EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSGAFG00000016637 (Gene tree)
Gene ID: -
Gene Symbol: gfi1ab
Alias: gfi1|gfi1.2|gfi1b
Full Name: growth factor independent 1A transcription repressor b
Gene Type: protein_coding
Species: Gambusia_affinis
Status: putative
Strand: Plus strand
Length: 4367 bases
Position: chrNHOQ01002838.1:524579-528945
Accession: ZDB-GENE-040116-8
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSGAFP00000024660	zf-C2H2	PF00096.26	6.8e-31	1	6
ENSGAFP00000024660	zf-C2H2	PF00096.26	6.8e-31	2	6
ENSGAFP00000024660	zf-C2H2	PF00096.26	6.8e-31	3	6
ENSGAFP00000024660	zf-C2H2	PF00096.26	6.8e-31	4	6
ENSGAFP00000024660	zf-C2H2	PF00096.26	6.8e-31	5	6
ENSGAFP00000024660	zf-C2H2	PF00096.26	6.8e-31	6	6
ENSGAFP00000024663	zf-C2H2	PF00096.26	6.8e-31	1	6
ENSGAFP00000024663	zf-C2H2	PF00096.26	6.8e-31	2	6
ENSGAFP00000024663	zf-C2H2	PF00096.26	6.8e-31	3	6
ENSGAFP00000024663	zf-C2H2	PF00096.26	6.8e-31	4	6
ENSGAFP00000024663	zf-C2H2	PF00096.26	6.8e-31	5	6
ENSGAFP00000024663	zf-C2H2	PF00096.26	6.8e-31	6	6
ENSGAFP00000024660	zf-met	PF12874.7	1.5e-07	1	1
ENSGAFP00000024663	zf-met	PF12874.7	1.5e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSGAFT00000024915	-	2783	-	ENSGAFP00000024660	391 (aa)	-	UPI000DD1D3CF
ENSGAFT00000024918	-	2681	-	ENSGAFP00000024663	391 (aa)	-	UPI000DD1D3CF

Gene Model

Click here to download ENSGAFG00000016637's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSGAFG00000016637's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSGAFG00000016637	gfi1ab	56	45.238	ENSGAFG00000007098	-	91	45.238
ENSGAFG00000016637	gfi1ab	63	41.358	ENSGAFG00000011999	-	99	40.559
ENSGAFG00000016637	gfi1ab	57	44.828	ENSGAFG00000008204	-	66	44.828
ENSGAFG00000016637	gfi1ab	55	42.177	ENSGAFG00000001402	-	75	43.671
ENSGAFG00000016637	gfi1ab	56	49.091	ENSGAFG00000018820	-	82	49.091
ENSGAFG00000016637	gfi1ab	50	40.367	ENSGAFG00000005337	-	87	37.566
ENSGAFG00000016637	gfi1ab	63	45.985	ENSGAFG00000008274	-	98	45.625
ENSGAFG00000016637	gfi1ab	50	45.714	ENSGAFG00000020499	-	63	45.714
ENSGAFG00000016637	gfi1ab	58	34.783	ENSGAFG00000003119	-	61	34.783
ENSGAFG00000016637	gfi1ab	65	38.095	ENSGAFG00000016322	-	71	38.095
ENSGAFG00000016637	gfi1ab	53	42.515	ENSGAFG00000016093	-	70	42.515
ENSGAFG00000016637	gfi1ab	74	44.643	ENSGAFG00000016976	-	79	44.643
ENSGAFG00000016637	gfi1ab	69	45.625	ENSGAFG00000014369	-	94	47.297
ENSGAFG00000016637	gfi1ab	51	46.296	ENSGAFG00000001481	-	79	46.491
ENSGAFG00000016637	gfi1ab	50	44.785	ENSGAFG00000018422	-	57	44.785
ENSGAFG00000016637	gfi1ab	100	59.069	ENSGAFG00000018063	GFI1	100	61.259
ENSGAFG00000016637	gfi1ab	50	42.202	ENSGAFG00000011174	-	62	41.964
ENSGAFG00000016637	gfi1ab	78	43.548	ENSGAFG00000013390	-	82	43.548
ENSGAFG00000016637	gfi1ab	58	39.375	ENSGAFG00000013457	-	65	39.375
ENSGAFG00000016637	gfi1ab	54	43.609	ENSGAFG00000021132	-	57	45.872
ENSGAFG00000016637	gfi1ab	50	40.556	ENSGAFG00000013006	-	70	40.556
ENSGAFG00000016637	gfi1ab	50	42.568	ENSGAFG00000012069	-	89	53.030
ENSGAFG00000016637	gfi1ab	56	40.972	ENSGAFG00000013019	-	80	41.212
ENSGAFG00000016637	gfi1ab	50	39.860	ENSGAFG00000013408	-	92	39.860

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSGAFG00000016637	gfi1ab	100	62.937	ENSG00000162676	GFI1	100	63.170	Homo_sapiens
ENSGAFG00000016637	gfi1ab	100	83.627	ENSAPOG00000015189	gfi1ab	100	83.627	Acanthochromis_polyacanthus
ENSGAFG00000016637	gfi1ab	100	81.633	ENSACIG00000016354	gfi1ab	100	81.633	Amphilophus_citrinellus
ENSGAFG00000016637	gfi1ab	100	73.671	ENSAOCG00000008339	gfi1ab	100	73.671	Amphiprion_ocellaris
ENSGAFG00000016637	gfi1ab	100	84.131	ENSAPEG00000023870	gfi1ab	100	84.131	Amphiprion_percula
ENSGAFG00000016637	gfi1ab	100	77.494	ENSATEG00000009167	gfi1ab	89	77.494	Anabas_testudineus
ENSGAFG00000016637	gfi1ab	86	65.156	ENSAPLG00000015700	GFI1	99	65.156	Anas_platyrhynchos
ENSGAFG00000016637	gfi1ab	100	63.592	ENSACAG00000004498	GFI1	100	64.320	Anolis_carolinensis
ENSGAFG00000016637	gfi1ab	100	62.326	ENSANAG00000019656	GFI1	100	62.791	Aotus_nancymaae
ENSGAFG00000016637	gfi1ab	100	85.166	ENSACLG00000026458	gfi1ab	93	85.166	Astatotilapia_calliptera
ENSGAFG00000016637	gfi1ab	100	53.453	ENSAMXG00000006669	GFI1	100	53.453	Astyanax_mexicanus
ENSGAFG00000016637	gfi1ab	100	64.516	ENSAMXG00000039600	gfi1ab	100	64.516	Astyanax_mexicanus
ENSGAFG00000016637	gfi1ab	100	60.187	ENSBTAG00000016723	GFI1	100	62.383	Bos_taurus
ENSGAFG00000016637	gfi1ab	100	62.238	ENSCJAG00000017609	GFI1	100	62.471	Callithrix_jacchus
ENSGAFG00000016637	gfi1ab	100	60.606	ENSCAFG00000020155	GFI1	100	61.538	Canis_familiaris
ENSGAFG00000016637	gfi1ab	100	61.072	ENSCAFG00020013371	GFI1	88	61.538	Canis_lupus_dingo
ENSGAFG00000016637	gfi1ab	100	59.861	ENSCHIG00000016135	GFI1	100	62.150	Capra_hircus
ENSGAFG00000016637	gfi1ab	100	61.290	ENSCPOG00000011727	GFI1	100	61.982	Cavia_porcellus
ENSGAFG00000016637	gfi1ab	100	61.538	ENSCCAG00000036072	GFI1	100	61.305	Cebus_capucinus
ENSGAFG00000016637	gfi1ab	100	62.937	ENSCATG00000037873	GFI1	100	63.170	Cercocebus_atys
ENSGAFG00000016637	gfi1ab	100	64.865	ENSCLAG00000005915	GFI1	100	59.864	Chinchilla_lanigera
ENSGAFG00000016637	gfi1ab	98	57.682	ENSCSAG00000001469	GFI1	100	57.951	Chlorocebus_sabaeus
ENSGAFG00000016637	gfi1ab	100	63.170	ENSCANG00000034077	GFI1	100	63.403	Colobus_angolensis_palliatus
ENSGAFG00000016637	gfi1ab	100	60.185	ENSCGRG00001015432	Gfi1	100	60.417	Cricetulus_griseus_chok1gshd
ENSGAFG00000016637	gfi1ab	100	61.347	ENSCSEG00000017729	GFI1	100	61.596	Cynoglossus_semilaevis
ENSGAFG00000016637	gfi1ab	100	88.491	ENSCVAG00000011828	gfi1ab	100	88.491	Cyprinodon_variegatus
ENSGAFG00000016637	gfi1ab	100	58.313	ENSCVAG00000004930	GFI1	100	60.291	Cyprinodon_variegatus
ENSGAFG00000016637	gfi1ab	100	70.149	ENSDARG00000044457	gfi1ab	100	70.149	Danio_rerio
ENSGAFG00000016637	gfi1ab	100	60.829	ENSDNOG00000000782	GFI1	97	61.751	Dasypus_novemcinctus
ENSGAFG00000016637	gfi1ab	100	79.570	ENSEBUG00000008075	gfi1ab	62	79.570	Eptatretus_burgeri
ENSGAFG00000016637	gfi1ab	100	62.441	ENSEASG00005015509	GFI1	86	62.676	Equus_asinus_asinus
ENSGAFG00000016637	gfi1ab	98	53.367	ENSECAG00000006647	GFI1	94	54.115	Equus_caballus
ENSGAFG00000016637	gfi1ab	100	60.563	ENSEEUG00000000198	GFI1	100	60.798	Erinaceus_europaeus
ENSGAFG00000016637	gfi1ab	100	72.525	ENSELUG00000003015	gfi1ab	99	72.525	Esox_lucius
ENSGAFG00000016637	gfi1ab	51	57.346	ENSELUG00000006948	-	62	57.346	Esox_lucius
ENSGAFG00000016637	gfi1ab	100	61.634	ENSELUG00000019033	GFI1	100	61.881	Esox_lucius
ENSGAFG00000016637	gfi1ab	100	61.305	ENSFCAG00000005914	GFI1	100	61.860	Felis_catus
ENSGAFG00000016637	gfi1ab	100	91.304	ENSFHEG00000010997	gfi1ab	100	91.304	Fundulus_heteroclitus
ENSGAFG00000016637	gfi1ab	100	63.054	ENSFHEG00000000341	GFI1	100	63.300	Fundulus_heteroclitus
ENSGAFG00000016637	gfi1ab	100	73.367	ENSGMOG00000007737	gfi1ab	100	73.367	Gadus_morhua
ENSGAFG00000016637	gfi1ab	100	64.734	ENSGALG00000043650	GFI1	100	64.976	Gallus_gallus
ENSGAFG00000016637	gfi1ab	100	81.330	ENSGACG00000004257	gfi1ab	97	81.586	Gasterosteus_aculeatus
ENSGAFG00000016637	gfi1ab	100	62.937	ENSGGOG00000005320	GFI1	100	63.170	Gorilla_gorilla
ENSGAFG00000016637	gfi1ab	100	82.653	ENSHBUG00000011969	gfi1ab	100	82.653	Haplochromis_burtoni
ENSGAFG00000016637	gfi1ab	100	62.850	ENSHGLG00000008020	GFI1	100	63.357	Heterocephalus_glaber_female
ENSGAFG00000016637	gfi1ab	100	62.850	ENSHGLG00100000610	GFI1	100	63.357	Heterocephalus_glaber_male
ENSGAFG00000016637	gfi1ab	100	61.889	ENSHCOG00000019555	GFI1	100	61.889	Hippocampus_comes
ENSGAFG00000016637	gfi1ab	100	62.619	ENSHCOG00000008590	gfi1ab	100	62.619	Hippocampus_comes
ENSGAFG00000016637	gfi1ab	100	59.268	ENSIPUG00000013414	GFI1	100	59.268	Ictalurus_punctatus
ENSGAFG00000016637	gfi1ab	100	65.239	ENSIPUG00000010071	gfi1ab	87	65.491	Ictalurus_punctatus
ENSGAFG00000016637	gfi1ab	100	61.882	ENSSTOG00000014583	GFI1	100	62.353	Ictidomys_tridecemlineatus
ENSGAFG00000016637	gfi1ab	100	83.120	ENSKMAG00000003810	gfi1ab	100	83.120	Kryptolebias_marmoratus
ENSGAFG00000016637	gfi1ab	100	82.828	ENSLBEG00000027776	gfi1ab	100	82.828	Labrus_bergylta
ENSGAFG00000016637	gfi1ab	99	44.246	ENSLACG00000017590	-	99	42.092	Latimeria_chalumnae
ENSGAFG00000016637	gfi1ab	100	65.770	ENSLACG00000013362	GFI1	98	65.770	Latimeria_chalumnae
ENSGAFG00000016637	gfi1ab	100	69.307	ENSLOCG00000004711	gfi1ab	100	69.554	Lepisosteus_oculatus
ENSGAFG00000016637	gfi1ab	100	60.664	ENSLAFG00000018346	GFI1	100	61.321	Loxodonta_africana
ENSGAFG00000016637	gfi1ab	100	62.937	ENSMFAG00000045801	GFI1	100	63.170	Macaca_fascicularis
ENSGAFG00000016637	gfi1ab	100	62.937	ENSMNEG00000036338	GFI1	100	63.170	Macaca_nemestrina
ENSGAFG00000016637	gfi1ab	100	62.937	ENSMLEG00000036181	GFI1	100	63.170	Mandrillus_leucophaeus
ENSGAFG00000016637	gfi1ab	100	83.120	ENSMAMG00000008125	gfi1ab	100	83.120	Mastacembelus_armatus
ENSGAFG00000016637	gfi1ab	100	85.422	ENSMZEG00005009895	gfi1ab	100	85.422	Maylandia_zebra
ENSGAFG00000016637	gfi1ab	86	66.193	ENSMGAG00000008187	GFI1	99	66.477	Meleagris_gallopavo
ENSGAFG00000016637	gfi1ab	100	61.163	ENSMICG00000047208	GFI1	100	61.628	Microcebus_murinus
ENSGAFG00000016637	gfi1ab	100	72.980	ENSMMOG00000005556	gfi1ab	100	72.980	Mola_mola
ENSGAFG00000016637	gfi1ab	100	58.676	ENSMODG00000011802	GFI1	100	62.207	Monodelphis_domestica
ENSGAFG00000016637	gfi1ab	100	79.795	ENSMALG00000014672	gfi1ab	100	79.795	Monopterus_albus
ENSGAFG00000016637	gfi1ab	100	59.954	MGP_CAROLIEiJ_G0027508	Gfi1	100	97.778	Mus_caroli
ENSGAFG00000016637	gfi1ab	100	59.722	ENSMUSG00000029275	Gfi1	100	60.417	Mus_musculus
ENSGAFG00000016637	gfi1ab	100	59.954	MGP_PahariEiJ_G0017280	Gfi1	100	97.778	Mus_pahari
ENSGAFG00000016637	gfi1ab	100	59.954	MGP_SPRETEiJ_G0028507	Gfi1	100	60.648	Mus_spretus
ENSGAFG00000016637	gfi1ab	100	65.664	ENSMPUG00000004178	GFI1	97	65.829	Mustela_putorius_furo
ENSGAFG00000016637	gfi1ab	100	60.698	ENSMLUG00000015191	GFI1	97	61.163	Myotis_lucifugus
ENSGAFG00000016637	gfi1ab	100	82.323	ENSNBRG00000015774	gfi1ab	100	82.323	Neolamprologus_brichardi
ENSGAFG00000016637	gfi1ab	86	65.041	ENSNLEG00000010470	GFI1	91	65.312	Nomascus_leucogenys
ENSGAFG00000016637	gfi1ab	100	60.970	ENSOPRG00000001473	GFI1	100	62.238	Ochotona_princeps
ENSGAFG00000016637	gfi1ab	100	84.910	ENSONIG00000019246	gfi1ab	100	84.910	Oreochromis_niloticus
ENSGAFG00000016637	gfi1ab	98	53.846	ENSOCUG00000023553	GFI1	93	55.438	Oryctolagus_cuniculus
ENSGAFG00000016637	gfi1ab	100	78.772	ENSORLG00000013806	gfi1ab	100	78.772	Oryzias_latipes
ENSGAFG00000016637	gfi1ab	100	62.000	ENSORLG00000005060	GFI1	100	62.250	Oryzias_latipes
ENSGAFG00000016637	gfi1ab	100	55.164	ENSORLG00020002817	GFI1	100	55.164	Oryzias_latipes_hni
ENSGAFG00000016637	gfi1ab	100	79.028	ENSORLG00020001602	gfi1ab	100	79.028	Oryzias_latipes_hni
ENSGAFG00000016637	gfi1ab	100	58.750	ENSORLG00015006070	GFI1	100	61.250	Oryzias_latipes_hsok
ENSGAFG00000016637	gfi1ab	100	60.697	ENSOMEG00000016722	GFI1	100	61.692	Oryzias_melastigma
ENSGAFG00000016637	gfi1ab	100	64.736	ENSOGAG00000027913	GFI1	100	64.987	Otolemur_garnettii
ENSGAFG00000016637	gfi1ab	100	63.659	ENSPPAG00000042186	GFI1	100	63.910	Pan_paniscus
ENSGAFG00000016637	gfi1ab	100	61.305	ENSPPRG00000007521	GFI1	100	61.860	Panthera_pardus
ENSGAFG00000016637	gfi1ab	100	62.937	ENSPTRG00000043053	GFI1	100	62.704	Pan_troglodytes
ENSGAFG00000016637	gfi1ab	100	62.937	ENSPANG00000016433	GFI1	100	63.170	Papio_anubis
ENSGAFG00000016637	gfi1ab	100	70.617	ENSPKIG00000004263	GFI1	100	70.617	Paramormyrops_kingsleyae
ENSGAFG00000016637	gfi1ab	86	66.382	ENSPSIG00000008734	GFI1	96	66.667	Pelodiscus_sinensis
ENSGAFG00000016637	gfi1ab	100	74.555	ENSPMGG00000012546	gfi1ab	100	74.809	Periophthalmus_magnuspinnatus
ENSGAFG00000016637	gfi1ab	99	92.262	ENSPMGG00000011041	GFI1	99	92.262	Periophthalmus_magnuspinnatus
ENSGAFG00000016637	gfi1ab	100	61.628	ENSPCIG00000013728	GFI1	100	62.648	Phascolarctos_cinereus
ENSGAFG00000016637	gfi1ab	100	96.931	ENSPFOG00000023214	gfi1ab	100	96.931	Poecilia_formosa
ENSGAFG00000016637	gfi1ab	100	96.931	ENSPLAG00000010879	gfi1ab	100	96.931	Poecilia_latipinna
ENSGAFG00000016637	gfi1ab	100	61.111	ENSPLAG00000005376	GFI1	91	61.353	Poecilia_latipinna
ENSGAFG00000016637	gfi1ab	100	60.976	ENSPMEG00000019299	GFI1	100	61.463	Poecilia_mexicana
ENSGAFG00000016637	gfi1ab	100	97.187	ENSPMEG00000013694	gfi1ab	100	97.187	Poecilia_mexicana
ENSGAFG00000016637	gfi1ab	100	96.419	ENSPREG00000014097	gfi1ab	100	96.419	Poecilia_reticulata
ENSGAFG00000016637	gfi1ab	100	55.754	ENSPREG00000007997	GFI1	100	56.010	Poecilia_reticulata
ENSGAFG00000016637	gfi1ab	100	51.515	ENSPCAG00000011020	GFI1	100	51.515	Procavia_capensis
ENSGAFG00000016637	gfi1ab	100	61.628	ENSPCOG00000020540	GFI1	100	62.093	Propithecus_coquereli
ENSGAFG00000016637	gfi1ab	100	61.737	ENSPVAG00000006928	GFI1	100	62.353	Pteropus_vampyrus
ENSGAFG00000016637	gfi1ab	100	85.166	ENSPNYG00000021183	gfi1ab	100	85.166	Pundamilia_nyererei
ENSGAFG00000016637	gfi1ab	100	65.337	ENSPNAG00000027258	gfi1ab	100	65.337	Pygocentrus_nattereri
ENSGAFG00000016637	gfi1ab	100	65.432	ENSPNAG00000014299	-	97	65.432	Pygocentrus_nattereri
ENSGAFG00000016637	gfi1ab	100	57.463	ENSPNAG00000028014	GFI1	100	57.463	Pygocentrus_nattereri
ENSGAFG00000016637	gfi1ab	100	59.954	ENSRNOG00000002042	Gfi1	100	60.185	Rattus_norvegicus
ENSGAFG00000016637	gfi1ab	100	63.170	ENSRBIG00000036467	GFI1	100	63.636	Rhinopithecus_bieti
ENSGAFG00000016637	gfi1ab	100	63.170	ENSRROG00000031687	GFI1	100	63.636	Rhinopithecus_roxellana
ENSGAFG00000016637	gfi1ab	100	62.238	ENSSBOG00000031300	GFI1	100	61.538	Saimiri_boliviensis_boliviensis
ENSGAFG00000016637	gfi1ab	100	70.762	ENSSFOG00015020295	gfi1	100	70.762	Scleropages_formosus
ENSGAFG00000016637	gfi1ab	99	44.118	ENSSFOG00015008114	-	98	41.176	Scleropages_formosus
ENSGAFG00000016637	gfi1ab	100	79.747	ENSSMAG00000002782	gfi1ab	100	79.747	Scophthalmus_maximus
ENSGAFG00000016637	gfi1ab	100	80.307	ENSSDUG00000022410	gfi1ab	100	80.563	Seriola_dumerili
ENSGAFG00000016637	gfi1ab	100	80.563	ENSSLDG00000020163	gfi1ab	100	80.818	Seriola_lalandi_dorsalis
ENSGAFG00000016637	gfi1ab	80	88.235	ENSSPAG00000009140	gfi1ab	100	88.235	Stegastes_partitus
ENSGAFG00000016637	gfi1ab	100	62.937	ENSSSCG00000006902	GFI1	100	65.238	Sus_scrofa
ENSGAFG00000016637	gfi1ab	86	66.571	ENSTGUG00000006060	GFI1	99	66.857	Taeniopygia_guttata
ENSGAFG00000016637	gfi1ab	100	76.276	ENSTRUG00000000415	gfi1ab	100	76.276	Takifugu_rubripes
ENSGAFG00000016637	gfi1ab	100	74.809	ENSTNIG00000000651	gfi1ab	97	74.809	Tetraodon_nigroviridis
ENSGAFG00000016637	gfi1ab	100	61.737	ENSTTRG00000000082	GFI1	100	62.676	Tursiops_truncatus
ENSGAFG00000016637	gfi1ab	100	62.954	ENSUAMG00000021124	GFI1	91	63.680	Ursus_americanus
ENSGAFG00000016637	gfi1ab	100	62.195	ENSXETG00000023006	gfi1	98	62.439	Xenopus_tropicalis
ENSGAFG00000016637	gfi1ab	100	96.931	ENSXMAG00000010523	gfi1ab	100	96.931	Xiphophorus_maculatus
ENSGAFG00000016637	gfi1ab	86	54.958	ENSXMAG00000009274	GFI1	70	55.742	Xiphophorus_maculatus