	SAP	PF02037.27	2.2e-09	1	1
ENSGAFP00000024569	SAP	PF02037.27	2.2e-09	1	1
ENSGAFP00000024574	SAP	PF02037.27	2.3e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024824	-	2105	-	ENSGAFP00000024569	640 (aa)	-	-
ENSGAFT00000024829	-	2150	-	ENSGAFP00000024574	655 (aa)	-	-
ENSGAFT00000024836	-	1908	-	ENSGAFP00000024581	635 (aa)	-	-

Gene Model

Click here to download ENSGAFG00000016579's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016579's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016579	si:ch211-107m4.1	72	35.197	ENSGAFG00000009369	hnrnpub	53	38.565
ENSGAFG00000016579	si:ch211-107m4.1	73	36.345	ENSGAFG00000015786	HNRNPUL1	77	35.858

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016579	si:ch211-107m4.1	71	41.004	ENSG00000214753	HNRNPUL2	66	42.600	Homo_sapiens
ENSGAFG00000016579	si:ch211-107m4.1	99	66.615	ENSAPOG00000005128	si:ch211-107m4.1	99	66.770	Acanthochromis_polyacanthus
ENSGAFG00000016579	si:ch211-107m4.1	97	60.222	ENSACIG00000022729	si:ch211-107m4.1	89	60.222	Amphilophus_citrinellus
ENSGAFG00000016579	si:ch211-107m4.1	99	63.746	ENSAOCG00000017297	si:ch211-107m4.1	99	63.746	Amphiprion_ocellaris
ENSGAFG00000016579	si:ch211-107m4.1	99	62.651	ENSAPEG00000009122	-	99	62.801	Amphiprion_percula
ENSGAFG00000016579	si:ch211-107m4.1	71	39.749	ENSACAG00000000746	-	64	39.252	Anolis_carolinensis
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSANAG00000027153	-	88	35.120	Aotus_nancymaae
ENSGAFG00000016579	si:ch211-107m4.1	99	65.217	ENSACLG00000018069	si:ch211-107m4.1	100	65.217	Astatotilapia_calliptera
ENSGAFG00000016579	si:ch211-107m4.1	99	42.789	ENSAMXG00000033712	si:ch211-107m4.1	96	45.601	Astyanax_mexicanus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSBTAG00000002510	HNRNPUL2	66	42.084	Bos_taurus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSCJAG00000018709	-	87	35.863	Callithrix_jacchus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSCAFG00000015686	-	66	42.084	Canis_familiaris
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSCAFG00020013120	-	66	42.084	Canis_lupus_dingo
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSCHIG00000020213	-	66	42.285	Capra_hircus
ENSGAFG00000016579	si:ch211-107m4.1	71	38.166	ENSCCAG00000037674	-	94	34.894	Cebus_capucinus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSCATG00000034588	-	88	35.120	Cercocebus_atys
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSCSAG00000006701	-	84	35.897	Chlorocebus_sabaeus
ENSGAFG00000016579	si:ch211-107m4.1	71	41.509	ENSCPBG00000017963	-	91	37.500	Chrysemys_picta_bellii
ENSGAFG00000016579	si:ch211-107m4.1	71	39.749	ENSCGRG00001017076	Hnrnpul2	72	37.477	Cricetulus_griseus_chok1gshd
ENSGAFG00000016579	si:ch211-107m4.1	95	56.289	ENSCSEG00000005686	si:ch211-107m4.1	99	58.560	Cynoglossus_semilaevis
ENSGAFG00000016579	si:ch211-107m4.1	100	75.851	ENSCVAG00000006862	si:ch211-107m4.1	100	76.316	Cyprinodon_variegatus
ENSGAFG00000016579	si:ch211-107m4.1	99	40.437	ENSDARG00000056830	si:ch211-107m4.1	99	40.710	Danio_rerio
ENSGAFG00000016579	si:ch211-107m4.1	71	39.958	ENSDNOG00000006508	-	67	41.257	Dasypus_novemcinctus
ENSGAFG00000016579	si:ch211-107m4.1	79	37.859	ENSDORG00000008678	Hnrnpul2	87	35.426	Dipodomys_ordii
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSEASG00005011347	-	67	41.569	Equus_asinus_asinus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	ENSECAG00000020298	-	66	41.683	Equus_caballus
ENSGAFG00000016579	si:ch211-107m4.1	82	69.231	ENSELUG00000008134	si:ch211-107m4.1	99	41.524	Esox_lucius
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSFCAG00000014766	-	66	42.084	Felis_catus
ENSGAFG00000016579	si:ch211-107m4.1	97	77.636	ENSFHEG00000014731	si:ch211-107m4.1	100	77.636	Fundulus_heteroclitus
ENSGAFG00000016579	si:ch211-107m4.1	87	67.892	ENSGACG00000017006	si:ch211-107m4.1	99	57.453	Gasterosteus_aculeatus
ENSGAFG00000016579	si:ch211-107m4.1	71	41.509	ENSGAGG00000016818	-	88	37.803	Gopherus_agassizii
ENSGAFG00000016579	si:ch211-107m4.1	71	41.004	ENSGGOG00000011722	HNRNPUL2	73	38.309	Gorilla_gorilla
ENSGAFG00000016579	si:ch211-107m4.1	99	65.888	ENSHBUG00000013076	si:ch211-107m4.1	100	65.888	Haplochromis_burtoni
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	ENSHGLG00000003285	-	94	36.429	Heterocephalus_glaber_female
ENSGAFG00000016579	si:ch211-107m4.1	99	43.198	ENSIPUG00000009518	si:ch211-107m4.1	99	43.198	Ictalurus_punctatus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	ENSSTOG00000004327	-	66	41.683	Ictidomys_tridecemlineatus
ENSGAFG00000016579	si:ch211-107m4.1	71	39.749	ENSJJAG00000011206	Hnrnpul2	66	41.800	Jaculus_jaculus
ENSGAFG00000016579	si:ch211-107m4.1	99	67.762	ENSKMAG00000003651	si:ch211-107m4.1	99	67.762	Kryptolebias_marmoratus
ENSGAFG00000016579	si:ch211-107m4.1	78	69.444	ENSLACG00000009304	-	91	36.351	Latimeria_chalumnae
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSLAFG00000005377	-	87	36.611	Loxodonta_africana
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSMFAG00000041014	-	88	35.120	Macaca_fascicularis
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSMNEG00000036955	-	88	35.120	Macaca_nemestrina
ENSGAFG00000016579	si:ch211-107m4.1	99	62.290	ENSMAMG00000021489	si:ch211-107m4.1	99	62.290	Mastacembelus_armatus
ENSGAFG00000016579	si:ch211-107m4.1	99	65.217	ENSMZEG00005005136	si:ch211-107m4.1	100	65.217	Maylandia_zebra
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSMAUG00000013163	Hnrnpul2	72	37.660	Mesocricetus_auratus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSMICG00000009943	-	66	42.169	Microcebus_murinus
ENSGAFG00000016579	si:ch211-107m4.1	60	43.673	ENSMOCG00000020000	Hnrnpul2	84	43.220	Microtus_ochrogaster
ENSGAFG00000016579	si:ch211-107m4.1	75	71.463	ENSMALG00000011564	si:ch211-107m4.1	92	70.938	Monopterus_albus
ENSGAFG00000016579	si:ch211-107m4.1	78	38.104	MGP_CAROLIEiJ_G0022656	Hnrnpul2	72	37.248	Mus_caroli
ENSGAFG00000016579	si:ch211-107m4.1	78	38.298	ENSMUSG00000071659	Hnrnpul2	72	37.431	Mus_musculus
ENSGAFG00000016579	si:ch211-107m4.1	83	36.620	MGP_PahariEiJ_G0014151	Hnrnpul2	81	37.789	Mus_pahari
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	MGP_SPRETEiJ_G0023569	Hnrnpul2	68	41.373	Mus_spretus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSMPUG00000013707	-	65	42.084	Mustela_putorius_furo
ENSGAFG00000016579	si:ch211-107m4.1	71	41.423	ENSMLUG00000000412	-	66	42.549	Myotis_lucifugus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	ENSNGAG00000012005	Hnrnpul2	73	37.818	Nannospalax_galili
ENSGAFG00000016579	si:ch211-107m4.1	97	62.124	ENSNBRG00000000429	si:ch211-107m4.1	91	62.124	Neolamprologus_brichardi
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSNLEG00000004077	-	66	42.285	Nomascus_leucogenys
ENSGAFG00000016579	si:ch211-107m4.1	97	64.992	ENSONIG00000005422	si:ch211-107m4.1	100	64.373	Oreochromis_niloticus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.377	ENSOCUG00000009474	-	66	41.884	Oryctolagus_cuniculus
ENSGAFG00000016579	si:ch211-107m4.1	98	62.794	ENSORLG00000024574	si:ch211-107m4.1	99	63.275	Oryzias_latipes
ENSGAFG00000016579	si:ch211-107m4.1	98	62.031	ENSOMEG00000018153	si:ch211-107m4.1	99	62.031	Oryzias_melastigma
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	ENSOGAG00000003302	-	67	42.412	Otolemur_garnettii
ENSGAFG00000016579	si:ch211-107m4.1	71	41.213	ENSOARG00000016817	-	78	36.304	Ovis_aries
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSPPRG00000006380	-	66	42.084	Panthera_pardus
ENSGAFG00000016579	si:ch211-107m4.1	71	41.004	ENSPTRG00000034359	HNRNPUL2	73	38.309	Pan_troglodytes
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSPANG00000023745	-	98	35.897	Papio_anubis
ENSGAFG00000016579	si:ch211-107m4.1	71	40.167	ENSPEMG00000015546	Hnrnpul2	66	41.683	Peromyscus_maniculatus_bairdii
ENSGAFG00000016579	si:ch211-107m4.1	88	90.718	ENSPFOG00000008050	si:ch211-107m4.1	100	90.718	Poecilia_formosa
ENSGAFG00000016579	si:ch211-107m4.1	100	91.562	ENSPLAG00000003485	si:ch211-107m4.1	100	91.562	Poecilia_latipinna
ENSGAFG00000016579	si:ch211-107m4.1	100	92.344	ENSPMEG00000005490	si:ch211-107m4.1	100	92.344	Poecilia_mexicana
ENSGAFG00000016579	si:ch211-107m4.1	100	90.108	ENSPREG00000014973	si:ch211-107m4.1	100	90.108	Poecilia_reticulata
ENSGAFG00000016579	si:ch211-107m4.1	83	37.193	ENSPCAG00000010016	-	80	37.829	Procavia_capensis
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSPCOG00000013502	-	73	38.587	Propithecus_coquereli
ENSGAFG00000016579	si:ch211-107m4.1	71	41.300	ENSPVAG00000003475	-	67	41.847	Pteropus_vampyrus
ENSGAFG00000016579	si:ch211-107m4.1	84	36.268	ENSRNOG00000019507	Hnrnpul2	68	41.176	Rattus_norvegicus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSRBIG00000037820	-	88	35.120	Rhinopithecus_bieti
ENSGAFG00000016579	si:ch211-107m4.1	71	40.795	ENSRROG00000036561	-	88	35.120	Rhinopithecus_roxellana
ENSGAFG00000016579	si:ch211-107m4.1	78	71.795	ENSSFOG00015006544	si:ch211-107m4.1	60	71.795	Scleropages_formosus
ENSGAFG00000016579	si:ch211-107m4.1	99	64.496	ENSSMAG00000017226	si:ch211-107m4.1	99	65.161	Scophthalmus_maximus
ENSGAFG00000016579	si:ch211-107m4.1	99	66.967	ENSSPAG00000006972	si:ch211-107m4.1	99	67.117	Stegastes_partitus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.632	ENSSSCG00000028542	-	56	45.561	Sus_scrofa
ENSGAFG00000016579	si:ch211-107m4.1	99	52.844	ENSTRUG00000012843	si:ch211-107m4.1	99	52.844	Takifugu_rubripes
ENSGAFG00000016579	si:ch211-107m4.1	94	52.812	ENSTNIG00000000741	si:ch211-107m4.1	100	56.998	Tetraodon_nigroviridis
ENSGAFG00000016579	si:ch211-107m4.1	57	46.154	ENSTTRG00000002475	-	67	38.710	Tursiops_truncatus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSUAMG00000025971	-	66	41.683	Ursus_americanus
ENSGAFG00000016579	si:ch211-107m4.1	71	40.586	ENSVVUG00000029847	-	66	41.884	Vulpes_vulpes
ENSGAFG00000016579	si:ch211-107m4.1	74	37.626	ENSXETG00000006015	hnrnpul2	85	35.957	Xenopus_tropicalis
ENSGAFG00000016579	si:ch211-107m4.1	100	92.969	ENSXMAG00000003224	si:ch211-107m4.1	100	92.969	Xiphophorus_maculatus